mRNA_Ecto-sp13_S_contig13378.2698.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A6H5KMP7_9PHAE (Ricin B-type lectin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMP7_9PHAE) HSP 1 Score: 172 bits (435), Expect = 5.350e-48 Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 1
Query: 1 FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVKAKDEEGFTPLLNAGNFEEVASFLVESGADPNDVYTDD 267
F+ QLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADV+AKDEEGFTPLLNAGNFEEVASFLVESGADPNDVYTDD
Sbjct: 537 FLEQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVRAKDEEGFTPLLNAGNFEEVASFLVESGADPNDVYTDD 625
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A7R9U5G3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5G3_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.080e-21 Identity = 52/91 (57.14%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 1 FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVKAKDEEGFTPLLNA--GNFEEVASFLVESGADPNDVYTDD 267
++ Q+A+ IADG E+ + H+D VTALMVAA GGH VVK+L+E ADV A DEE +TPLLNA GN ++A+ LVE GA+PNDV+ DD
Sbjct: 529 YIDQIAKAIADGSEDV---EPHKDGVTALMVAALGGHTEVVKMLLEAEADVTAADEENWTPLLNAVKGNHADLAALLVEHGANPNDVFVDD 616
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A7S1FMT5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMT5_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.650e-19 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
Query: 1 FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVKAKDEEGFTPLLNA--GNFEEVASFLVESGADPNDVYTDD 267
++ +A+ IADG EE + H D VTA+ VAA GGH VK L+E GADVKAKD+E PL+NA GN+ ++AS LVE+GADPN+ Y D+
Sbjct: 571 YIDGVAKAIADGKEEV---EPHVDGVTAIHVAAMGGHLKCVKSLIEAGADVKAKDDEDKGPLMNAVKGNYGDIASLLVENGADPNETYVDE 658
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A8J9T9S8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T9S8_PHATR) HSP 1 Score: 78.6 bits (192), Expect = 4.940e-17 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 1 FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVKAKDEEGFTPLLNA--GNFEEVASFLVESGADPNDVYTDD 267
++V+L + I +G + D+ H D VTAL VAAQGGH A V+ LVE GA++ +DEE T LL A GN EVAS LV GADPN Y DD
Sbjct: 17 YLVKLKKMIEEGTAQE--DEPHVDGVTALHVAAQGGHLATVEALVEAGANIGIQDEENRTSLLMAIKGNHGEVASALVRGGADPNTPYVDD 105
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A6U3Q8H2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8H2_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.200e-14 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 1 FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVKAKDEEGFTPLLNA--GNFEEVASFLVESGADPNDVYTDD 267
++ +LA+ I +G E T D H D VTA+ VAAQGGH VK LV GADV D+E +PLL + GNF EVA+ LV +GADPN VY D+
Sbjct: 574 YLEKLAKMIEEGTVEET--DPHVDGVTAVHVAAQGGHLECVKHLVAAGADVTILDDEERSPLLLSVKGNFGEVATELVRAGADPNTVYVDE 662
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A1Z5JTF5_FISSO (Ankyrin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTF5_FISSO) HSP 1 Score: 77.0 bits (188), Expect = 1.640e-14 Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 1 FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGAD-VKAKDEEGFTPLLNA--GNFEEVASFLVESGADPNDVYTDD 267
++V+L+Q IA+G + T +D H D VTAL VAAQGGH A V LL+E + V KD++ TPLL A GN EVA+ LV++GADPN + DD
Sbjct: 548 YLVKLSQMIAEG--KMTNEDPHVDGVTALHVAAQGGHLATVDLLLEHSPEMVLVKDDQARTPLLLAIKGNHGEVATALVKAGADPNTPFVDD 637
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A7S3QCF7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCF7_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 5.060e-13 Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 1 FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVKAKDEEGFTPLLNA--GNFEEVASFLVESGADPNDVYTDD 267
++ +L Q I G E +D H D VTA+ VAAQGGH V +L+E ADV D+E TPLL A GN+ +VA LV+ GADPN Y DD
Sbjct: 568 YLEKLVQMIEAGTVED--EDPHVDGVTAVHVAAQGGHLETVTILIEAKADVTILDDEDRTPLLLAVKGNYGDVAMALVKGGADPNTPYVDD 656
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A7S2UKR6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKR6_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.270e-12 Identity = 47/94 (50.00%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 1 FVVQLAQTIADG---GEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVKAKDEEGFTPLLNA--GNFEEVASFLVESGADPNDVYTDD 267
++ +LA+ A+G EEP H D VTA+ VAAQGGH A V++LV GAD D+E + LL A GN+ EVAS LV+ GADPN Y DD
Sbjct: 308 YLEKLAKMQAEGTAVDEEP-----HVDGVTAVHVAAQGGHLAAVEVLVAAGADATVLDQEKRSALLLAVKGNYGEVASALVKGGADPNTPYVDD 396
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A7S1GGD5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GGD5_CYCTE) HSP 1 Score: 70.9 bits (172), Expect = 2.300e-12 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 1 FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVKAKDEEGFTPLLNA--GNFEEVASFLVESGADPNDVYTDD 267
++ +L + I +G + T DD H D VTAL VAAQGGH V +L+E A V+ KD+EG T LL A GN EVA LV++GA+PN Y D+
Sbjct: 142 YLEKLKKMIEEGTVDNT-DDPHVDGVTALHVAAQGGHLDCVNVLLEAKAKVEVKDDEGRTALLLAIKGNHGEVAVELVKAGANPNTPYVDE 231
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Match: A0A482RYB2_9ARCH (Ankyrin repeat domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RYB2_9ARCH) HSP 1 Score: 70.5 bits (171), Expect = 2.540e-12 Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 1 FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADVKAKDEEGFTPLLNA--GNFEEVASFLVESGADPNDVYTDD 267
++ Q+A+ +A+G E+ + H+D VTAL +AAQGGH +V LV+ A V DEE TPLL + V+ +L+E GA+PNDVY DD
Sbjct: 54 YIEQVAKGVAEGKEDV---EPHKDGVTALSLAAQGGHLDLVHALVDAQAAVDVADEEDETPLLASFKNKHYNVSYYLLEHGANPNDVYVDD 141 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13378.2698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13378.2698.1 >prot_Ecto-sp13_S_contig13378.2698.1 ID=prot_Ecto-sp13_S_contig13378.2698.1|Name=mRNA_Ecto-sp13_S_contig13378.2698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp FVVQLAQTIADGGEEPTGDDAHRDDVTALMVAAQGGHEAVVKLLVEKGADback to top mRNA from alignment at Ecto-sp13_S_contig13378:99..847+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13378.2698.1 ID=mRNA_Ecto-sp13_S_contig13378.2698.1|Name=mRNA_Ecto-sp13_S_contig13378.2698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=749bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13378:99..847+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13378:99..847+ >mRNA_Ecto-sp13_S_contig13378.2698.1 ID=mRNA_Ecto-sp13_S_contig13378.2698.1|Name=mRNA_Ecto-sp13_S_contig13378.2698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13378:99..847+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |