prot_Ecto-sp13_S_contig13231.2608.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13231.2608.1
Unique Nameprot_Ecto-sp13_S_contig13231.2608.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length207
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13231.2608.1 vs. uniprot
Match: D8LLA2_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA2_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 4.460e-49
Identity = 125/214 (58.41%), Postives = 137/214 (64.02%), Query Frame = 0 
Query:    1 MQDNGGIGANTPRPLAQSNSDKPELQSEKGTEQQRQPEDGSRLRARRVGNLRTLALVLREAEDAICAGERGGQDDRGSGGRVVDRHRAQASLSPVASDQFRRRKAEEVMAGDQDALASTCCLRPFWEAIQLG-----FLVRAAAGGRASTGRRAILGGYCRGGGRGTHPDGRGDRTGGLRRGVRADHRRQEKARRRPAVH--CGKELVLKGPLQ 207
            +Q++ G+GANTPRPLA  NSDK ELQSEKGTEQQRQPEDGSRLRARRVG L  LALVLREAEDAICAGERGGQDDRGSGG VVD+HRAQASLSPVA DQ  R+ AEEV AGD DALA    L    EAI  G     F  +         G  A L         G    G     GG   GV  +    E+ +R  A+    G+ELVLKGPLQ
Sbjct:  791 VQEDSGVGANTPRPLAIGNSDKSELQSEKGTEQQRQPEDGSRLRARRVGKLNALALVLREAEDAICAGERGGQDDRGSGGSVVDKHRAQASLSPVADDQSGRQTAEEVKAGDGDALA----LDMLSEAILGGDFNRDFSYKQRREAELQQGGVAFLADITEAEDAGLIQMGEVVGRGGY--GVVCEVTIVERRKRAAALRYTAGRELVLKGPLQ 998
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BLAST of mRNA_Ecto-sp13_S_contig13231.2608.1 vs. uniprot
Match: A0A6H5L188_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L188_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.070e-18
Identity = 55/70 (78.57%), Postives = 58/70 (82.86%), Query Frame = 0 
Query:    6 GIGANTPRPLAQSNSDKPELQSEKGTEQQRQP--EDGSRLRARRVGNLRTLALVLREAEDAICAGERGGQ 73
            G+ ANTPR LA  NSDK +LQSEKGTE+QRQ   EDGSRLRA RVG L  LALVLREAEDAICAGERGGQ
Sbjct:  791 GVDANTPRLLAIGNSDKSDLQSEKGTERQRQRQLEDGSRLRAWRVGKLSALALVLREAEDAICAGERGGQ 860
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13231.2608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLA2_ECTSI4.460e-4958.41N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5L188_9PHAE1.070e-1878.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13231contigEcto-sp13_S_contig13231:1956..2576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13231.2608.1mRNA_Ecto-sp13_S_contig13231.2608.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13231 374..2576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13231.2608.1 ID=prot_Ecto-sp13_S_contig13231.2608.1|Name=mRNA_Ecto-sp13_S_contig13231.2608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp
MQDNGGIGANTPRPLAQSNSDKPELQSEKGTEQQRQPEDGSRLRARRVGN
LRTLALVLREAEDAICAGERGGQDDRGSGGRVVDRHRAQASLSPVASDQF
RRRKAEEVMAGDQDALASTCCLRPFWEAIQLGFLVRAAAGGRASTGRRAI
LGGYCRGGGRGTHPDGRGDRTGGLRRGVRADHRRQEKARRRPAVHCGKEL
VLKGPLQ
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