mRNA_Ecto-sp13_S_contig13241.2613.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13241.2613.1
Unique NamemRNA_Ecto-sp13_S_contig13241.2613.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: D7FHU8_ECTSI (Cyclic nucleotide-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU8_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 1.060e-172
Identity = 247/250 (98.80%), Postives = 249/250 (99.60%), Query Frame = 1
Query:    1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
            MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQH EVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWF+VVRGAVRQNTEGMLGHTTMGGTQRLRRLAKER+VNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ
Sbjct:    1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHPEVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFNVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERLVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 250          
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A6H5L6F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F4_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 1.960e-118
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
Query:    1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVRQ 564
            MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVRQ
Sbjct:  645 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVRQ 832          
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A836CH43_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH43_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.170e-77
Identity = 148/275 (53.82%), Postives = 187/275 (68.00%), Query Frame = 1
Query:    1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWF-----SVVRGAVRQ-NTEG------------------MLGHTTMGGTQRLRRLA-KERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
            +Y RL FIFELASNFI+AHEDVDIL+++ EGPVAYQLA EK +QL++AR TL  QLPVFPELARSLKT+VAA+Y+LVQHR +V E + HGHINDRE   L+  NN +RVKL+YHP  D IPDR  LLK VPFLRFLTD ++  +I N  A  EEF GS++ LM  + +   G +R G       S V G+ R  N+ G                  ++   T+G    + ++  KER+++AGTV GLD+QL+++PY  TYTTASF HLFFFDK Q
Sbjct:  954 IYGRLAFIFELASNFIAAHEDVDILQIIKEGPVAYQLAFEKTKQLREARDTLVAQLPVFPELARSLKTQVAARYILVQHRGMVEESYRHGHINDREYARLLHSNNVSRVKLDYHPHTDHIPDRSQLLKGVPFLRFLTDADRETVIRNSAAVVEEFRGSHITLMRERSADVTGHKRSGCVRQVTKSFVMGSGRHANSTGSPYLGPLVSSEEVLPINCVINGDTIGRHGEVPQMVRKERLLHAGTVFGLDDQLLEIPYHSTYTTASFAHLFFFDKAQ 1228          
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A7S3UTA9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTA9_HETAK)

HSP 1 Score: 193 bits (491), Expect = 2.340e-55
Identity = 108/261 (41.38%), Postives = 160/261 (61.30%), Query Frame = 1
Query:    1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGAR-----------RQGWFSVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
            M  +L  +FELA+N+I A ED+D+L+++  GPVA +LALE   Q++ AR  L   LPVF E+AR++KTRV A+Y+LV+ RE+V E +H GH+N++E+E L+ E + AR+KL+YHP  D+   R  L+ ++PFLR L   E+   ++     +EEF+    VL+   M+ A   R           + G++ VVRG+VRQ      G  T            ER+++AGTV GLD+QL+ +PY+ TY  ASF H FFF+  +
Sbjct:   23 MSYKLGHLFELAANYIKAAEDIDVLDVVQAGPVANELALESLVQVRGAREALRTHLPVFAEIARAMKTRVTARYLLVKQRELVEEFYHTGHVNEKETEQLLHEIDRARIKLDYHPVTDKFLPRLALIGHLPFLRRLRPAERERFLDQADFVEEEFHAQGEVLIKEGMTKALQGRPPPAHGDMSGLKAGFYVVVRGSVRQTLYRSGGEKT------------ERLLHAGTVFGLDDQLLGIPYKATYQAASFCHCFFFNSER 271          
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 7.700e-55
Identity = 112/281 (39.86%), Postives = 164/281 (58.36%), Query Frame = 1
Query:    1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQG---WFSVVRGAVRQNT----------------EGMLGHTTMGGTQRLRRLA------------KERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
            ++++L F+FELASNFI+AHED+DILELL EG  A QLA E  +QL DA  TL  QLP FPE        VAA+++L +HRE VHE+F  G +N++E+E  +  N   ++KL+ HP A+ +P R  +L  VPFL+ L++++  +++N+++ CQEE +GSNVVL+            +G   W+ +VRG+V+  T                 G  G   MGG                    KE  ++AG V G+ + ++ +P+R TYT+ SFVHLFFFD+T 
Sbjct:  914 IFKKLAFVFELASNFIAAHEDIDILELLPEGDAANQLARENLKQLDDASGTLGHQLPAFPE--------VAARFLLAKHREFVHEMFLDGLLNEKEAETTLHVNTEFKIKLDDHPYAEHLPPRAVMLAKVPFLKSLSEDQVVQVVNDDRFCQEELHGSNVVLLRQSERVKHSGHNKGTTGWYYIVRGSVQMVTVSQERDSSSEAPHASGAGRKGGLFMGGDGHTTAAGGFEGEGGSSVKIKEHPLHAGAVFGMTDSMLGLPFRATYTSTSFVHLFFFDRTS 1186          
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A835Z8G2_9STRA (Sodium/hydrogen exchanger family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G2_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.890e-41
Identity = 97/255 (38.04%), Postives = 140/255 (54.90%), Query Frame = 1
Query:    1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLM-NAKMSFARGARRQ----GWFSVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
            ++ +L F+F LA NFI AHE +D+ +LL EG  A +LA                              +V+A++ML +HREVV EL   G IN+RE E L+  N  +   L  HP AD +P R  LL  VPFLR L DE+   I+ +E  C E+F+GSNVVL+ N   + A+G  +     GW+ +VRG V      M+    + G        +++V++AG V G+ +Q++  P+R  YTTASFVH+F+FDK +
Sbjct: 1000 VFEKLAFVFMLAKNFILAHEGIDMTDLLPEGAAAQRLA------------------------------QVSARFMLHRHREVVEELMRGGFINEREGEALLHRNAVSHTLLHDHPYADHLPPRTVLLSKVPFLRQLNDEDLKRIVEDESCCSEQFHGSNVVLIRNGAQTVAQGPNKSSGAAGWYYIVRGTVH-----MISENPVKGR-------RQQVLHAGAVFGMTDQMLGRPFRGAYTTASFVHVFYFDKDR 1212          
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A7S3JZM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM7_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.080e-32
Identity = 91/259 (35.14%), Postives = 144/259 (55.60%), Query Frame = 1
Query:    1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKN-VPFLRFLTDEEKAEIINNEKAC---QEEFYGSNVVLM--NAKMSFARGAR----RQGWFSVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKT 747
            ++RR  F+FE A  FI A++DVDI E++ +G     L  E   Q   A  T+   + VFP++A ++KT+VA +Y+LV+ + ++ EL  HG +++ E        N AR+KLE+HP  + +P    +LK+ +PFLR    +E  + +  + +    + E   S+V+L   + K    RG      R GWF VVRG+V  N +G+   T     + +       ++  G+VVGLDEQL+ +P+  +Y T S VHL FFD+T
Sbjct:  826 IFRRTAFVFEAAYVFIEAYKDVDIDEIVDDGAAKEALRTEIYNQCNAALHTIHDYIEVFPDVALAVKTQVATRYVLVRFQRILTELHEHGALSETELSRAEERINRARIKLEHHPVTEVVPLLNKILKSSIPFLRHPVPKEIIDRLCEDPSLAGIRSEIIPSHVLLAKRDRKKIEKRGDHIRKSRFGWFVVVRGSVIANFQGIDEDTFNSNEEGI-------LLTQGSVVGLDEQLLGIPFAASYWTLSLVHLIFFDRT 1077          
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: F0Y140_AURAN (Na_H_Exchanger domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y140_AURAN)

HSP 1 Score: 103 bits (257), Expect = 1.570e-21
Identity = 58/138 (42.03%), Postives = 88/138 (63.77%), Query Frame = 1
Query:    1 MYRRLMFIFELASNFISAHEDVDIL----ELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLR 402
            ++RR+ F+FE+A NFI AHEDV+      E++  GPV   L  E  +    A++T+++ + VFPE A ++KT+VAA ++LV+  E++ E   HGHI  +E        NAAR+KL  HP  +Q+P   TL+++VPFLR
Sbjct:  582 IFRRMAFVFEVAYNFIHAHEDVEHALAAEEIVDAGPVQEALVEEVAKMQAMAKATIAEYIDVFPESANAIKTQVAASFVLVRQHELMKESREHGHITAKELGECERHINAARIKLSQHPYTEQMPPIKTLVRDVPFLR 719          
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A7S1UK40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK40_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 6.480e-13
Identity = 56/203 (27.59%), Postives = 103/203 (50.74%), Query Frame = 1
Query:    1 MYRRLMFIFELASNFISAHE--DVDIL--------------ELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVR 561
            ++ RL F+  ++ NFI AHE   +D+               E +  G    ++ +E   +++ A + ++ Q  ++PE+ RS++T++AA+ +L + RE +  L++ G ++++E   L   N    VKLE HPAA  +P R  LL +V FL+ L+ E   E+++  K  +  F      ++        G   +GW+ + RG  R
Sbjct:  776 IHHRLEFVLTVSMNFIRAHECARIDLAQAVASAGKDTKEAREFVERGK---KIRMEAAEEMKAAEAWVNDQFDIYPEITRSIRTKMAARVLLREEREEIDRLYNAGLLDNQEHRKLSNSNTTCLVKLENHPAAMGVPRREELLHDVNFLQGLSQELFDEVVSMSK--ERNFRKDEEFIVE-------GTPSKGWYVITRGTCR 966          
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: W7TMP7_9STRA (Cyclic nucleotide-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMP7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 8.340e-7
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 1
Query:    7 RRLMFIFELASNFISAHEDVD--ILELLHE-GPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNA 318
            ++L F FELA  FI +H +    + EL  + GPV  QL  E   ++  A++ L + +PVFP++  S+KT +AA+YML + R ++      G +  RE E  I E +A
Sbjct:   46 KKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREVSA 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FHU8_ECTSI1.060e-17298.80Cyclic nucleotide-binding protein n=1 Tax=Ectocarp... [more]
A0A6H5L6F4_9PHAE1.960e-118100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CH43_9STRA1.170e-7753.82Sodium/hydrogen exchanger family-domain-containing... [more]
A0A7S3UTA9_HETAK2.340e-5541.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7G372_ECTSI7.700e-5539.86Sodium/hydrogen exchanger family n=1 Tax=Ectocarpu... [more]
A0A835Z8G2_9STRA1.890e-4138.04Sodium/hydrogen exchanger family n=1 Tax=Tribonema... [more]
A0A7S3JZM7_9STRA3.080e-3235.14Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y140_AURAN1.570e-2142.03Na_H_Exchanger domain-containing protein (Fragment... [more]
A0A7S1UK40_9STRA6.480e-1327.59Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
W7TMP7_9STRA8.340e-736.45Cyclic nucleotide-binding protein n=1 Tax=Nannochl... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13241contigEcto-sp13_S_contig13241:1444..4669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score203.8
Seed ortholog evalue9.7e-50
Seed eggNOG ortholog2880.D7G372
Model size750
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.potassium:proton antiporter activity
EggNOG OGsCOG0025@1,KOG1965@2759
Ec32 ortholog descriptionCyclic nucleotide-binding-like
Ec32 orthologEc-00_000510.1
Cds size750
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462708.147898-CDS-Ecto-sp13_S_contig13241:1443..16291681462708.147898-CDS-Ecto-sp13_S_contig13241:1443..1629Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13241 1444..1629 -
1681462708.1586967-CDS-Ecto-sp13_S_contig13241:2267..23751681462708.1586967-CDS-Ecto-sp13_S_contig13241:2267..2375Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13241 2268..2375 -
1681462708.1693559-CDS-Ecto-sp13_S_contig13241:3167..32551681462708.1693559-CDS-Ecto-sp13_S_contig13241:3167..3255Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13241 3168..3255 -
1681462708.178593-CDS-Ecto-sp13_S_contig13241:3609..37701681462708.178593-CDS-Ecto-sp13_S_contig13241:3609..3770Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13241 3610..3770 -
1681462708.1873925-CDS-Ecto-sp13_S_contig13241:4462..46691681462708.1873925-CDS-Ecto-sp13_S_contig13241:4462..4669Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13241 4463..4669 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13241.2613.1prot_Ecto-sp13_S_contig13241.2613.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13241 1444..4669 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13241.2613.1

>prot_Ecto-sp13_S_contig13241.2613.1 ID=prot_Ecto-sp13_S_contig13241.2613.1|Name=mRNA_Ecto-sp13_S_contig13241.2613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp
MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARS
TLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGL
IAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKA
CQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVRQNTEGMLGHTTMG
GTQRLRRLAKERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ
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mRNA from alignment at Ecto-sp13_S_contig13241:1444..4669-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13241.2613.1 ID=mRNA_Ecto-sp13_S_contig13241.2613.1|Name=mRNA_Ecto-sp13_S_contig13241.2613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3226bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13241:1444..4669- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTACCGGAGGCTGATGTTCATCTTCGAGCTGGCCTCCAACTTCATCTC CGCCCACGAGGACGTGGACATCCTTGAACTTCTTCACGAGGGGCCGGTGG CCTACCAGCTGGCGCTCGAGAAGAACCGGCAGCTGCAGGACGCCAGGAGC ACGCTGTCCCAGCAGCTGCCGGTGTTCCCCGAGCTGGCCCGTTCGCTCAA GACTCGGGTGAGTTATTTTTTGTTGTTTCCTTGCGTCGTGTTATGTTATA CGTCATGTGTCATGTGACCACCCTACCCAGCAGCGGCCTGGTGACGTTGA TTGCTGCTGCTGCTGGTAATGGTAAGTTCTCGTGTAAGATTGTCTACTAG TACGTGTTTCTTTTTTCTTGCTGTGCGAGTTGATCAATATTTCCCCTTCG TCCGTGGTGCATGCAGGTGTGCGTGTTTTACGTGCGACCGTAGCTATTTA GCGGCAATGTGCAATTGTACCCATGGTCCATGTACGGGAACGGCCTTGCT TTGCGTGTTTTGGAAGGCTCAAGCCTCCCCGTGAGAAAGGCGCACAGAAA AGATGAACGACCCATCGAAAAAAAGACAAAGAGAACACATGCACACAGGC GCGCGCGGCGGGATACCCCAACGAATAGAAGGCGTGTTCGTTGCTGCTAT TCTGTTCCACTTTTTGGAAAGATAAAGAGTGACGCCTTTTCGTTGTTCGG CCGGCTGGCCCGGTCGATGCACATTCAAGAAACACCAGCACACACGCTTA GCGTGTCAGGCACCGGTATCGTTCCAAGAGCGTTTACCGCCCACTCCTCC TTTTCCCCCCCCACCCCATCCCCCCACCCCGTACAATCGACAATGACATG CGAACATCCGCATACATGCATGCATGCAACTGCTTGCCACGAACAACAGG TTGCGGCGAAGTACATGCTGGTGCAGCACCGAGAGGTTGTCCACGAGCTG TTCCACCACGGACACATCAACGACAGGGAGTCGGAGGGGCTTATCGCGGA GAACAACGCGGCGAGGGTGAAGCTGGAGTACCACCCTGCCGCCGACCAGA TCCCAGACAGGTGAGAAGCTTGTGACAGTGTACTGTATCAGGAATACACA TTCCGTGAGTGAAAGAGAGACTACCCGTTAGAGATACGACCGCAGTTTAA GGTCAAAGGGGAAGGGAACACAAAAAAAAGTATGCCCGGTGGATCAATGA TCAAACGACTCAGGGCGTAAGCAACAGGTGAGTGCAGGACAAGCAACAGA CGGGTATCCCCCCAACGTATCCCGGGTTACCCTACCCTCCGGCCCCGCTA CGCTTGCCTGTCGTTCTTGTATCTGTCCCCCTTGTGGTGTGTTGAGCCGC TCTCTTGGGCACGCGTGTCCTCCGTCCATGTGTGTTGTTTTTTCCTTCTG TTTCCGGGCGGCAGGTTCACCCTTCTGAAGAACGTTCCCTTCCTGAGGTT CCTCACGGACGAGGAGAAGGCGGAGATCATCAATAACGAGAAGGCCTGTC AGGTGTGTTTCGTGGATCGTGGTTGTGTTTTGCGGTTGTGCTTGTTTGTG TGTCTTTGTTGTTAGCGTCGATGGCGCTAGCCCGCTGACCCATAAAACGA CGTCAGTCTCAGTGCGGTTGAAGACACAAAATAATGCATGTGTGGCGCGT GTGTGTGTTTTTTTTTTTGTTTCTCATTTGGCATCGACCACGCTAAGCGA CTGGCCAGTGAGAGTGAAAAAGGCGTGAGATCATCAGTCTTGCATCTTGT AGCGGGACCACCATCGCGAACACGATTTCTATTAATCAAAGGGTGTGTGT GTGCTGCCAGAGAGCACTGTCACCACCGCCGTCCGTGTTGTTAGCGTTGC TGGTGGTGTTGTGTTGCCCTTGGCAACAGTGCCGCTGCTTTTGATGTTCG AGTGCTGTTGCGCCACCCGTGTATTACCGATGTAGTCAACATGGAAAACA TCAAGAAACAAAATCGGTTCCGTTGGCCGGGAAAGGAAAAATCAGCATGG TGCTGTTTCATTTTTTTTTTCGCCGTGTTTTTTCGAAGCCGAGACATGAA CAGCGACATTGCCCAGACAAGGCTTTATGTGCAGGTCTTGGACCAATCGA TTATCTTTTTTTTTTTATGTTGGATGACTTTGTTGCCGCTCGCGAAAATC TGGCATGCGTGTGTCCATGCTTTGTTCTTTGGTGGCAGCATAATGATGAT GATGATGTTGTTGTCTTCGCTCGTCGCGTCTTGTCTCGCCCCATGTCTTT TTTTGTCGGTTGTGTTGTGGTGTGTACTTGGTTGTGTTGTGCAGGAGGAA TTCTACGGGTCCAACGTCGTGCTCATGAACGCGAAGATGAGCTTCGCCAG GGGGGCTCGCAGACAGGGCTGGTTCAGCGTCGTTCGAGGGGCCGTTCGTC AGGTACGCACGCATCATGCATACGTGTGTGCATGTGTACTTTTTTCTATT CGCTAGCATCTACCGTGCTGCTTTCACCGGTCTGACCAATCAAAAGACGT CCAGTGCCAGCGGATAGGTAGACTCAACGTCGGTCTTTGAAAGGGGGCCA CAGCTTGAAAAGCGCGCAACGCTTCTAATGGCAACGCCAAAACGAATAGC TCTACAAATCACATGGCGTGTGTTTGTGTCGTTTTGTCGTGGTCCGCGCC GCAACGGTGTTCCCGGGTAGGAAAAGAGACGGTACGTACGCCTCTACCTT ACCGCGACAAAAGAAAAAGCCGACAATAAACTTCGTAGTAGTCGTACGCT AGGTTTGTATTTGTGAGAAGCACAGCATACGTTTGAGGGGGTCGCGTGTG AGGGCGTCAGAACAGTGGAACCTCCGAGACAATTCAGATCTCATCCAAAG AGACAAGTCCGCTAGCTTTTGGCTGACAGACACCCAGCGGTCGTCGTAAC AACACACAGCGATGAGTCGACTTGTTCAATTCCGTGAAAGAAATCGGGGT TGTTCTTGCTGAATAAATACACACGCATGCCCCCCCCCCCTAGAATTGAC GAGCCCCCCTTTATTTCACACTGTCCATCAACACGCACAGAACACGGAGG GGATGCTTGGGCACACGACGATGGGGGGCACGCAGAGGCTCCGCAGGCTG GCGAAAGAGCGTGTCGTGAACGCTGGTACCGTCGTGGGCCTCGACGAACA GCTGATGCAGGTGCCGTACCGATGCACCTACACCACGGCATCCTTCGTGC ACCTCTTCTTCTTCGACAAGACTCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13241:1444..4669-

>mRNA_Ecto-sp13_S_contig13241.2613.1 ID=mRNA_Ecto-sp13_S_contig13241.2613.1|Name=mRNA_Ecto-sp13_S_contig13241.2613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13241:1444..4669- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTACCGGAGGCTGATGTTCATCTTCGAGCTGGCCTCCAACTTCATCTC
CGCCCACGAGGACGTGGACATCCTTGAACTTCTTCACGAGGGGCCGGTGG
CCTACCAGCTGGCGCTCGAGAAGAACCGGCAGCTGCAGGACGCCAGGAGC
ACGCTGTCCCAGCAGCTGCCGGTGTTCCCCGAGCTGGCCCGTTCGCTCAA
GACTCGGGTTGCGGCGAAGTACATGCTGGTGCAGCACCGAGAGGTTGTCC
ACGAGCTGTTCCACCACGGACACATCAACGACAGGGAGTCGGAGGGGCTT
ATCGCGGAGAACAACGCGGCGAGGGTGAAGCTGGAGTACCACCCTGCCGC
CGACCAGATCCCAGACAGGTTCACCCTTCTGAAGAACGTTCCCTTCCTGA
GGTTCCTCACGGACGAGGAGAAGGCGGAGATCATCAATAACGAGAAGGCC
TGTCAGGAGGAATTCTACGGGTCCAACGTCGTGCTCATGAACGCGAAGAT
GAGCTTCGCCAGGGGGGCTCGCAGACAGGGCTGGTTCAGCGTCGTTCGAG
GGGCCGTTCGTCAGAACACGGAGGGGATGCTTGGGCACACGACGATGGGG
GGCACGCAGAGGCTCCGCAGGCTGGCGAAAGAGCGTGTCGTGAACGCTGG
TACCGTCGTGGGCCTCGACGAACAGCTGATGCAGGTGCCGTACCGATGCA
CCTACACCACGGCATCCTTCGTGCACCTCTTCTTCTTCGACAAGACTCAG
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