mRNA_Ecto-sp13_S_contig13346.2675.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI) HSP 1 Score: 513 bits (1322), Expect = 4.830e-163 Identity = 310/340 (91.18%), Postives = 313/340 (92.06%), Query Frame = 1
Query: 43 HPARDVGGAAAGGGAVHAPLASGTASSGKXXXXXXXXXAETFDAGWLYSRCMQFHAQQGSRGLPPVDLASSVLEVLSRSTDPGELQGSLFDLLGEAGLELMMELIDKAPALGRIDARDLFAIADAHGGXXXXXXXXXX---SAGIGGFDXXXXXXGMAEMGLGGDAATGRSGPTISRQIKIWSTAEKEAEKLRRKDLKKAAKRGGGVAGGQGQQXXXXXXXXXXXGLDWLQSVGFEEEYLKQERLLGLQAGGTGGGESEEAMMLAGLAPEGTREWHDRRSGMPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQSK 1053
HP RDVGG AA GGAVHAPL SGT SS XXXXXXXXXAE FDAGWLYSRCMQFHAQQGSRGLPPVDLASSVLE LSRSTDPGELQG LFD+LGE+GLELMMELIDKAPALGRIDARDLFAIADAHGGXXXXXXXXXX SAGIGGF XXXXXX ATGRSGPTISRQIKIWST+EKEAEKLRRKDLKKAAKRGG VAGGQGQQ XXXXXXXXXXGLDWLQSVGFEEEYLKQERLLGLQAGGTGGGESEEAMMLAGLAPEGTREWHDRRSGMPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQSK
Sbjct: 276 HPVRDVGGGAAEGGAVHAPLTSGTGSSXXXXXXXXXXXAEAFDAGWLYSRCMQFHAQQGSRGLPPVDLASSVLETLSRSTDPGELQGPLFDILGESGLELMMELIDKAPALGRIDARDLFAIADAHGGXXXXXXXXXXXXXSAGIGGFXXXXXXXXXXXXXXXXXDATGRSGPTISRQIKIWSTSEKEAEKLRRKDLKKAAKRGGVVAGGQGQQDXXXXXXXXXXGLDWLQSVGFEEEYLKQERLLGLQAGGTGGGESEEAMMLAGLAPEGTREWHDRRSGMPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQSK 615
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: A0A7S3M5Q6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5Q6_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.560e-14 Identity = 97/300 (32.33%), Postives = 137/300 (45.67%), Query Frame = 1
Query: 178 WLYSRCMQFHAQQGSRGLPPVDLASSVLEVLSRST-DPGELQGSLFDLLGEAGLELMMELI---DKAPALGRIDARDLFAIADAHGGXXXXXXXXXXSAGIGGFDXXXXXXGMAEMGLGGDAATGRSGPTISRQIKIWSTAEKE---AEKLRRKDLKKAAKRGGGVAGGQGQQXXXXXXXXXXXGLDWLQSVGFEEEYLKQERLLGLQAGGTGGGESEEAMMLAGLAPEGTREWHDRRSGMPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPI-TDLEPWAQMAFKGTKRLNPMQSK 1053
WL C A LA +++V ++ D G LQ SLFDL+GEAG ELM+EL+ ++ LG + ++A+ XXXXXXXXXX ++ A +E A + R+++LK A ++ + Q DWLQ +GF +EYL ER LGLQ + + LA EG+ E H++R G+PAG + V G YE+V+IP + + L+ I T LEPWAQ AF GTK LN +QS+
Sbjct: 245 WLLQLCTAHVASSPDSVFDGPQLADEIIKVADQAAGDEGLLQMSLFDLIGEAGFELMLELVQHRERLHGLGSVKTTTTTSVAEPVXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXDDWEAMDYLEGMEYAQNAPEEHLSANQRRKRELKAAREQERLI------QEYGHPQAQNNNNTDWLQQLGFGDEYLMAERALGLQKDRAPHAIPDN--WVNNLAAEGSTEIHEKR-GLPAGTERFVHHG-YEEVNIPAAVRPDSVKEQPLIDIATSLEPWAQKAFLGTKTLNTIQSR 523
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: A0A7R9U1M1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1M1_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 4.900e-14 Identity = 89/303 (29.37%), Postives = 133/303 (43.89%), Query Frame = 1
Query: 172 AGWLYSRCMQFHAQQGSRGLPPVDLASSVLEVLSRSTDPGELQGSLFDLLGEAGLELMMELIDKAPALGRIDARDLFAIADAHGGXXXXXXXXXXSAGIGGFDXXXXXXGMAEMGLG-GDAATGRSGPTISRQIKIWSTAEKEAEKLRR--KDLKKAAKRGGGVAGGQGQQXXXXXXXXXXXGLDWLQSVGFEEEYLKQER----LLGLQAGGTGGGESEEAMM---LAGLAPEGTREWHDRRSGMPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQS 1050
A WL +C + H G L P LA +V+E ++S D LQ LFDLLG+A +L+ME++ +A LG + DL + G + GG G+ M AATGR + + + E E+++ +DL+K +R + + D QS+ E+ E +L L+A E+E A M LAG+ RE+H SG +G + G YE+V +P P+ L+PI +L WAQ+ F+G + LNPMQS
Sbjct: 173 AAWLLDKC-RGHVDAGRSVLDPRQLAEAVVEC-AKSGDEATLQAGLFDLLGDADFDLLMEMVARATELGSLSPADLDHVGMQGG---------RKAGAAGGASREIEGGGLVTMSESIPTAATGRESQRSKGRKRNAARDEDESDRKLETMEDLQKLEQR----KEQEFAEHVVKTAVDVGIDADVAQSMTTEDLTAVLEAQGVDVLTLEAA-----EAESAAMNDPLAGVP----REYHAATSGYTSGTVRRYFPG-YEEVIMPAPQTRPRPTNGRLIPIAELPRWAQLPFRGMETLNPMQS 450
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: A0A2R6WZK4_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WZK4_MARPO) HSP 1 Score: 70.1 bits (170), Expect = 2.420e-9 Identity = 76/296 (25.68%), Postives = 119/296 (40.20%), Query Frame = 1
Query: 169 DAGWLYSRCMQFHAQQGSRGLPPVDLASSVLEVLSRSTDPGELQGSLFDLLGEAGLELMMELIDKAPALGRIDARDLFAIADAHGGXXXXXXXXXXSAGIGGFDXXXXXXGMAEMGLGGDAATGRSGPTISRQIKIWSTAEKEAEKLRRKDLKKAAKRGGGVAGGQGQQXXXXXXXXXXXGLDWLQSVG-FEEEYLKQERLLGLQAGGTGGGESEEAMMLAGLAPEGTREWHDRRSGMPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQSK 1053
D W C + +LA +V VL E+ G LFDL+G+A + + EL+ L + + L A+ A M P+ Q+ + + ++++ +KLRRK+ K+ A+RG AGG+G L+WL VG F ER +G G G E+ ++G A +P G+ + G YE+V +P K E LVPI++L+ +AQ+AF+G K LN +QS+
Sbjct: 38 DLRWYKRMCYKAAEAGAGAQFSGDELALAVARVLESDRSGDEIAGDLFDLIGDAWFDFIQELLQHRKELVDLIQKGLTALRSEKAPAV-----------------------QARM------------PSYGTQVSVQTGSDRQIDKLRRKEEKRQARRGF-AAGGEGDSD-----------LEWLAGVGGFAALIDSGERNVGAINSLIGKG--EDVYGISGTA-------------LPTGSVRKSFKG-YEEVKVPATPGATIKPDERLVPISELDDFAQLAFEGIKTLNRIQSR 270
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: A0A0L0DG16_THETB (Activating signal cointegrator 1 complex subunit 3 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DG16_THETB) HSP 1 Score: 70.1 bits (170), Expect = 2.460e-9 Identity = 85/309 (27.51%), Postives = 116/309 (37.54%), Query Frame = 1
Query: 169 DAGWLYSRCMQFHAQQGSRGLPPVDLASSVLEVLSRSTDPGELQGSLFDLLGEAGLELMMELIDKAPAL---------------GRIDARDLFAIADAHGGXXXXXXXXXXSAGIGGFDXXXXXXGMAEMGLGGDAATGRSGPTISRQIKIWSTAEKEAEKLRRKDLKKAAKRGGGVAGGQGQQXXXXXXXXXXXGLDWLQSVGFEEEYLKQERLLGLQAGGTGGGESEEAMMLAGLAPEGTREWHDRRSGMPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQS 1050
DA WL +C + A G +LA +V EVL+++ D LQ LF+LLG GL+L+ ELI L R+DA D ADA AG+ G G + AA AE A L G +GG + S + E ++ R L A S L G AP GMP+ AT+ +Y +VH+P + + GE L+PI++ EPWA++AFKG K LN +QS
Sbjct: 338 DAAWLREQCARV-AAANDVGTSGDELAMAVHEVLAKNNDATALQSHLFELLGMNGLDLIPELIGSRDELVANWLSMEESDAALAARLDAMDAAVAADA---------AVFDLAGLTGGSNNPHGAGFT---ITSAAAKAXXXXXXXXXXXXTRQAESNANSL-------------GGSGG-------------------VSSKAYTAEAIEARRQAKLAAARARPAISGSGS-LVGAAPV--------NRGMPSNATEEKTK-EYRRVHVPAARASPPGAGERLIPISEFEPWARLAFKGYKSLNRIQS 591
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: A0A1Y1IBL7_KLENI (DEAD/DEAH box helicase domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBL7_KLENI) HSP 1 Score: 68.9 bits (167), Expect = 5.820e-9 Identity = 72/292 (24.66%), Postives = 113/292 (38.70%), Query Frame = 1
Query: 178 WLYSRCMQFHAQQGSRGLPPVDLASSVLEVLSRSTDPGELQGSLFDLLGEAGLELMMELIDKAPALGRIDARDLFAIADAHGGXXXXXXXXXXSAGIGGFDXXXXXXGMAEMGLGGDAATGRSGPTISRQIKIWSTAEKEAEKLRRKDLKKAAKRGGGVAGGQGQQXXXXXXXXXXXGLDWLQSVGFEEEYLKQERLLGLQAGGTGGGESEEAMMLAGLAPEGTREWHDRRSGMPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQSK 1053
WL +C A G+ +LA +VL +L E+ G L DLLG G+E++ EL+ + A+ + L A+ D M P+ Q+ + + +++ +KLRRK+ K+ A+ G A G+G+ DWL G L +GL A G L G +G +P G + G YE+VH+P E LV I +++ +AQ+AF+G LN +QS+
Sbjct: 276 WLQQQCQAASALGGAGAFRGDELALNVLRLLDSEGSGDEVAGDLLDLLGNGGVEIIEELLQRRKAITDAAKKALSALKSV--------------------DDEGKAQQQPRM------------PSYGTQVSVHTDSDRVLDKLRRKEEKRQAR--AGHASGKGESDW-----------DWLAGAGGFVALLD----VGLGARGV-------IDSLVGRGEDGFGSLGVNARALPKGTMRKTFKG-YEEVHVPATPTAEMLPQERLVKIEEMDEFAQLAFEGYTTLNRIQSR 510
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: A0A177V2J1_9BASI (Uncharacterized protein n=4 Tax=Tilletia TaxID=13289 RepID=A0A177V2J1_9BASI) HSP 1 Score: 60.8 bits (146), Expect = 2.330e-6 Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 877 MPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQSK 1053
+P G+ K G YE++HIP P + E LVPITDL PWAQ AF GT RLNP+QSK
Sbjct: 464 LPEGSFKRTKKG-YEEIHIPAPVKAQIPQSE-LVPITDLPPWAQPAFGGTARLNPIQSK 520
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: UPI001EE5E0DB (LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5E0DB) HSP 1 Score: 58.5 bits (140), Expect = 1.230e-5 Identity = 73/313 (23.32%), Postives = 117/313 (37.38%), Query Frame = 1
Query: 169 DAGWLYSRCMQFHAQQGSR--GLPPVDLASSVLEVLSRSTDPGELQGSLFDLLGEAGLELMMELIDKAPALGRIDARDLFAIADAHGGXXXXXXXXXXSAGIGGFDXXXXXXGMAEMGLGGDAATGRSGPTISRQIKIWSTAEKEAEKLRRKDLKKAAKRGGGVAGGQGQQXXXXXXXXXXXGLDWLQSVGFEEEYLKQERLLGLQAGGTGGGESEEAMMLAGLAPEGTREWHD---------RRSGMPAGATKTVVAG--------QYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQS 1050
D+ WL ++ + G GL DL++++ EVL + ELQ LF+LLG E++ L+ L + D A +A++ R PT Q+ I S EK+ KL R++ KK +KR G +G++ F ++ +R LQ + + G + RE + R+S G K V+ YE+V +PP + G+ LVP+ +L+ Q+AF+G K LN +QS
Sbjct: 225 DSSWLLEEVRKYFSSSGETDIGLSLEDLSTTIFEVLCSTKTDEELQNELFELLGFDRFEMIQSLLSNRSRLMKTLVADTNRAA------------------------------IAQVQAQRKKEVER--PTYGCQVTIQSEEEKQLMKLIRREEKKLSKRDGKKVEEEGKKA-------------------FNPMEMRAQREAALQV-------ASNRPLFTGSSKSYQRERYPFVFDSNEEARQSSAYVGGNKMVLPQGFNRNDNKDYEEVSVPPNESAPIDVGQRLVPVNELDEIGQLAFRGMKNLNRIQS 479
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: K3WN69_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WN69_GLOUD) HSP 1 Score: 58.2 bits (139), Expect = 1.700e-5 Identity = 79/323 (24.46%), Postives = 122/323 (37.77%), Query Frame = 1
Query: 109 GTASSGKXXXXXXXXXAETFDAGWLYSRCMQFHAQQGSRGLPPVDLASSVLE-VLSRSTDPGELQGSLFDLLGEAGLELMMELIDKAPALGRIDARDLFAIADAHGGXXXXXXXXXXSAGIGGFDXXXXXXGMAEMGLGGDAATGRSG-PTISRQIKIWSTAEKEAEKLRRKDLKKAAKRGGGVAGGQGQQXXXXXXXXXXXGLDWLQSVGFEEEYLKQERLLG---LQAGGTGGGESEEAMMLAGLAPEGTREWHDRRSGM---PAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQSK 1053
G ++SGK AE L C + + ++LA +L+ V +DP +Q LF L+G G++L+ I L + R + E+ AA G S P ++ I + +E+ K +RK +KA +GGG + +WL++ G++ E L+ +R ++ T + E + G G +GM PA +T G YE V IP E LVPI+DLE +AQ AF+G LN +QSK
Sbjct: 124 GASASGKSKANITMETAEK-----LLQECAKHTSSSAGGFFTTMELAEMILQTVQDNPSDPDMVQTQLFGLVGVEGMDLIAFAIQNQVELAKNVKRQTLQDVEK----------------------------QQELAEKFAAAGGTSTRPAVASSFSIQTASEQLFLKQQRKANRKARAQGGGARDDSDDEQ------------NWLEAAGYDPEVLRLQREFAQEEMRNQSTSLLQREFGQLQGGYDTSGAAG-QLTSAGMLTLPASTKRTYFKG-YEHVFIPAHAKKSLDQNEKLVPISDLEDFAQTAFRGMTHLNRLQSK 399
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Match: A0A7S4JN37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JN37_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.230e-5 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 808 EEAMMLAGLAPEGTREWHDRRSGMPAGATKTVVAGQYEQVHIPPPKLNRNKDGEGLVPITDLEPWAQMAFKGTKRLNPMQS 1050
E M+AGLAP GT+E+H++R G+P G + G YE V IP L+ ++ + + P A+ AF+GT LNPMQS
Sbjct: 130 EMQQMMAGLAPSGTKEYHEKR-GLPPGTEREYGDG-YEMVTIPAKVLDESQLPSRIKLKDAMGPSARKAFRGTDSLNPMQS 208 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13346.2675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13346.2675.1 >prot_Ecto-sp13_S_contig13346.2675.1 ID=prot_Ecto-sp13_S_contig13346.2675.1|Name=mRNA_Ecto-sp13_S_contig13346.2675.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=352bp RASSSSLGGEEESKHPARDVGGAAAGGGAVHAPLASGTASSGKSGAAGAAback to top mRNA from alignment at Ecto-sp13_S_contig13346:3..3298+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13346.2675.1 ID=mRNA_Ecto-sp13_S_contig13346.2675.1|Name=mRNA_Ecto-sp13_S_contig13346.2675.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3296bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13346:3..3298+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13346:3..3298+ >mRNA_Ecto-sp13_S_contig13346.2675.1 ID=mRNA_Ecto-sp13_S_contig13346.2675.1|Name=mRNA_Ecto-sp13_S_contig13346.2675.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1056bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13346:3..3298+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |