mRNA_Ecto-sp13_S_contig13370.2691.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 159 bits (401), Expect = 3.370e-41 Identity = 89/177 (50.28%), Postives = 114/177 (64.41%), Query Frame = 2
Query: 200 FSEWAREDDDFEQRFKDFPVAFDHPYHGGPVFNMSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAKNLSGSAVRACNSANAKLVANGQAPNAEIACYAELAH*MNDYVDIMN 730
F EWA E+RF DFP+AF+HP+HG PVFNMS PPH +VN+L S LP + R L L+ + T E++ V F LKTLE V+ NEE GGG+ + E + L+RF PE + NS+N M+V L+AK +S +AV C A KL + PN EIACYAELA MND++DIMN
Sbjct: 302 FGEWADPKSRLEERFADFPMAFNHPHHGEPVFNMSGPPHLLX-VVNALWYSSLPSKQRHLKNLFWNRDTEEFEWVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAKCVSRTAVYVCGCAQEKLAS----PNGEIACYAELAEVMNDFLDIMN 473
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE) HSP 1 Score: 157 bits (398), Expect = 2.050e-40 Identity = 87/177 (49.15%), Postives = 115/177 (64.97%), Query Frame = 2
Query: 200 FSEWAREDDDFEQRFKDFPVAFDHPYHGGPVFNMSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAKNLSGSAVRACNSANAKLVANGQAPNAEIACYAELAH*MNDYVDIMN 730
FSEWA+ D FEQR KD+PVAF HP+H GPVFNMSDP H KK+VN+L S L + R L LW +P+T +L F LKTLEK + EE T E+ ATL+RF M + +S+ M+V L+AK +S +A+ SA KL+A + P+ E+ACYA++A MND++DIMN
Sbjct: 517 FSEWAKSDSVFEQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLTDAPELASFSLKTLEKAWREEEGHRANRTAAERAATLRRFLKMDAACLDRDSHTCMSVKLSAKCVSKTAMHVIASAQGKLLALDKPPSGELACYADVAEVMNDFLDIMN 693
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: D8LK65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI) HSP 1 Score: 144 bits (363), Expect = 1.850e-38 Identity = 74/131 (56.49%), Postives = 88/131 (67.18%), Query Frame = 2
Query: 200 FSEWAREDDDFEQRFKDFPVAFDHPYHGGPVFNMSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAK 592
FSEWAR D FE+R DF VAF HP HGGPVFNMSDP H KK+VN+L SD+P + R L +LW + +Y+ V F LKTLEKV+ EE GGG + EQ A L RF PE F NS+N M+VGL+AK
Sbjct: 131 FSEWARGDSAFEKRMGDFKVAFKHPSHGGPVFNMSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEAAEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 144 bits (364), Expect = 4.930e-36 Identity = 74/126 (58.73%), Postives = 93/126 (73.81%), Query Frame = 2
Query: 353 DLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAKNLSGSAVRACNSANAKLVANGQAPNAEIACYAELAH*MNDYVDIMN 730
DLPW+SR LA++ VDP TG Y+LV F LKTLEKV+Y EE GGG + E+ A L R+ + EQFN + +N M+V LA K+LS +AVR CN ANAKLV +GQ P+ IACYAE+A +ND+VDIMN
Sbjct: 363 DLPWKSRNLAKVCVDPETGGYELVEFSLKTLEKVWYTEEKGGGKWLLEEKTAQLTRYSKVVSEQFNRSGFNCMSVRLAVKSLSATAVRMCNDANAKLVRSGQKPDLSIACYAEMARQVNDFVDIMN 488
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: A0A6H5KYD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD6_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.520e-29 Identity = 64/118 (54.24%), Postives = 76/118 (64.41%), Query Frame = 2
Query: 239 RFKDFPVAFDHPYHGGPVFNMSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAK 592
R KDF VAF HP HG PVFNMS+P H KK+VN+L S L + R L LW DP T E + V F LKTLE+V+ EE GGG + EQ A L RF + PE F NS+N M+V L+AK
Sbjct: 2 RHKDFKVAFRHPQHGRPVFNMSEPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEEEEWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFYRNSHNCMSVKLSAK 119
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 124 bits (311), Expect = 8.670e-29 Identity = 72/160 (45.00%), Postives = 93/160 (58.13%), Query Frame = 2
Query: 251 FPVAFDHPYHGGPVFNMSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAKNLSGSAVRACNSANAKLVANGQAPNAEIACYAELAH*MNDYVDIMN 730
FPVAF HP H GP+FNMSDPPH KKI N+ SD + R+LA +W G DLV F L T E+VY E G +Q E+VA++ F + P FN NS+N MNV +AK LSG+ V L+ G+ + E+ CYA LA M+ ++DI N
Sbjct: 368 FPVAFPHPVHLGPIFNMSDPPHILKKIANTCWHSDQDSKKRELA-MWCGDEEGNTDLVRFSLATAERVYNQVENDGNTLSQEEKVASITTFRKVVPSCFNRNSWNCMNVSYSAKVLSGTIVCMIEKVQRDLLTMGKPLDLELDCYAALAAKMDAFIDIFN 526
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 112 bits (280), Expect = 1.260e-24 Identity = 71/177 (40.11%), Postives = 93/177 (52.54%), Query Frame = 2
Query: 200 FSEWAREDDDFEQRFKDFPVAFDHPYHGGPVFNMSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAKNLSGSAVRACNSANAKLVANGQAPNAEIACYAELAH*MNDYVDIMN 730
F W + E F F V F HP H VFNMSDP H KKIVN+L SD+P + R+L +W E F LKT ++VY + E + T E+ ATL F M FN ++ MNV L+AK +SG+ VRA A G++P+ + CY LA +ND+VDI N
Sbjct: 669 FCHWIKGPK--EGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLG-MWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFN 842
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 111 bits (278), Expect = 2.290e-24 Identity = 71/177 (40.11%), Postives = 93/177 (52.54%), Query Frame = 2
Query: 200 FSEWAREDDDFEQRFKDFPVAFDHPYHGGPVFNMSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAKNLSGSAVRACNSANAKLVANGQAPNAEIACYAELAH*MNDYVDIMN 730
F W + E F F V F HP H VFNMSDP H KKIVN+L SD+P + R+L +W E F LKT ++VY + E + T E+ ATL F M FN ++ MNV L+AK +SG+ VRA A G++P+ + CY LA +ND+VDI N
Sbjct: 760 FCHWIKGPK--EGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLG-MWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFN 933
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 105 bits (261), Expect = 3.900e-22 Identity = 69/177 (38.98%), Postives = 90/177 (50.85%), Query Frame = 2
Query: 200 FSEWAREDDDFEQRFKDFPVAFDHPYHGGPVFNMSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAKNLSGSAVRACNSANAKLVANGQAPNAEIACYAELAH*MNDYVDIMN 730
F W + E F F V HP H VFNMSDP H KKIVN+L SD+P + R+L +W E F LKT ++VY + E + T E+ ATL F M FN ++ MNV L+AK +SG+ VRA A G+ P+ + CY H +ND+VDI N
Sbjct: 567 FCRWIKGPQ--EGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLG-MWCVTDQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANRETRGEPPDLALGCYE--GH-LNDFVDIFN 737 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13370.2691.1 >prot_Ecto-sp13_S_contig13370.2691.1 ID=prot_Ecto-sp13_S_contig13370.2691.1|Name=mRNA_Ecto-sp13_S_contig13370.2691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp MSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEback to top mRNA from alignment at Ecto-sp13_S_contig13370:461..1517- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13370.2691.1 ID=mRNA_Ecto-sp13_S_contig13370.2691.1|Name=mRNA_Ecto-sp13_S_contig13370.2691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1057bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13370:461..1517- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13370:461..1517- >mRNA_Ecto-sp13_S_contig13370.2691.1 ID=mRNA_Ecto-sp13_S_contig13370.2691.1|Name=mRNA_Ecto-sp13_S_contig13370.2691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=405bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13370:461..1517- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |