mRNA_Ecto-sp13_S_contig13375.2695.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13375.2695.1
Unique NamemRNA_Ecto-sp13_S_contig13375.2695.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A6A4ZVF9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZVF9_9STRA)

HSP 1 Score: 208 bits (529), Expect = 9.020e-61
Identity = 111/232 (47.84%), Postives = 147/232 (63.36%), Query Frame = 3
Query:   60 LWAKYTLQRQSGVAHPQLANGRKGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWPA 755
            LW + T    S      +A+ +KG++GRK +   +L ER+  IP  DRTT + +A  + VPKSTL    K   L  HS+++KP LT   K  RL+W    +    G   +VHD  D+VHVDEKWFY+ +  +  YL   +EPP R  +SKR+ TKVMFL+AVARPR N  TN  FDG+IG W FT+ VPA R+SRNR +GT+VT    VT++TY+  L+D VIPAIK KWP+
Sbjct:   40 LWKRATYNPGSNTLCQDVASRKKGRAGRK-LKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFERL----GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPS 266          
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA)

HSP 1 Score: 202 bits (515), Expect = 2.280e-57
Identity = 109/231 (47.19%), Postives = 144/231 (62.34%), Query Frame = 3
Query:   60 LWAKYTLQRQSGVAHPQLANGRKGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
            LW +      S      +A+ +KG++GRK +   +L ER+  IP  DRTT + +A  + VPKSTL    K   L  HS+++KP LT   K  RL+W    +    G   +VHD  D+VHVDEKWFY+ +  +  YL   +EPP R  +SKR+ TKVMFL+AVARPR N  TN  FDG+IG W FT+ VPA R+SRNR + T+VT    VT++TY+  L+D VIPAIK KWP
Sbjct:   55 LWKRAAYNPGSNTLCQDVASRKKGRAGRK-LKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFERL----GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWP 280          
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A6A4Y7D4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Y7D4_9STRA)

HSP 1 Score: 201 bits (510), Expect = 3.370e-56
Identity = 111/227 (48.90%), Postives = 147/227 (64.76%), Query Frame = 3
Query:   90 SGVAHPQLANGRKGKSGRK-GISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFE-----DFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
            +G  H  +AN +KG  GRK   + E+++E+L  +PL DRT+ R ++   G+   TLHR  KA   RAHS+AI+PFLT+  K  RL +           S+V HD       D VH+DEKWFY+ K+ +KFYL   ++ P RK +SKRY TKVMFL+AVARPR   AT   +DGKIG W F   VPA R+S NR AGT+ TK+V VTK+ Y+A+L+D+V+PAI  KWP
Sbjct:   55 NGNMHVSVANRKKGNVGRKKAFTAEQIKEKLLAVPLADRTSFRSISEKTGIKLGTLHRCFKAGMFRAHSSAIRPFLTDANKYARLTFA---------ASKVGHDMTMNAMLDHVHLDEKWFYITKETRKFYLAPGEKGPDRKCKSKRYITKVMFLSAVARPRFVEATGEWWDGKIGTWPFVAAVPANRSSCNRPAGTMETKAVTVTKDVYRARLIDDVLPAIVAKWP 272          
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A485LNS7_9STRA (Aste57867_23539 protein n=3 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNS7_9STRA)

HSP 1 Score: 191 bits (486), Expect = 6.010e-54
Identity = 103/220 (46.82%), Postives = 143/220 (65.00%), Query Frame = 3
Query:  111 LANGRKGKSGRK-GISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWPAGTRH 767
            + N +KGK GRK   + E+++ +L ++PL++RTT R ++   G+P  +LHR LK    RAHS++I+P LT+  K  RL++    V    G +   +D  D VH+DEKWFYL  + ++FYL   ++ P RK +SKRY TKVMFL AVA PR +  T   +DGKIG W F   VPA+R+S NR AGT+ TK V VTK+ Y+A L+  V+PAI +KWP   RH
Sbjct:   69 IGNKKKGKVGRKMSYTKEQIKNKLLEVPLSERTTLRSISEKTGIPLGSLHRYLKQGLFRAHSSSIRPLLTDANKYARLKYAAALV----GPTMQFNDMLDVVHLDEKWFYLTTERRRFYLVPGEKEPERKCKSKRYITKVMFLCAVAPPRFDDETQTWWDGKIGAWPFIDGVPALRSSVNRPAGTVETKCVSVTKDVYRAFLLGYVLPAIIDKWPGPGRH 284          
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR)

HSP 1 Score: 194 bits (493), Expect = 6.050e-54
Identity = 114/275 (41.45%), Postives = 155/275 (56.36%), Query Frame = 3
Query:   60 LWAKYTLQRQSGVAHPQLANGRKGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVE-VTKETYKAKLVDEVIPAIKEKWPAGTRHHLHPAEQREAAPR*R--RPGLAGGGRIG-WIRHSTIQP 872
            LW  +   +        LA+G  G  GRK I  +ELR ++R IPL+ R T + LAAALGV  + + R LK    R HS+ +KP LT   ++ R+++ L       GG  V  D  D VH+DEKWF    D + +YL  D+E PVR+ QSKR+ +K MF+AAVARPR++      FDGKIG+WAF ++  A R S+NR  GT+V ++VE V +E YKA  + ++IPAIK KWP   +      +Q  A P      P +   GR G W      QP
Sbjct:   49 LWELHKKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQP 323          
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A6A4Z2B2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2B2_9STRA)

HSP 1 Score: 195 bits (496), Expect = 6.940e-54
Identity = 104/210 (49.52%), Postives = 135/210 (64.29%), Query Frame = 3
Query:  126 KGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWPA 755
            KG  GR  +  E +  RL+ +P   RTT R +AAAL +P+STLH   K      +S++++P LT++ KI R++W L +V        V  D  D+VHVDEKWF+     + +YL   +EPP R  +SK++ TKVMFL+AVARPR + A    FDGK+G W FT KVPA R SRNR AGTLVT  V VT+  YKA L+D VIPAIK KWP+
Sbjct:   95 KGHCGR-NLKHESVASRLQALPKAKRTTFRSIAAALNMPRSTLHAYYKRGIFVKYSSSVRPALTDSNKIVRVKWALDFVHALNENEYVFSDMMDYVHVDEKWFFATTVKRTYYLAPGEEPPHRTCKSKKFITKVMFLSAVARPRWDSAKGELFDGKLGTWHFTTKVPAARGSRNRPAGTLVTSPVSVTRSVYKAMLLDHVIPAIKRKWPS 303          
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA)

HSP 1 Score: 194 bits (494), Expect = 8.920e-54
Identity = 106/231 (45.89%), Postives = 143/231 (61.90%), Query Frame = 3
Query:   60 LWAKYTLQRQSGVAHPQLANGRKGKSGRKGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
            +W +     +S      + +  K  SGRK     +L +R+  IP  DRTT +R+A+ + +P ++LHR  K   L  HS+ +KP LT+  K  RL+W  ++V    G   V  D   +VH+DEKWFY+ +  +  YL   +EPP R  QSKR+ TKVMFL+AVARPR N   +  FDGKIG W FT+ VPA RNSRNR +GTLVT  V V+++TY+  LV+ VIPAIK KWP
Sbjct:   52 IWKRANFCPESNTLLQDIGSRIKAASGRKK-KYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFV----GPDLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWP 277          
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.520e-53
Identity = 105/216 (48.61%), Postives = 140/216 (64.81%), Query Frame = 3
Query:  111 LANGRKGKSGR--KGISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
            +A+  KG+SGR  K +S+ E   RL+ IP   RTT R +AAA+ + +STLH   K      +++ ++P LT+  K  R++WV++ +   +       D  + VHVDEKWF+  K  +K YL   +EPP R  +SKRY TKVMFL+AVARPR        FDGKIG W FT++VPA R+SRNRAAGTLVTK V VT++ Y+  L+D VIPAIK KWP
Sbjct:   14 VASRIKGQSGRNFKHVSVAE---RLKKIPKTQRTTFRSIAAAMNMSRSTLHAYYKRGIFVKYTSTVRPLLTDANKAVRVQWVMKHLHALSSAQYAFDDMMNTVHVDEKWFFATKISKKMYLAPGEEPPHRTCKSKRYITKVMFLSAVARPRWVDDEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPVSVTQDIYRKMLIDNVIPAIKAKWP 226          
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: W4HB86_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HB86_9STRA)

HSP 1 Score: 192 bits (488), Expect = 8.070e-53
Identity = 113/287 (39.37%), Postives = 165/287 (57.49%), Query Frame = 3
Query:   57 TLWAKYTLQRQSGVAHPQL----ANGRKGKSGRK-GISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWPAG----------TRHHLHPAEQREAAPR*RRPGLAGGGRIGWIRHSTIQP 872
            T+     + +Q G+    +    A+  KG+ GRK   + E+++ +L  +PL  RTT R ++   G+   +LHR LK    R+HSNAIKP LT+  K  R++  + +V    G +  ++D   FVH+DEKWFY+ K  +K+YL   ++ P R+ +SK+Y TKVMFL AVARPR+N AT++ +DGKIG+W F + V A R+S NR AGTL TKS+ VTK+ Y+  L+D+V+PAI  KWP             R H+ P + +  A       L     +GW      QP
Sbjct:   50 TIRRVLAVAKQQGIGGGNMKVTVASKMKGRVGRKKAFTAEQVKAKLLQVPLAQRTTLRSISERTGISLGSLHRYLKLGLFRSHSNAIKPLLTDANKYGRMKHAVEFV----GSTLELNDMLQFVHLDEKWFYITKVSRKYYLVPGEKEPKRECKSKQYITKVMFLCAVARPRYNHATDSWWDGKIGIWPFVEPVAAQRDSVNRKAGTLETKSITVTKDVYRTFLLDKVLPAIVAKWPRADHTIKLQHDNARAHVTPEDAKLKA------ALDTYKAVGWYMSLAPQP 326          
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Match: A0A024TQW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQW7_9STRA)

HSP 1 Score: 190 bits (483), Expect = 8.830e-53
Identity = 107/244 (43.85%), Postives = 154/244 (63.11%), Query Frame = 3
Query:   36 RMAVD*ETLWAKYTLQRQSGVAHPQL----ANGRKGKSGRK-GISIEELRERLRDIPLNDRTTQRRLAAALGVPKSTLHRNLKALGLRAHSNAIKPFLTNNGKIERLRWVLRWVRTAAGGSRVVHDFEDFVHVDEKWFYLFKDGQKFYLYDDDEPPVRKVQSKRYSTKVMFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKSVEVTKETYKAKLVDEVIPAIKEKWP 752
            R AV  E         ++ GVA   +    A+ +KG+ GRK   + E+++ +L ++PL DRT+ R +A   G+  +TLHR L+    RAHS++I+P LT+  K  RL++    V    G   ++    D VH+DEKWFY+ ++ +KFYL   ++ P RK ++KR+ TKVMFL+AVARPR+   T+  +DGKIG W FT  VPA+R S NR AG+L TKS+ VTK+ Y++ LVD V+PAI  KWP
Sbjct:   11 REAVLREVFLKSNARAKKQGVADGNMSASVASKKKGRVGRKKAYTTEQVKTKLLEVPLEDRTSLRSIAEKTGIKLATLHRYLRLGMFRAHSSSIRPMLTDANKYARLKYAANKV----GPDMMMDAMLDCVHLDEKWFYITRETRKFYLVPGEKGPDRKCKNKRFITKVMFLSAVARPRYVDETDQWWDGKIGTWPFTAVVPAMRTSVNRVAGSLETKSINVTKDVYRSFLVDRVLPAIVSKWP 250          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13375.2695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4ZVF9_9STRA9.020e-6147.84Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4FAY9_9STRA2.280e-5747.19Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6A4Y7D4_9STRA3.370e-5648.90Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A485LNS7_9STRA6.010e-5446.82Aste57867_23539 protein n=3 Tax=Aphanomyces stella... [more]
W2NW41_PHYPR6.050e-5441.45HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]
A0A6A4Z2B2_9STRA6.940e-5449.52Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A485KBU5_9STRA8.920e-5445.89Aste57867_2438 protein n=2 Tax=Aphanomyces stellat... [more]
W4GWE0_9STRA3.520e-5348.61Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
W4HB86_9STRA8.070e-5339.37Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A024TQW7_9STRA8.830e-5343.85Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13375contigEcto-sp13_S_contig13375:3223..4416 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score99.4
Seed ortholog evalue9.7e-19
Seed eggNOG ortholog157072.XP_008870373.1
Model size1194
Hectar predicted targeting categoryother localisation
Exons1
EggNOG OGs2CMKC@1,2QQNW@2759
Cds size282
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462714.3806536-UTR-Ecto-sp13_S_contig13375:3222..36071681462714.3806536-UTR-Ecto-sp13_S_contig13375:3222..3607Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13375 3223..3607 -
1681462714.3998284-UTR-Ecto-sp13_S_contig13375:3889..44161681462714.3998284-UTR-Ecto-sp13_S_contig13375:3889..4416Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13375 3890..4416 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462714.390113-CDS-Ecto-sp13_S_contig13375:3607..38891681462714.390113-CDS-Ecto-sp13_S_contig13375:3607..3889Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13375 3608..3889 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13375.2695.1prot_Ecto-sp13_S_contig13375.2695.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13375 3608..3889 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13375.2695.1

>prot_Ecto-sp13_S_contig13375.2695.1 ID=prot_Ecto-sp13_S_contig13375.2695.1|Name=mRNA_Ecto-sp13_S_contig13375.2695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp
MFLAAVARPRHNPATNAPFDGKIGLWAFTKKVPAVRNSRNRAAGTLVTKS
VEVTKETYKAKLVDEVIPAIKEKWPAGTRHHLHPAEQREAAPR*
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mRNA from alignment at Ecto-sp13_S_contig13375:3223..4416-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13375.2695.1 ID=mRNA_Ecto-sp13_S_contig13375.2695.1|Name=mRNA_Ecto-sp13_S_contig13375.2695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1194bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13375:3223..4416- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTGCGTACAAGACCGCCGCGGAAGAGTTCGGCTGCGAATGGCAGTCGAT TAAGAGACACTATGGGCGAAGTACACTCTGCAGCGTCAATCAGGAGTCGC TCATCCGCAGCTAGCAAACGGTCGGAAGGGAAAAAGCGGCAGGAAAGGTA TTTCTATCGAAGAATTGCGGGAGCGCCTCCGCGATATCCCGCTGAACGAC CGCACCACACAGCGCCGGTTGGCTGCGGCACTCGGGGTTCCTAAGTCCAC GCTGCACAGAAACCTCAAGGCGCTTGGATTGAGGGCACACTCGAACGCGA TCAAGCCGTTTCTCACCAACAACGGGAAGATCGAAAGGCTGAGGTGGGTG TTGCGGTGGGTACGGACAGCAGCAGGCGGTTCCCGCGTGGTGCACGACTT CGAAGACTTCGTCCACGTGGATGAGAAGTGGTTCTATCTTTTCAAGGATG GGCAGAAGTTCTACCTGTACGACGATGATGAACCCCCAGTCCGCAAGGTC CAGAGCAAGAGATACAGCACGAAGGTCATGTTTCTCGCTGCTGTAGCTCG CCCGCGCCACAACCCGGCTACCAACGCCCCATTCGACGGCAAGATCGGCT TATGGGCGTTCACGAAGAAGGTTCCTGCTGTACGCAACAGCCGGAACCGG GCTGCTGGTACTCTTGTAACAAAGAGTGTGGAGGTTACGAAGGAGACCTA CAAGGCGAAGCTAGTCGACGAAGTGATCCCCGCAATCAAGGAGAAGTGGC CTGCGGGGACTCGGCACCATCTTCATCCAGCAGAACAACGCGAAGCCGCA CCGCGTTAACGAAGACCAGGGCTTGCTGGAGGCGGCCGTATCGGATGGAT TCGACATTCGACTATTCAACCAGCCGCCGAACAGCCCTGACACCAACCTC CTCGACCTGGGTTTCTTCGCGTCGATCCAGTCCCTGCAGGATCGCACCCG GGCCAGAACCATGGATGATCTCATCCGCGAGGTGGAGGCCGCATGGGCGG CGGCGACGCCGGCCAATCTAGGCAAGGTGTGGAGTTCGCTCCAGGCTTGC ATGGAGCAAATCCTGCTCTGTGGCGGGGAGAACACCTACAAGCTGCCTCA CTTGGGCAAGGACAAGGCCGCGCGGGCAGGGACACCAATCCCCCGGCGGT ACCCGATTTCGGAGGAGTCGTGGACCAAGGGCAACGCGGCGCTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13375:3223..4416-

>mRNA_Ecto-sp13_S_contig13375.2695.1 ID=mRNA_Ecto-sp13_S_contig13375.2695.1|Name=mRNA_Ecto-sp13_S_contig13375.2695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=282bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13375:3223..4416- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTTCTCGCTGCTGTAGCTCGCCCGCGCCACAACCCGGCTACCAACGC
CCCATTCGACGGCAAGATCGGCTTATGGGCGTTCACGAAGAAGGTTCCTG
CTGTACGCAACAGCCGGAACCGGGCTGCTGGTACTCTTGTAACAAAGAGT
GTGGAGGTTACGAAGGAGACCTACAAGGCGAAGCTAGTCGACGAAGTGAT
CCCCGCAATCAAGGAGAAGTGGCCTGCGGGGACTCGGCACCATCTTCATC
CAGCAGAACAACGCGAAGCCGCACCGCGTTAA
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