prot_Ecto-sp13_S_contig13265.2627.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13265.2627.1
Unique Nameprot_Ecto-sp13_S_contig13265.2627.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13265.2627.1 vs. uniprot
Match: A0A6H5J7J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J8_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 8.730e-10
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:   49 EKYSDAIQLLERARSIQKDALGENHPDTVCTQNYLELVRKE 89
            E+Y+DA+ LLERA SI+   LGENHPDTV TQN L++VR++
Sbjct:    2 EQYTDAVPLLERALSIRMKKLGENHPDTVSTQNSLDVVRRK 42
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13265.2627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7J8_9PHAE8.730e-1063.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..89
e-value: 8.9E-9
score: 36.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..90
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13265contigEcto-sp13_S_contig13265:2382..3503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13265.2627.1mRNA_Ecto-sp13_S_contig13265.2627.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13265 2269..3607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13265.2627.1 ID=prot_Ecto-sp13_S_contig13265.2627.1|Name=mRNA_Ecto-sp13_S_contig13265.2627.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MAKANHATMAKAHRPMMATAVVRATTTAATPTTGTTTTKDLGKLSIKSEK
YSDAIQLLERARSIQKDALGENHPDTVCTQNYLELVRKEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf