mRNA_Ecto-sp13_S_contig13379.2699.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: A0A6H5JCY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY0_9PHAE) HSP 1 Score: 474 bits (1219), Expect = 3.590e-154 Identity = 258/303 (85.15%), Postives = 265/303 (87.46%), Query Frame = 1
Query: 4 EPPNLKRQSLRFPPVTHQWSGGHCGRFSSDSIPLPARLPTPDPLVEDNLVSAKKTSQALTPRPPPTDPLVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPPFLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLFGVPQANKPSAVVACVPTAMKVPEIGPNGEESTEAMELSEEDVVAAFVEGVNEEV 912
EPPNLKRQSLRFPPVTHQWSGGH ++ LP +P V K PR D L+QAFSLHVFAKRPIEPI SLGDFRRAIMKRIALAALQIRLSVNSRKDPPFLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLT+GEL RFSSALLTDARQLAAQGNRISNSEQ LNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLFGVPQANKPSAVVACVPTAMKVP IGPNGEESTEAMELSEEDVVAAF+EGVNEE+
Sbjct: 502 EPPNLKRQSLRFPPVTHQWSGGHVTERNT--------LPVMEP------VDGKPLG---VPRFYKHD-LLQAFSLHVFAKRPIEPITSLGDFRRAIMKRIALAALQIRLSVNSRKDPPFLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTSGELKRFSSALLTDARQLAAQGNRISNSEQ-LNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLFGVPQANKPSAVVACVPTAMKVPAIGPNGEESTEAMELSEEDVVAAFIEGVNEEI 785
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: A0A836C760_9STRA (Stromal processing peptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C760_9STRA) HSP 1 Score: 347 bits (889), Expect = 6.180e-108 Identity = 188/302 (62.25%), Postives = 225/302 (74.50%), Query Frame = 1
Query: 7 PPNLKRQSLRFPPVTHQWSGGHCGRFSSDSIPLPARLPTPDPLVEDNLVSAKKTSQALTPRPPPTDPLVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPPFLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLFGVPQANKPSAVVACVPTAMKVPEIGPNGEESTEAMELSEEDVVAAFVEGVNEEV 912
P LK QS FPPVTH WSGGH ++ LP D L + + S L +QAFS+HVFAKRPIEP+ SLGD RRA+MKRIALAALQIRLSVNSR DPPF +EFNQLDSPREGCAVC+LDMTA+PA+W++AV+ AVRE+RRLGM+GLT GELTRFSSALLTDA+QLAAQG+RISNSEQ L FLM++VAS HTFMD +QTY ATRLV+ESLTL E+NEVAAE+CEHITL+GVP +PSAVVACVP+ +++ +L E+ +V A +EGV+EE+
Sbjct: 242 PITLKHQSKHFPPVTHVWSGGHVTEANT--------LPVMDTFDGKPLHAPRLFSHDL----------LQAFSMHVFAKRPIEPVTSLGDLRRAVMKRIALAALQIRLSVNSRTDPPFSMIEFNQLDSPREGCAVCYLDMTADPARWREAVRVAVREIRRLGMYGLTVGELTRFSSALLTDAQQLAAQGDRISNSEQ-LTFLMESVASDHTFMDAQQTYEATRLVVESLTLGEVNEVAAEICEHITLYGVPGGPQPSAVVACVPS-----------KDTQGTAQLDEDQLVEAIMEGVSEEI 513
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: W7U2D5_9STRA (Peptidase M16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2D5_9STRA) HSP 1 Score: 269 bits (688), Expect = 1.850e-78 Identity = 145/270 (53.70%), Postives = 188/270 (69.63%), Query Frame = 1
Query: 1 QEPPNLKRQSLRFPPVTHQWSGGHCGRFSSDSIPLPARLPTPDPLVEDNLVSAKKTSQA---LTPRPPPTDPLVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPPFLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLFGVPQANKPSAVVACVPT 801
QEPP LK QS FPPVTH +SGG RF+ S+P + P + VS K A LTPR + +QAFS H+FAKRPIE + +L D+RR++MKRIA+ ALQIRL+V +R DPPF +EFNQLDS RE CAVC LD+ AEP KW+ AV AVRE+RRLGM+GL+ EL R+ +A+L D+ Q AAQG RISNS+Q LN LM+++A GH FM+ Q A LV++S+T+EE+NEVAAE+C+H+T + ++ PSA VA P+
Sbjct: 396 QEPPTLKLQSRHFPPVTHYFSGGKFDRFADASLPAELKTFGRSPRTSEESVSDKADGNAARDLTPRIFQHEN-IQAFSFHLFAKRPIEAVQTLADYRRSVMKRIAILALQIRLNVLARDDPPFTFIEFNQLDSAREACAVCNLDVLAEPEKWEKAVSLAVREIRRLGMYGLSESELNRYITAMLRDSTQHAAQGERISNSDQ-LNQLMESIACGHVFMEPTQQCDAVELVLKSITVEEVNEVAAEICQHLTDYASGASSPPSACVATCPS 663
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: A0A7S2VA48_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VA48_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.640e-68 Identity = 121/207 (58.45%), Postives = 161/207 (77.78%), Query Frame = 1
Query: 208 LVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPP-FLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLFG--VPQANKPSAVVACVPTAMKVPE 819
L+QAFSLH+FAKRP+E I L FRR++ +R+ALAALQIRL+V R D P F VEFNQLDS REGCAVC LDMTAEPA+WKDA+ ++ E+R+LG++G+T GE+ R++S+L+TDA QLAAQG+RIS+ +Q L++LM+TVA+GHTFM Q+YH T + SLTLEE+N+ AAELC H+T F + P+ VVAC+P ++ P+
Sbjct: 160 LLQAFSLHLFAKRPVEEIIDLDSFRRSMARRVALAALQIRLNVGGRSDDPAFTFVEFNQLDSAREGCAVCSLDMTAEPARWKDAICKSLAEIRKLGLYGVTPGEMERYASSLMTDAEQLAAQGDRISHGDQ-LSYLMETVANGHTFMSPMQSYHMTAKALSSLTLEEVNKAAAELCAHVTGFHKEAEAVDGPTIVVACMPKGVEDPD 365
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: A0A7S4HUK7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HUK7_9STRA) HSP 1 Score: 237 bits (604), Expect = 4.280e-67 Identity = 135/270 (50.00%), Postives = 179/270 (66.30%), Query Frame = 1
Query: 25 QSLRFPPVTHQWSGGHCGRFSSDSIPLPAR-------LPTPDPLVED-NLVSAKKTSQALTPRPPP-TDPLVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPP-FLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLFGVPQANKPSAVVA--CVP 798
QS +PPV H W DS+ P + L P PL ++ + + + +Q RP L+QAFSLH+FAKRP+E I L FRR++ +RIALAALQIRL+V R D P F VEFNQLDS REGCAVC LD+TAEPA+WKDA+ ++ E+R+LG++G+T+GE+ R++ +L+TDA QLAAQG+ IS+ +Q L +LM+TVA+GHTFM EQ+Y T + +LTLEE+N+ AAELC HIT +A VVA CVP
Sbjct: 358 QSWHYPPVRHDWCVPAGAPVEVDSLIEPEQVIDYDIHLQEPYPLDDEVDFLKTDELAQGKKIRPHIFRHELLQAFSLHLFAKRPVEAITDLASFRRSLARRIALAALQIRLNVGGRSDDPAFTFVEFNQLDSAREGCAVCSLDLTAEPARWKDAICKSLSEIRKLGVYGVTHGEMERYAGSLMTDAEQLAAQGDMISHGDQ-LAYLMETVANGHTFMSPEQSYDMTANALSTLTLEEVNDAAAELCSHITSLSDGEAGPDGVVVATACVP 626
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: A0A7S2EV96_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EV96_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.370e-66 Identity = 136/266 (51.13%), Postives = 176/266 (66.17%), Query Frame = 1
Query: 28 SLRFPPVTHQW--SGGHCGRFSSDSIPLP--ARLPTPDPLVED-NLVSAKKTSQALTPRPPP-TDPLVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPP-FLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLF--GVPQANKPSAVVACVP 798
S +PPV H W S G G P+ L PL E + +S ++ + RP L+QAFSLH+FAKRP+EPI L FRR++ +R+ALAALQIRL+V R D P F VEFNQLDS REGCAV LDMTAEP +WK+A+ ++ E+R+LG++G+T GE+ R++SAL+TDA QLAAQG+RIS+ +Q L +LM+TVA+GHTFM EQ+Y+ T + SLTLEE+NE A ELC H+T G A P VAC P
Sbjct: 115 SWHYPPVRHDWCVSPGKLGELEGMEKPIDYDIHLQESYPLDEKVDFLSTEEVAPGKKIRPHIFRHELLQAFSLHLFAKRPVEPITDLPSFRRSLARRVALAALQIRLNVGGRSDDPAFTFVEFNQLDSAREGCAVNSLDMTAEPHRWKEAICKSLSEIRKLGIYGVTPGEMERYASALMTDAEQLAAQGDRISHGDQ-LAYLMETVANGHTFMSPEQSYYMTAKALSSLTLEEVNEAAKELCSHVTGLKEGSDGAEGPLIAVACSP 379
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: A0A7R9U8H0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8H0_9STRA) HSP 1 Score: 233 bits (595), Expect = 5.690e-66 Identity = 126/277 (45.49%), Postives = 174/277 (62.82%), Query Frame = 1
Query: 25 QSLRFPPVTHQWSGGHCGRFSSDSIPLPARLPTPDPLVEDNLVSAKKTSQALTPRPPPT--------DPLVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPPFLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLFGVPQANK---------PSAVVACVPTA 804
QS FPPV H W+ +P + PD L+ N LTP+P L+Q FS H+FAKRP+EP+ ++ F+RAI+KR+A+AALQIRL+VN+R DPPF VEFNQLDSPREG AVC LD+ E ++W++A+ V E+RR FGL+ GEL R+ A++ D+ Q AQG+RI+N++Q L LM++VA GHTFMD EQ+Y AT V+ S+TL+E+N +A E+CEH G+ +A + P+++ ACVP A
Sbjct: 322 QSKHFPPVVHDWTMSE----------IPPGIKLPDSLL--NSAKIMPDPSVLTPKPRNVADRTKMFYHELLQGFSFHLFAKRPVEPVTTMAAFKRAILKRVAIAALQIRLNVNARSDPPFTYVEFNQLDSPREGSAVCSLDLMGEVSRWQEAITMVVCEIRRFATFGLSQGELDRYLVAMIADSAQNRAQGDRINNADQ-LQLLMESVACGHTFMDAEQSYRATEAVVRSITLDEINAMAHEICEHF--LGLCEAGQEGTDSPAVLPASITACVPAA 583
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: A0A1Z5KE45_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE45_FISSO) HSP 1 Score: 232 bits (592), Expect = 1.760e-65 Identity = 131/277 (47.29%), Postives = 180/277 (64.98%), Query Frame = 1
Query: 22 RQSLRFPPVTHQWSGGHCGRFSSDSI-PLPARLPTPDPLVEDNLVSAKKTSQALTPRPPPTD----PLVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPP-FLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLF--GVPQANKPSAVVACVPTAMKVPEIGP 828
+QS +PPV H WS + + PL + DP D+ V +T + + L+QAFSLH+FAKRP+EPI L F+R++ +R+ALAALQIRL+V R D P F VEFNQLDS REGCAVC LD+TAEP +W+DA+ +V E+R+LG++G+T GE+ R++S+L+TDA QLAAQG+RISN +Q L++LM+TVA+GHTFM Q+Y T + ++T+E++N AAELC HIT P+ V+AC P +PE P
Sbjct: 355 QQSWHYPPVRHDWSILADHKVDDMPVKPLDYDIHLQDPYPLDDKVDLLETCEVAPGKEIRPHIFRHELLQAFSLHLFAKRPVEPIVDLKSFQRSLARRVALAALQIRLNVGGRSDDPAFTFVEFNQLDSAREGCAVCSLDLTAEPHRWRDAICKSVSEIRKLGLYGVTPGEMERYASSLMTDAEQLAAQGDRISNGDQ-LSYLMETVANGHTFMSPMQSYQMTARALSTMTVEQVNAAAAELCSHITSMHKDADPMKGPAIVIACTPKG--IPEDDP 628
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: B5Y4R1_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4R1_PHATC) HSP 1 Score: 230 bits (587), Expect = 4.290e-65 Identity = 115/204 (56.37%), Postives = 155/204 (75.98%), Query Frame = 1
Query: 208 LVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPP-FLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLF--GVPQANKPSAVVACVPTAMK 810
L+QAFSLH+FAKRP+E I L FRR++ +R+ALAALQIRL+V R D P F VEFNQLDS REGCAVC LD+T+EPA+WKDA+ +V E+R+LG++G+T GE+ R++S+L+TDA QLAAQG+RIS+ +Q L++LM+TVA+GHTFM Q+YH T + ++TLE++NE AAELC H++ G + P +AC P K
Sbjct: 275 LLQAFSLHLFAKRPVEEIVDLDGFRRSMARRVALAALQIRLNVGGRSDDPAFTFVEFNQLDSAREGCAVCSLDLTSEPARWKDAIGKSVSEIRKLGLYGVTPGEMERYASSLMTDAEQLAAQGDRISHGDQ-LSYLMETVANGHTFMSPMQSYHMTAKALSTMTLEDVNEAAAELCSHVSSIHDGAEASEGPIIAIACTPKGPK 477
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Match: A0A7S4EKG3_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A7S4EKG3_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.620e-64 Identity = 131/273 (47.99%), Postives = 177/273 (64.84%), Query Frame = 1
Query: 25 QSLRFPPVTHQWSGGHCGRFSSDSIP---LPAR-------LPTPDPLVED-NLVSAKKTSQALTPRPPP-TDPLVQAFSLHVFAKRPIEPINSLGDFRRAIMKRIALAALQIRLSVNSRKDPP-FLSVEFNQLDSPREGCAVCFLDMTAEPAKWKDAVKFAVREVRRLGMFGLTNGELTRFSSALLTDARQLAAQGNRISNSEQQLNFLMDTVASGHTFMDTEQTYHATRLVIESLTLEELNEVAAELCEHITLF--GVPQANKPSAVVACVP 798
QS +PPV H W C D P +PA+ L PL E N + A++ + RP L+Q+FSLH F+KRP+EPI + FR+++ +R+ALAALQIRL+V R D P F VEFNQLDS REGCAVC LDMTAEP KWK+A+ ++ E+R+LG+ G+T GE+ R++S+L+TD QLAAQG+RIS+ +Q L++LM+TVA+ HTFM EQ+YH T + SLT+E++N+ AAELC H+T G P +AC P
Sbjct: 362 QSWHYPPVRHDW----CTPVDQDIDPKLIIPAKGLKYDLQLQESYPLDEKTNFLKAEEVAPGKGIRPHIFRHELLQSFSLHFFSKRPVEPIVDIDSFRKSLARRVALAALQIRLNVGGRSDDPAFTFVEFNQLDSAREGCAVCSLDMTAEPHKWKEAIHKSLSEIRKLGVHGVTMGEMERYASSLMTDGEQLAAQGDRISHGDQ-LSYLMETVANRHTFMSPEQSYHMTAKALSSLTIEDVNDAAAELCSHVTALKDGELPLRGPVIAIACTP 629 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13379.2699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13379.2699.1 >prot_Ecto-sp13_S_contig13379.2699.1 ID=prot_Ecto-sp13_S_contig13379.2699.1|Name=mRNA_Ecto-sp13_S_contig13379.2699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=308bp QEPPNLKRQSLRFPPVTHQWSGGHCGRFSSDSIPLPARLPTPDPLVEDNLback to top mRNA from alignment at Ecto-sp13_S_contig13379:1084..4414+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13379.2699.1 ID=mRNA_Ecto-sp13_S_contig13379.2699.1|Name=mRNA_Ecto-sp13_S_contig13379.2699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3331bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13379:1084..4414+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13379:1084..4414+ >mRNA_Ecto-sp13_S_contig13379.2699.1 ID=mRNA_Ecto-sp13_S_contig13379.2699.1|Name=mRNA_Ecto-sp13_S_contig13379.2699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=924bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13379:1084..4414+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |