mRNA_Ecto-sp13_S_contig13241.2613.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: D7FHU8_ECTSI (Cyclic nucleotide-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU8_ECTSI) HSP 1 Score: 485 bits (1248), Expect = 1.060e-172 Identity = 247/250 (98.80%), Postives = 249/250 (99.60%), Query Frame = 1
Query: 1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQH EVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWF+VVRGAVRQNTEGMLGHTTMGGTQRLRRLAKER+VNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ
Sbjct: 1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHPEVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFNVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERLVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 250
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A6H5L6F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F4_9PHAE) HSP 1 Score: 366 bits (940), Expect = 1.960e-118 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
Query: 1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVRQ 564
MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVRQ
Sbjct: 645 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVRQ 832
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A836CH43_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH43_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.170e-77 Identity = 148/275 (53.82%), Postives = 187/275 (68.00%), Query Frame = 1
Query: 1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWF-----SVVRGAVRQ-NTEG------------------MLGHTTMGGTQRLRRLA-KERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
+Y RL FIFELASNFI+AHEDVDIL+++ EGPVAYQLA EK +QL++AR TL QLPVFPELARSLKT+VAA+Y+LVQHR +V E + HGHINDRE L+ NN +RVKL+YHP D IPDR LLK VPFLRFLTD ++ +I N A EEF GS++ LM + + G +R G S V G+ R N+ G ++ T+G + ++ KER+++AGTV GLD+QL+++PY TYTTASF HLFFFDK Q
Sbjct: 954 IYGRLAFIFELASNFIAAHEDVDILQIIKEGPVAYQLAFEKTKQLREARDTLVAQLPVFPELARSLKTQVAARYILVQHRGMVEESYRHGHINDREYARLLHSNNVSRVKLDYHPHTDHIPDRSQLLKGVPFLRFLTDADRETVIRNSAAVVEEFRGSHITLMRERSADVTGHKRSGCVRQVTKSFVMGSGRHANSTGSPYLGPLVSSEEVLPINCVINGDTIGRHGEVPQMVRKERLLHAGTVFGLDDQLLEIPYHSTYTTASFAHLFFFDKAQ 1228
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A7S3UTA9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTA9_HETAK) HSP 1 Score: 193 bits (491), Expect = 2.340e-55 Identity = 108/261 (41.38%), Postives = 160/261 (61.30%), Query Frame = 1
Query: 1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGAR-----------RQGWFSVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
M +L +FELA+N+I A ED+D+L+++ GPVA +LALE Q++ AR L LPVF E+AR++KTRV A+Y+LV+ RE+V E +H GH+N++E+E L+ E + AR+KL+YHP D+ R L+ ++PFLR L E+ ++ +EEF+ VL+ M+ A R + G++ VVRG+VRQ G T ER+++AGTV GLD+QL+ +PY+ TY ASF H FFF+ +
Sbjct: 23 MSYKLGHLFELAANYIKAAEDIDVLDVVQAGPVANELALESLVQVRGAREALRTHLPVFAEIARAMKTRVTARYLLVKQRELVEEFYHTGHVNEKETEQLLHEIDRARIKLDYHPVTDKFLPRLALIGHLPFLRRLRPAERERFLDQADFVEEEFHAQGEVLIKEGMTKALQGRPPPAHGDMSGLKAGFYVVVRGSVRQTLYRSGGEKT------------ERLLHAGTVFGLDDQLLGIPYKATYQAASFCHCFFFNSER 271
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI) HSP 1 Score: 199 bits (507), Expect = 7.700e-55 Identity = 112/281 (39.86%), Postives = 164/281 (58.36%), Query Frame = 1
Query: 1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQG---WFSVVRGAVRQNT----------------EGMLGHTTMGGTQRLRRLA------------KERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
++++L F+FELASNFI+AHED+DILELL EG A QLA E +QL DA TL QLP FPE VAA+++L +HRE VHE+F G +N++E+E + N ++KL+ HP A+ +P R +L VPFL+ L++++ +++N+++ CQEE +GSNVVL+ +G W+ +VRG+V+ T G G MGG KE ++AG V G+ + ++ +P+R TYT+ SFVHLFFFD+T
Sbjct: 914 IFKKLAFVFELASNFIAAHEDIDILELLPEGDAANQLARENLKQLDDASGTLGHQLPAFPE--------VAARFLLAKHREFVHEMFLDGLLNEKEAETTLHVNTEFKIKLDDHPYAEHLPPRAVMLAKVPFLKSLSEDQVVQVVNDDRFCQEELHGSNVVLLRQSERVKHSGHNKGTTGWYYIVRGSVQMVTVSQERDSSSEAPHASGAGRKGGLFMGGDGHTTAAGGFEGEGGSSVKIKEHPLHAGAVFGMTDSMLGLPFRATYTSTSFVHLFFFDRTS 1186
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A835Z8G2_9STRA (Sodium/hydrogen exchanger family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G2_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.890e-41 Identity = 97/255 (38.04%), Postives = 140/255 (54.90%), Query Frame = 1
Query: 1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLM-NAKMSFARGARRQ----GWFSVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKTQ 750
++ +L F+F LA NFI AHE +D+ +LL EG A +LA +V+A++ML +HREVV EL G IN+RE E L+ N + L HP AD +P R LL VPFLR L DE+ I+ +E C E+F+GSNVVL+ N + A+G + GW+ +VRG V M+ + G +++V++AG V G+ +Q++ P+R YTTASFVH+F+FDK +
Sbjct: 1000 VFEKLAFVFMLAKNFILAHEGIDMTDLLPEGAAAQRLA------------------------------QVSARFMLHRHREVVEELMRGGFINEREGEALLHRNAVSHTLLHDHPYADHLPPRTVLLSKVPFLRQLNDEDLKRIVEDESCCSEQFHGSNVVLIRNGAQTVAQGPNKSSGAAGWYYIVRGTVH-----MISENPVKGR-------RQQVLHAGAVFGMTDQMLGRPFRGAYTTASFVHVFYFDKDR 1212
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A7S3JZM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM7_9STRA) HSP 1 Score: 134 bits (338), Expect = 3.080e-32 Identity = 91/259 (35.14%), Postives = 144/259 (55.60%), Query Frame = 1
Query: 1 MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKN-VPFLRFLTDEEKAEIINNEKAC---QEEFYGSNVVLM--NAKMSFARGAR----RQGWFSVVRGAVRQNTEGMLGHTTMGGTQRLRRLAKERVVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDKT 747
++RR F+FE A FI A++DVDI E++ +G L E Q A T+ + VFP++A ++KT+VA +Y+LV+ + ++ EL HG +++ E N AR+KLE+HP + +P +LK+ +PFLR +E + + + + + E S+V+L + K RG R GWF VVRG+V N +G+ T + + ++ G+VVGLDEQL+ +P+ +Y T S VHL FFD+T
Sbjct: 826 IFRRTAFVFEAAYVFIEAYKDVDIDEIVDDGAAKEALRTEIYNQCNAALHTIHDYIEVFPDVALAVKTQVATRYVLVRFQRILTELHEHGALSETELSRAEERINRARIKLEHHPVTEVVPLLNKILKSSIPFLRHPVPKEIIDRLCEDPSLAGIRSEIIPSHVLLAKRDRKKIEKRGDHIRKSRFGWFVVVRGSVIANFQGIDEDTFNSNEEGI-------LLTQGSVVGLDEQLLGIPFAASYWTLSLVHLIFFDRT 1077
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: F0Y140_AURAN (Na_H_Exchanger domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y140_AURAN) HSP 1 Score: 103 bits (257), Expect = 1.570e-21 Identity = 58/138 (42.03%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 1 MYRRLMFIFELASNFISAHEDVDIL----ELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLR 402
++RR+ F+FE+A NFI AHEDV+ E++ GPV L E + A++T+++ + VFPE A ++KT+VAA ++LV+ E++ E HGHI +E NAAR+KL HP +Q+P TL+++VPFLR
Sbjct: 582 IFRRMAFVFEVAYNFIHAHEDVEHALAAEEIVDAGPVQEALVEEVAKMQAMAKATIAEYIDVFPESANAIKTQVAASFVLVRQHELMKESREHGHITAKELGECERHINAARIKLSQHPYTEQMPPIKTLVRDVPFLR 719
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: A0A7S1UK40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK40_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 6.480e-13 Identity = 56/203 (27.59%), Postives = 103/203 (50.74%), Query Frame = 1
Query: 1 MYRRLMFIFELASNFISAHE--DVDIL--------------ELLHEGPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNAARVKLEYHPAADQIPDRFTLLKNVPFLRFLTDEEKAEIINNEKACQEEFYGSNVVLMNAKMSFARGARRQGWFSVVRGAVR 561
++ RL F+ ++ NFI AHE +D+ E + G ++ +E +++ A + ++ Q ++PE+ RS++T++AA+ +L + RE + L++ G ++++E L N VKLE HPAA +P R LL +V FL+ L+ E E+++ K + F ++ G +GW+ + RG R
Sbjct: 776 IHHRLEFVLTVSMNFIRAHECARIDLAQAVASAGKDTKEAREFVERGK---KIRMEAAEEMKAAEAWVNDQFDIYPEITRSIRTKMAARVLLREEREEIDRLYNAGLLDNQEHRKLSNSNTTCLVKLENHPAAMGVPRREELLHDVNFLQGLSQELFDEVVSMSK--ERNFRKDEEFIVE-------GTPSKGWYVITRGTCR 966
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Match: W7TMP7_9STRA (Cyclic nucleotide-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMP7_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 8.340e-7 Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 7 RRLMFIFELASNFISAHEDVD--ILELLHE-GPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHREVVHELFHHGHINDRESEGLIAENNA 318
++L F FELA FI +H + + EL + GPV QL E ++ A++ L + +PVFP++ S+KT +AA+YML + R ++ G + RE E I E +A
Sbjct: 46 KKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREVSA 152 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13241.2613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13241.2613.1 >prot_Ecto-sp13_S_contig13241.2613.1 ID=prot_Ecto-sp13_S_contig13241.2613.1|Name=mRNA_Ecto-sp13_S_contig13241.2613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp MYRRLMFIFELASNFISAHEDVDILELLHEGPVAYQLALEKNRQLQDARSback to top mRNA from alignment at Ecto-sp13_S_contig13241:1444..4669- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13241.2613.1 ID=mRNA_Ecto-sp13_S_contig13241.2613.1|Name=mRNA_Ecto-sp13_S_contig13241.2613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3226bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13241:1444..4669- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13241:1444..4669- >mRNA_Ecto-sp13_S_contig13241.2613.1 ID=mRNA_Ecto-sp13_S_contig13241.2613.1|Name=mRNA_Ecto-sp13_S_contig13241.2613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13241:1444..4669- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |