prot_Ecto-sp13_S_contig13211.2600.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13211.2600.1
Unique Nameprot_Ecto-sp13_S_contig13211.2600.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length127
Homology
BLAST of mRNA_Ecto-sp13_S_contig13211.2600.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 1.200e-74
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0
Query:    3 LVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYKGPEDEKYLYEDTLDWDQNRLQACLSGGVAVGVLVPIAGLLHLGLFRLREALYRRVRDKEIAILKREHSLATEDASRHSLRVAASSEPL 126
            LVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFY GPEDEKYLYEDTLDWD+NRLQACLSGGVAVGVLVPIAGLLHLG+FRLREALYRRVRDKEIA LKREHSLATE ASRHSLRVAASS PL
Sbjct:  148 LVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFRLREALYRRVRDKEIATLKREHSLATEGASRHSLRVAASSVPL 271          
BLAST of mRNA_Ecto-sp13_S_contig13211.2600.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 2.920e-55
Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 0
Query:    3 LVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYKGPEDEKYLYEDTLDWDQNRLQACLSGGVAVGVLVPIAGLLHLGLFRLREALYRRVRDKEIAIL 101
            LVDQLLIADT+KLGHMIFTQIYGLVYLAFSV+WFYKGPEDEKYLYEDTLDW +NRLQACLSGGVAVGVLVPIAGLLHL +FRLREALY RVRDK+I  +
Sbjct:   66 LVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFRLREALYGRVRDKDIGYI 164          
BLAST of mRNA_Ecto-sp13_S_contig13211.2600.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 3.060e-20
Identity = 42/88 (47.73%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    3 LVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYKGPEDEKYLYEDTLDWDQNRLQACLSGGVAVGVLVPIAGLLHLGLFRLREALY 90
            L+DQ L+AD +KL +++F Q +G++YL F+V W+Y  P+D++ +Y   LDW+ N L AC+    A+ V  P+ GL+HLGLFRLRE++Y
Sbjct:   46 LLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYI-ILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVY 132          
BLAST of mRNA_Ecto-sp13_S_contig13211.2600.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 4.050e-18
Identity = 40/90 (44.44%), Postives = 63/90 (70.00%), Query Frame = 0
Query:    1 IQLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYKGPEDEKYLYEDTLDWDQNRLQACLSGGVAVGVLVPIAGLLHLGLFRLREALY 90
            I L+DQ L+AD +KL +++F Q +G++Y+ F+V W+Y  P+D++ +Y   LDW+ N L AC+    A+ V  P+ GL+H G+FRLRE +Y
Sbjct:  169 IMLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYI-ILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVY 257          
BLAST of mRNA_Ecto-sp13_S_contig13211.2600.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 3.080e-11
Identity = 33/87 (37.93%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    4 VDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYKGPEDEKYLYEDTLDWDQNRLQACLSGGVAVGVLVPIAGLLHLGLFRLREALY 90
            +DQLL+A  ++   M+ + ++ +VY+AF++V+F   PEDE+ +Y   +DW ++   +     V   VLVP+ GL+H  +FRLRE +Y
Sbjct:  169 IDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQ-MDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIY 254          
BLAST of mRNA_Ecto-sp13_S_contig13211.2600.1 vs. uniprot
Match: D7G735_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G735_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.780e-11
Identity = 33/90 (36.67%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    1 IQLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYKGPEDEKYLYEDTLDWDQNRLQACLSGGVAVGVLVPIAGLLHLGLFRLREALY 90
            I  +DQLL+A  ++   M+ +  + +VY+AF++++F   PEDE+ +Y   +DW ++   +     V   VLVP+ GL+H  +FRLRE +Y
Sbjct:   77 IMAIDQLLVATKFERKQMLASFSFSIVYVAFNIIFFLTAPEDERVIYGQ-MDWGESVGNSAAFAAVVAFVLVPLGGLIHYCVFRLREYIY 165          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13211.2600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JVA0_9PHAE1.200e-7495.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX10_ECTSI2.920e-5588.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G734_ECTSI3.060e-2047.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSI9_9PHAE4.050e-1844.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMZ5_9PHAE3.080e-1137.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G735_ECTSI3.780e-1136.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 61..83
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13211contigEcto-sp13_S_contig13211:47..1829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13211.2600.1mRNA_Ecto-sp13_S_contig13211.2600.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13211 47..1829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13211.2600.1 ID=prot_Ecto-sp13_S_contig13211.2600.1|Name=mRNA_Ecto-sp13_S_contig13211.2600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=127bp
IQLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYKGPEDEKYLYEDT
LDWDQNRLQACLSGGVAVGVLVPIAGLLHLGLFRLREALYRRVRDKEIAI
LKREHSLATEDASRHSLRVAASSEPL*
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