mRNA_Ecto-sp13_S_contig13375.2695.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A6A4ZVF9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZVF9_9STRA) HSP 1 Score: 208 bits (529), Expect = 9.020e-61 Identity = 111/232 (47.84%), Postives = 147/232 (63.36%), Query Frame = 3
Query: 60 LWAKYTLQRQSGVAHPQLANGRKGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWPA 755
LW + T S +A+ +KG++GRK + +L ER+ IP DRTT + +A + VPKSTL K L HS+++KP LT K RL+W + G +VHD D+VHVDEKWFY+ + + YL +EPP R +SKR+ TKVMFL+AVARPR N TN FDG+IG W FT+ VPA R+SRNR +GT+VT VT++TY+ L+D VIPAIK KWP+
Sbjct: 40 LWKRATYNPGSNTLCQDVASRKKGRAGRK-LKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFERL----GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPS 266
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA) HSP 1 Score: 202 bits (515), Expect = 2.280e-57 Identity = 109/231 (47.19%), Postives = 144/231 (62.34%), Query Frame = 3
Query: 60 LWAKYTLQRQSGVAHPQLANGRKGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
LW + S +A+ +KG++GRK + +L ER+ IP DRTT + +A + VPKSTL K L HS+++KP LT K RL+W + G +VHD D+VHVDEKWFY+ + + YL +EPP R +SKR+ TKVMFL+AVARPR N TN FDG+IG W FT+ VPA R+SRNR + T+VT VT++TY+ L+D VIPAIK KWP
Sbjct: 55 LWKRAAYNPGSNTLCQDVASRKKGRAGRK-LKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFERL----GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWP 280
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A6A4Y7D4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Y7D4_9STRA) HSP 1 Score: 201 bits (510), Expect = 3.370e-56 Identity = 111/227 (48.90%), Postives = 147/227 (64.76%), Query Frame = 3
Query: 90 SGVAHPQLANGRKGKSGRK-GISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFE-----DFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
+G H +AN +KG GRK + E+++E+L +PL DRT+ R ++ G+ TLHR KA RAHS+AI+PFLT+ K RL + S+V HD D VH+DEKWFY+ K+ +KFYL ++ P RK +SKRY TKVMFL+AVARPR AT +DGKIG W F VPA R+S NR AGT+ TK+V VTK+ Y+A+L+D+V+PAI KWP
Sbjct: 55 NGNMHVSVANRKKGNVGRKKAFTAEQIKEKLLAVPLADRTSFRSISEKTGIKLGTLHRCFKAGMFRAHSSAIRPFLTDANKYARLTFA---------ASKVGHDMTMNAMLDHVHLDEKWFYITKETRKFYLAPGEKGPDRKCKSKRYITKVMFLSAVARPRFVEATGEWWDGKIGTWPFVAAVPANRSSCNRPAGTMETKAVTVTKDVYRARLIDDVLPAIVAKWP 272
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A485LNS7_9STRA (Aste57867_23539 protein n=3 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNS7_9STRA) HSP 1 Score: 191 bits (486), Expect = 6.010e-54 Identity = 103/220 (46.82%), Postives = 143/220 (65.00%), Query Frame = 3
Query: 111 LANGRKGKSGRK-GISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWPAGTRH 767
+ N +KGK GRK + E+++ +L ++PL++RTT R ++ G+P +LHR LK RAHS++I+P LT+ K RL++ V G + +D D VH+DEKWFYL + ++FYL ++ P RK +SKRY TKVMFL AVA PR + T +DGKIG W F VPA+R+S NR AGT+ TK V VTK+ Y+A L+ V+PAI +KWP RH
Sbjct: 69 IGNKKKGKVGRKMSYTKEQIKNKLLEVPLSERTTLRSISEKTGIPLGSLHRYLKQGLFRAHSSSIRPLLTDANKYARLKYAAALV----GPTMQFNDMLDVVHLDEKWFYLTTERRRFYLVPGEKEPERKCKSKRYITKVMFLCAVAPPRFDDETQTWWDGKIGAWPFIDGVPALRSSVNRPAGTVETKCVSVTKDVYRAFLLGYVLPAIIDKWPGPGRH 284
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 194 bits (493), Expect = 6.050e-54 Identity = 114/275 (41.45%), Postives = 155/275 (56.36%), Query Frame = 3
Query: 60 LWAKYTLQRQSGVAHPQLANGRKGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVE-VTKETYKAKLVDEVIPAIKEKWPAGTRHHLHPAEQREAAPR*R--RPGLAGGGRIG-WIRHSTIQP 872
LW + + LA+G G GRK I +ELR ++R IPL+ R T + LAAALGV + + R LK R HS+ +KP LT ++ R+++ L GG V D D VH+DEKWF D + +YL D+E PVR+ QSKR+ +K MF+AAVARPR++ FDGKIG+WAF ++ A R S+NR GT+V ++VE V +E YKA + ++IPAIK KWP + +Q A P P + GR G W QP
Sbjct: 49 LWELHKKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQP 323
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A6A4Z2B2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2B2_9STRA) HSP 1 Score: 195 bits (496), Expect = 6.940e-54 Identity = 104/210 (49.52%), Postives = 135/210 (64.29%), Query Frame = 3
Query: 126 KGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWPA 755
KG GR + E + RL+ +P RTT R +AAAL +P+STLH K +S++++P LT++ KI R++W L +V V D D+VHVDEKWF+ + +YL +EPP R +SK++ TKVMFL+AVARPR + A FDGK+G W FT KVPA R SRNR AGTLVT V VT+ YKA L+D VIPAIK KWP+
Sbjct: 95 KGHCGR-NLKHESVASRLQALPKAKRTTFRSIAAALNMPRSTLHAYYKRGIFVKYSSSVRPALTDSNKIVRVKWALDFVHALNENEYVFSDMMDYVHVDEKWFFATTVKRTYYLAPGEEPPHRTCKSKKFITKVMFLSAVARPRWDSAKGELFDGKLGTWHFTTKVPAARGSRNRPAGTLVTSPVSVTRSVYKAMLLDHVIPAIKRKWPS 303
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 194 bits (494), Expect = 8.920e-54 Identity = 106/231 (45.89%), Postives = 143/231 (61.90%), Query Frame = 3
Query: 60 LWAKYTLQRQSGVAHPQLANGRKGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
+W + +S + + K SGRK +L +R+ IP DRTT +R+A+ + +P ++LHR K L HS+ +KP LT+ K RL+W ++V G V D +VH+DEKWFY+ + + YL +EPP R QSKR+ TKVMFL+AVARPR N + FDGKIG W FT+ VPA RNSRNR +GTLVT V V+++TY+ LV+ VIPAIK KWP
Sbjct: 52 IWKRANFCPESNTLLQDIGSRIKAASGRKK-KYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFV----GPDLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWP 277
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA) HSP 1 Score: 191 bits (486), Expect = 3.520e-53 Identity = 105/216 (48.61%), Postives = 140/216 (64.81%), Query Frame = 3
Query: 111 LANGRKGKSGR--KGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
+A+ KG+SGR K +S+ E RL+ IP RTT R +AAA+ + +STLH K +++ ++P LT+ K R++WV++ + + D + VHVDEKWF+ K +K YL +EPP R +SKRY TKVMFL+AVARPR FDGKIG W FT++VPA R+SRNRAAGTLVTK V VT++ Y+ L+D VIPAIK KWP
Sbjct: 14 VASRIKGQSGRNFKHVSVAE---RLKKIPKTQRTTFRSIAAAMNMSRSTLHAYYKRGIFVKYTSTVRPLLTDANKAVRVQWVMKHLHALSSAQYAFDDMMNTVHVDEKWFFATKISKKMYLAPGEEPPHRTCKSKRYITKVMFLSAVARPRWVDDEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPVSVTQDIYRKMLIDNVIPAIKAKWP 226
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: W4HB86_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HB86_9STRA) HSP 1 Score: 192 bits (488), Expect = 8.070e-53 Identity = 113/287 (39.37%), Postives = 165/287 (57.49%), Query Frame = 3
Query: 57 TLWAKYTLQRQSGVAHPQL----ANGRKGKSGRK-GISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWPAG----------TRHHLHPAEQREAAPR*RRPGLAGGGRIGWIRHSTIQP 872
T+ + +Q G+ + A+ KG+ GRK + E+++ +L +PL RTT R ++ G+ +LHR LK R+HSNAIKP LT+ K R++ + +V G + ++D FVH+DEKWFY+ K +K+YL ++ P R+ +SK+Y TKVMFL AVARPR+N AT++ +DGKIG+W F + V A R+S NR AGTL TKS+ VTK+ Y+ L+D+V+PAI KWP R H+ P + + A L +GW QP
Sbjct: 50 TIRRVLAVAKQQGIGGGNMKVTVASKMKGRVGRKKAFTAEQVKAKLLQVPLAQRTTLRSISERTGISLGSLHRYLKLGLFRSHSNAIKPLLTDANKYGRMKHAVEFV----GSTLELNDMLQFVHLDEKWFYITKVSRKYYLVPGEKEPKRECKSKQYITKVMFLCAVARPRYNHATDSWWDGKIGIWPFVEPVAAQRDSVNRKAGTLETKSITVTKDVYRTFLLDKVLPAIVAKWPRADHTIKLQHDNARAHVTPEDAKLKA------ALDTYKAVGWYMSLAPQP 326
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A024TQW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQW7_9STRA) HSP 1 Score: 190 bits (483), Expect = 8.830e-53 Identity = 107/244 (43.85%), Postives = 154/244 (63.11%), Query Frame = 3
Query: 36 RMAVD*ETLWAKYTLQRQSGVAHPQL----ANGRKGKSGRK-GISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
R AV E ++ GVA + A+ +KG+ GRK + E+++ +L ++PL DRT+ R +A G+ +TLHR L+ RAHS++I+P LT+ K RL++ V G ++ D VH+DEKWFY+ ++ +KFYL ++ P RK ++KR+ TKVMFL+AVARPR+ T+ +DGKIG W FT VPA+R S NR AG+L TKS+ VTK+ Y++ LVD V+PAI KWP
Sbjct: 11 REAVLREVFLKSNARAKKQGVADGNMSASVASKKKGRVGRKKAYTTEQVKTKLLEVPLEDRTSLRSIAEKTGIKLATLHRYLRLGMFRAHSSSIRPMLTDANKYARLKYAANKV----GPDMMMDAMLDCVHLDEKWFYITRETRKFYLVPGEKGPDRKCKNKRFITKVMFLSAVARPRYVDETDQWWDGKIGTWPFTAVVPAMRTSVNRVAGSLETKSINVTKDVYRSFLVDRVLPAIVSKWP 250 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13375.2695.1 >prot_Ecto-sp13_S_contig13375.2695.1 ID=prot_Ecto-sp13_S_contig13375.2695.1|Name=mRNA_Ecto-sp13_S_contig13375.2695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp MFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSback to top mRNA from alignment at Ecto-sp13_S_contig13375:3223..4416- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13375.2695.1 ID=mRNA_Ecto-sp13_S_contig13375.2695.1|Name=mRNA_Ecto-sp13_S_contig13375.2695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1194bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13375:3223..4416- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13375:3223..4416- >mRNA_Ecto-sp13_S_contig13375.2695.1 ID=mRNA_Ecto-sp13_S_contig13375.2695.1|Name=mRNA_Ecto-sp13_S_contig13375.2695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=282bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13375:3223..4416- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |