prot_Ecto-sp13_S_contig13303.2650.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13303.2650.1
Unique Nameprot_Ecto-sp13_S_contig13303.2650.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length123
Homology
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: D7G6W3_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W3_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 6.370e-48
Identity = 83/98 (84.69%), Postives = 89/98 (90.82%), Query Frame = 0
Query:    2 AAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKAGAIFR 99
            AAAQAT LEYGNTTS  AVVESCSALT+ARLVHLM GPYRL+SHLRVLKKFLLHGQGDLMLTLIEVLGPELDK+ATV YRHNV+GI+EG IK  AI +
Sbjct:   11 AAAQATTLEYGNTTSPTAVVESCSALTDARLVHLMLGPYRLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVEGAIKTSAILQ 108          
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 4.950e-45
Identity = 86/99 (86.87%), Postives = 92/99 (92.93%), Query Frame = 0
Query:    1 QAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKAGAIFR 99
            +AAAQAT LEYGNT SLRAVVESCSALTNARLVHLM GPYRL+SHLRVLKKFLLHGQGDLMLTLIEVLGPELDK+ATV YRHNV+GI+EGVIK  AI +
Sbjct:  513 KAAAQATTLEYGNTISLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVIYRHNVMGIVEGVIKTSAILQ 611          
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.380e-43
Identity = 84/98 (85.71%), Postives = 90/98 (91.84%), Query Frame = 0
Query:    2 AAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKAGAIFR 99
            AAAQAT LEYGNTTSLRAVVESCSALT +RLVHLM GPYRL+SHLRVLKKFLLHGQGDLMLTLIEVLGPELDK+ATV  RHNV+GI+EGVIK  AI +
Sbjct: 1345 AAAQATTLEYGNTTSLRAVVESCSALTKSRLVHLMLGPYRLKSHLRVLKKFLLHGQGDLMLTLIEVLGPELDKKATVICRHNVMGIVEGVIKTSAILQ 1442          
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: A0A1V9YEE9_9STRA (Spindle pole body component n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEE9_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.360e-10
Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    9 LEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKA 94
            L + +    +A ++  +  TNA ++ ++   Y+L  H R LK++LL GQGD +  L+++LGPEL KRAT  YRHN++ ++E  + A
Sbjct:  419 LTFDHWMEFQAWIDRAARETNAYVIKILLDKYQLLDHCRALKQYLLLGQGDFIQYLMDLLGPELSKRATQLYRHNLMNVLETALNA 504          
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: K3WEA1_GLOUD (Spindle pole body component n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEA1_GLOUD)

HSP 1 Score: 66.6 bits (161), Expect = 2.580e-10
Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    9 LEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKA 94
            + +    +L  ++E  S  TN  L+  +   Y+L  H R LK++LL GQGD +  L+++LGPEL KRAT  YRH +  ++E  + +
Sbjct:  620 VHFAELINLEIMIEKVSKTTNEYLIRTLNEKYQLVDHCRALKRYLLLGQGDFIQYLMDLLGPELSKRATQIYRHTLTNVLETALNS 705          
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: A0A2D4C6X9_PYTIN (Spindle pole body component n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6X9_PYTIN)

HSP 1 Score: 66.2 bits (160), Expect = 3.470e-10
Identity = 32/86 (37.21%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    9 LEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKA 94
            + +   +SL A++E  SA TN  L+  +   Y L  H R L++++L GQGD +  L+++L PEL KRAT  +RH ++ ++E  + A
Sbjct:  451 VRFAQLSSLEAMIEQVSASTNEFLIRTLTDKYSLLDHCRALRRYMLLGQGDFIQYLMDLLRPELSKRATQVHRHTLMNVLETALNA 536          
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: W4G2J4_9STRA (Spindle pole body component n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2J4_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 4.570e-10
Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    6 ATRLEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKA 94
            AT L + + T  +  + + +  TN  +  ++ G Y+L  H R LK++LL GQGD +  L+++L PEL KRAT  YRHN++ ++E  + A
Sbjct:  233 ATNLTFDHWTEFQQWIAAAANETNNYVTKILLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQIYRHNLMSVLETALNA 321          
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: W4G4C6_9STRA (Spindle pole body component n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4C6_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 4.590e-10
Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    6 ATRLEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKA 94
            AT L + + T  +  + + +  TN  +  ++ G Y+L  H R LK++LL GQGD +  L+++L PEL KRAT  YRHN++ ++E  + A
Sbjct:  444 ATNLTFDHWTEFQQWIAAAANETNNYVTKILLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQIYRHNLMSVLETALNA 532          
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: W4G2F7_9STRA (Spindle pole body component n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2F7_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 4.720e-10
Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    6 ATRLEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKA 94
            AT L + + T  +  + + +  TN  +  ++ G Y+L  H R LK++LL GQGD +  L+++L PEL KRAT  YRHN++ ++E  + A
Sbjct:  444 ATNLTFDHWTEFQQWIAAAANETNNYVTKILLGKYQLLEHCRALKQYLLLGQGDFIQYLMDLLQPELSKRATQIYRHNLMSVLETALNA 532          
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Match: A0A2T3ACP1_9PEZI (Spindle pole body component n=1 Tax=Coniella lustricola TaxID=2025994 RepID=A0A2T3ACP1_9PEZI)

HSP 1 Score: 65.9 bits (159), Expect = 4.750e-10
Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 0
Query:    9 LEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLKKFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIK 93
            L YG+T +L A ++     T  RL+ LM   + L  HLR LK FLL GQGD ++ L+E L   LD+ A   YRH +   +EG I+
Sbjct:  476 LRYGDTATLEAWIDVAYKTTMQRLMDLMTNKFLLFKHLRALKSFLLMGQGDFVVLLMESLSANLDRPAGAQYRHTLTDKLEGAIR 560          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13303.2650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W3_ECTSI6.370e-4884.69Spindle pole body component n=1 Tax=Ectocarpus sil... [more]
D7G6W1_ECTSI4.950e-4586.87Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
D7G720_ECTSI3.380e-4385.71NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A1V9YEE9_9STRA1.360e-1038.37Spindle pole body component n=1 Tax=Achlya hypogyn... [more]
K3WEA1_GLOUD2.580e-1037.21Spindle pole body component n=1 Tax=Globisporangiu... [more]
A0A2D4C6X9_PYTIN3.470e-1037.21Spindle pole body component n=1 Tax=Pythium insidi... [more]
W4G2J4_9STRA4.570e-1038.20Spindle pole body component n=1 Tax=Aphanomyces as... [more]
W4G4C6_9STRA4.590e-1038.20Spindle pole body component n=1 Tax=Aphanomyces as... [more]
W4G2F7_9STRA4.720e-1038.20Spindle pole body component n=4 Tax=Aphanomyces as... [more]
A0A2T3ACP1_9PEZI4.750e-1042.35Spindle pole body component n=1 Tax=Coniella lustr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040457Gamma tubulin complex component, C-terminalPFAMPF04130GCP_C_terminalcoord: 42..95
e-value: 1.8E-9
score: 37.5
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 7..94
NoneNo IPR availablePANTHERPTHR19302:SF14GAMMA-TUBULIN COMPLEX COMPONENT 3coord: 7..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13303contigEcto-sp13_S_contig13303:1506..2406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13303.2650.1mRNA_Ecto-sp13_S_contig13303.2650.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13303 1506..2406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13303.2650.1 ID=prot_Ecto-sp13_S_contig13303.2650.1|Name=mRNA_Ecto-sp13_S_contig13303.2650.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
QAAAQATRLEYGNTTSLRAVVESCSALTNARLVHLMPGPYRLESHLRVLK
KFLLHGQGDLMLTLIEVLGPELDKRATVTYRHNVVGIIEGVIKAGAIFRT
KRKTLPGSESRLSAVRSLTRER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040457GCP_C
IPR007259GCP