mRNA_Ecto-sp13_S_contig13358.2683.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: D7G2J2_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J2_ECTSI) HSP 1 Score: 117 bits (294), Expect = 3.910e-29 Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL*YCVYVRLCREAG 206
YGPTF DESF+LKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKV+ VR + G
Sbjct: 181 YGPTFVDESFQLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCG 248
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: A0A109UY11_9SACH (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Eremothecium sinecaudum TaxID=45286 RepID=A0A109UY11_9SACH) HSP 1 Score: 96.7 bits (239), Expect = 3.080e-22 Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL 167
YGPTFADESFELKHD+PG LSMAN G+D+N SQFFIT P PWLD +HVVFG+V+
Sbjct: 102 YGPTFADESFELKHDKPGRLSMANRGKDTNGSQFFITTVPTPWLDGRHVVFGEVI 156
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: A0A1J1H4A2_PLARL (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Plasmodium relictum TaxID=85471 RepID=A0A1J1H4A2_PLARL) HSP 1 Score: 94.0 bits (232), Expect = 1.790e-21 Identity = 41/55 (74.55%), Postives = 49/55 (89.09%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL 167
YG +FADE+F+LKHDQPGLLSMAN+G ++N+SQFFIT P PWLD KHVVFGKV+
Sbjct: 86 YGRSFADENFQLKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVV 140
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: A0A1G4JE59_9SACH (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Lachancea sp. CBS 6924 TaxID=433476 RepID=A0A1G4JE59_9SACH) HSP 1 Score: 92.8 bits (229), Expect = 1.140e-20 Identity = 42/55 (76.36%), Postives = 46/55 (83.64%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL 167
YG TF DESFELKHD+PG LSMAN GR++N SQFFIT P PWLD KHVVFG+VL
Sbjct: 103 YGSTFEDESFELKHDRPGRLSMANRGRNTNGSQFFITTVPTPWLDGKHVVFGEVL 157
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 n=9 Tax=Synechocystis TaxID=1142 RepID=PPI2_SYNY3) HSP 1 Score: 91.7 bits (226), Expect = 1.420e-20 Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL 167
YG FADE+F+LKHD+PGLLSMAN+G ++N SQFF+TF P PWLD KHVVFG+V+
Sbjct: 85 YGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVV 139
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: A0A2A9NRP4_9AGAR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NRP4_9AGAR) HSP 1 Score: 92.4 bits (228), Expect = 1.870e-20 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL 167
YG FADE+FEL HDQPGLLSMANSG+D+N SQFF+T P WL+ KHVVFGKVL
Sbjct: 112 YGGIFADENFELNHDQPGLLSMANSGKDTNGSQFFVTTAPASWLNRKHVVFGKVL 166
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: A0A1A8VVK1_PLAMA (Peptidyl-prolyl cis-trans isomerase n=32 Tax=Plasmodium TaxID=5820 RepID=A0A1A8VVK1_PLAMA) HSP 1 Score: 91.3 bits (225), Expect = 1.950e-20 Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL 167
YG +F DE+F++KHDQPGLLSMAN+G ++N+SQFFIT P PWLD KHVVFGKV+
Sbjct: 85 YGRSFTDENFKMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVV 139
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: A5KDH9_PLAVS (Peptidyl-prolyl cis-trans isomerase n=6 Tax=Plasmodium vivax TaxID=5855 RepID=A5KDH9_PLAVS) HSP 1 Score: 92.4 bits (228), Expect = 2.040e-20 Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL*YCVYVRLCREAGGRA 215
YG +F DE+F++KHDQPGLLSMAN+G ++N+SQFFIT P PWLD KHVVFGKV+ VR + G +
Sbjct: 85 YGRSFTDENFKMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVRYMEKEGANS 155
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: D6AXE0_9ACTN (Peptidyl-prolyl cis-trans isomerase n=36 Tax=Streptomyces TaxID=1883 RepID=D6AXE0_9ACTN) HSP 1 Score: 90.9 bits (224), Expect = 2.820e-20 Identity = 48/83 (57.83%), Postives = 55/83 (66.27%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL*YCVYVRLCREAGGRACEYS-TPTCSPC 248
YG FADE+F+LKHD PG+LSMAN+G SN SQFFI P PWLD KHVVFGKVL V+ G R+ + S T T S C
Sbjct: 86 YGEKFADENFQLKHDTPGILSMANAGPHSNGSQFFICTEPTPWLDGKHVVFGKVLDGMDTVKAIESHGSRSGKTSATLTISDC 168
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Match: A0A453BL61_AEGTS (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453BL61_AEGTS) HSP 1 Score: 89.0 bits (219), Expect = 3.080e-20 Identity = 45/79 (56.96%), Postives = 53/79 (67.09%), Query Frame = 3
Query: 3 YGPTFADESFELKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVL*YCVYVRLCREAGGRACEYSTPTC 239
YG F DE+F+LKHDQPG+LSMANSG ++N SQFFITF +P LD KHVVFGKVL ++ G E PTC
Sbjct: 8 YGGKFPDENFKLKHDQPGILSMANSGENTNGSQFFITFKAVPHLDGKHVVFGKVLNGKALLKKLEALGS---ESGKPTC 83 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13358.2683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13358.2683.1 >prot_Ecto-sp13_S_contig13358.2683.1 ID=prot_Ecto-sp13_S_contig13358.2683.1|Name=mRNA_Ecto-sp13_S_contig13358.2683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp STGQRSRTKALNLSTTSLVCSPWLIQVETATTLNSSSPSAHFLGWTQSTSback to top mRNA from alignment at Ecto-sp13_S_contig13358:306..1119+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13358.2683.1 ID=mRNA_Ecto-sp13_S_contig13358.2683.1|Name=mRNA_Ecto-sp13_S_contig13358.2683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=814bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13358:306..1119+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13358:306..1119+ >mRNA_Ecto-sp13_S_contig13358.2683.1 ID=mRNA_Ecto-sp13_S_contig13358.2683.1|Name=mRNA_Ecto-sp13_S_contig13358.2683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=324bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13358:306..1119+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |