prot_Ecto-sp13_S_contig13209.2599.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13209.2599.1
Unique Nameprot_Ecto-sp13_S_contig13209.2599.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: D8LRC0_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC0_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 8.310e-113
Identity = 202/218 (92.66%), Postives = 204/218 (93.58%), Query Frame = 0
Query:    1 MSGNINISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKDAAXXXXXXXXXXXXXXXEEVSLNGDDSVKEKKEXXXXXXXXXXXENTSDDGETKATV 217
            MSGNINISGTEPIDDPEYR +MPRVIGKVEGRGNGIKTVIFNV DLSLALKRDPGEVCKFFGTELGAQ    TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK K     XXXXXXXXXXXXXXXEEVSLNGDDS KEKK+XXXXXXXXXXXENTSDDGETK TV
Sbjct:    1 MSGNINISGTEPIDDPEYRYKMPRVIGKVEGRGNGIKTVIFNVMDLSLALKRDPGEVCKFFGTELGAQ----TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKXXXXXXXXXXXXXXXXXXXXEEVSLNGDDSAKEKKDXXXXXXXXXXXENTSDDGETKTTV 214          
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: A0A7S3DU57_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DU57_9STRA)

HSP 1 Score: 213 bits (543), Expect = 5.280e-67
Identity = 105/157 (66.88%), Postives = 126/157 (80.25%), Query Frame = 0
Query:    5 INISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKD 160
            INI+G  P+DDPEYR +MP V GK+EG GNGIKTV+ N+TD+  +L R PGEV KFFGTELGAQ+    RY+ E +RAIVNGAHT+A LQ L++KYVE FVLCPNC LPE++YKIK+  I+HKC ACGAKEMVDMSH+LC YI+   KKAKK K K+
Sbjct:    9 INIAGLTPVDDPEYRYKMPAVYGKIEGSGNGIKTVVPNITDVGTSLHRAPGEVNKFFGTELGAQS----RYSAETDRAIVNGAHTDAVLQDLINKYVEKFVLCPNCGLPETEYKIKSEVIYHKCAACGAKEMVDMSHRLCNYILAEDKKAKKDKGKN 161          
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: A0A7S1D9Q5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q5_CYCTE)

HSP 1 Score: 219 bits (559), Expect = 1.140e-66
Identity = 107/158 (67.72%), Postives = 129/158 (81.65%), Query Frame = 0
Query:    5 INISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-GKDKD 160
            INI+GT P+DDPEYR +MP V GK+EGRGNGIKTVI N++D+ L+L R+ GEV KFFGTELGAQ    T YN + +RA+VNGAHT+ TLQ L+H+Y+E FVLCPNC LPE++YKIKN  I+HKC ACG+K+MVDMSHKLCTYI+   KKAKK  K KD
Sbjct:    9 INIAGTNPVDDPEYRYKMPAVYGKIEGRGNGIKTVIPNISDVGLSLHREAGEVTKFFGTELGAQ----TTYNPDTDRAVVNGAHTDDTLQDLMHRYIEKFVLCPNCSLPETEYKIKNDCIYHKCAACGSKDMVDMSHKLCTYILAQDKKAKKEAKSKD 162          
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: B7G289_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G289_PHATC)

HSP 1 Score: 219 bits (557), Expect = 2.520e-66
Identity = 107/156 (68.59%), Postives = 125/156 (80.13%), Query Frame = 0
Query:    5 INISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDK 159
            INISG  P+DDPEYR +MP V GK+EG GNGIKTVI N+T+++L+L R PGEV KFFGTELGAQ    TRY+ E +RA+VNGAH +A LQ L+H+Y+E FVLCPNC LPE+ YKIKN AI+HKC ACGAKEMVDMSHKLC YI+   KKAKK   K
Sbjct:    9 INISGASPVDDPEYRYKMPAVFGKIEGSGNGIKTVIPNITEVALSLHRQPGEVNKFFGTELGAQ----TRYSAETDRAVVNGAHMDAVLQDLMHRYIERFVLCPNCNLPETDYKIKNDAIWHKCAACGAKEMVDMSHKLCNYILAEDKKAKKDSKK 160          
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: B8BW00_THAPS (W2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW00_THAPS)

HSP 1 Score: 218 bits (556), Expect = 2.810e-66
Identity = 104/151 (68.87%), Postives = 125/151 (82.78%), Query Frame = 0
Query:    5 INISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAK 154
            +NISGT P+DDPEYR +MP V GK+EG+GNGIKTVI N++D+ L+L RD GEV KFFG ELGAQ    T YN E +RA+VNGAHT+  LQQ+VHKY+ELFVLCPNCRLPE++YKIK+G I+HKC ACG K+ VDM+HKLCTYI+   KKAK
Sbjct:    8 VNISGTTPVDDPEYRYKMPTVYGKIEGKGNGIKTVIPNISDVGLSLHRDAGEVNKFFGCELGAQ----TTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPETEYKIKSGMIYHKCAACGNKDAVDMTHKLCTYILAQDKKAK 154          
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: A0A7S2KDW7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KDW7_9STRA)

HSP 1 Score: 217 bits (553), Expect = 5.750e-66
Identity = 106/151 (70.20%), Postives = 124/151 (82.12%), Query Frame = 0
Query:    5 INISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAK 154
            INISGT P+DDPEYR +MP+V+GK+EGRGNG KTVI N+++L+L+L RDPGEV KFFGTELGAQ    T Y++E  RA+VNG HT+A LQQ VHKYVE FV+CPNC LPE+ YKIK+G I HKC ACGAKEMVDMSHKL  YI+   KKAK
Sbjct:    7 INISGTSPVDDPEYRYKMPKVVGKLEGRGNGSKTVIVNISELALSLHRDPGEVNKFFGTELGAQ----TTYSDETNRAVVNGHHTDAVLQQAVHKYVEAFVICPNCGLPETDYKIKSGVITHKCAACGAKEMVDMSHKLTNYILAQDKKAK 153          
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: A0A1Z5JLW0_FISSO (Translation initiation factor 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLW0_FISSO)

HSP 1 Score: 216 bits (549), Expect = 2.760e-65
Identity = 103/156 (66.03%), Postives = 127/156 (81.41%), Query Frame = 0
Query:    5 INISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDK 159
            INI+GT P+DDP YR +MP V GK+EG GNGIKTV+ NV D++ +L R+PGEV KFFGTE+GAQ+    RY+ + +RAIVNGAHT+ATLQ+L+H+Y+E FVLCP CRLPE+KYKIK+  I+H C ACGAK+MVDMSHKLC YI+   KKAKK K K
Sbjct:    9 INIAGTTPVDDPAYRYKMPAVFGKIEGSGNGIKTVLVNVLDVANSLHREPGEVSKFFGTEMGAQS----RYSADTDRAIVNGAHTDATLQELMHRYIEKFVLCPTCRLPETKYKIKSDTIYHSCAACGAKDMVDMSHKLCNYILAENKKAKKDKGK 160          
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: A0A7S3LEE8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEE8_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.040e-64
Identity = 105/157 (66.88%), Postives = 127/157 (80.89%), Query Frame = 0
Query:    5 INISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-GKDK 159
            IN++GT PIDDPEYR +MP V GK+EG GNGIKTVI N+TD+  +L R P EV KFFGTELGAQ    TRY+ E +RAI+NGAHT+ATLQ+L+ +Y++ FVLCPNC LPE++YKIK+  +FHKC ACGAKEMVDMSHKLC +I+   KKAKK GK K
Sbjct:    9 INLAGTTPIDDPEYRYKMPAVFGKIEGSGNGIKTVIPNITDVGTSLHRSPAEVNKFFGTELGAQ----TRYSAETDRAIINGAHTDATLQELIKRYIDKFVLCPNCNLPETEYKIKSDTVFHKCMACGAKEMVDMSHKLCNFILAENKKAKKDGKGK 161          
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: A0A7S3V5E2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5E2_9STRA)

HSP 1 Score: 212 bits (540), Expect = 7.590e-64
Identity = 102/155 (65.81%), Postives = 125/155 (80.65%), Query Frame = 0
Query:    5 INISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKD 158
            INISGT P++DP YR +MP V+GK+EG+GNGIKTVI NV DL+L+L RDPGEV KFFG E+GAQ    T YNE D+RA+VNGAH++  LQ  VHKYVE FVLCPNC LPE++YKIK G I+H+C ACG+K+MVDM+HKLCTYI+   K+  K K+
Sbjct:    5 INISGTNPVEDPSYRYKMPSVMGKIEGKGNGIKTVIVNVYDLALSLHRDPGEVNKFFGCEMGAQ----TTYNETDDRAVVNGAHSDGELQGCVHKYVEKFVLCPNCGLPETEYKIKQGCIWHRCKACGSKDMVDMNHKLCTYILKKWKEDSKKKN 155          
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Match: A0A6V2MCK3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2MCK3_9STRA)

HSP 1 Score: 212 bits (540), Expect = 8.630e-64
Identity = 104/158 (65.82%), Postives = 127/158 (80.38%), Query Frame = 0
Query:    5 INISGTEPIDDPEYR-RMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-GKDKD 160
            INISG  P+DDPEYR +MP V GK+EGRGNGIKTVI N+++++L+L R PGEV KFFG ELGAQ    T YN + +RA+VNGAHT++ LQ +VH+Y+E FVLCPNCRLPE+ YKIK+  I+HKC ACGAKEM++M HKLCTYI+   KKAKK  K KD
Sbjct:    8 INISGATPVDDPEYRYKMPTVYGKIEGRGNGIKTVIPNISEVALSLHRPPGEVNKFFGCELGAQ----TTYNADTDRAVVNGAHTDSVLQNMVHRYIEGFVLCPNCRLPETDYKIKSDTIYHKCAACGAKEMLNMQHKLCTYILAQDKKAKKDAKSKD 161          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13209.2599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRC0_ECTSI8.310e-11392.66W2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S3DU57_9STRA5.280e-6766.88Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1D9Q5_CYCTE1.140e-6667.72Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B7G289_PHATC2.520e-6668.59Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B8BW00_THAPS2.810e-6668.87W2 domain-containing protein n=1 Tax=Thalassiosira... [more]
A0A7S2KDW7_9STRA5.750e-6670.20Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5JLW0_FISSO2.760e-6566.03Translation initiation factor 5 n=2 Tax=Fistulifer... [more]
A0A7S3LEE8_9STRA1.040e-6466.88Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3V5E2_9STRA7.590e-6465.81Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6V2MCK3_9STRA8.630e-6465.82Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 159..183
NoneNo IPR availableGENE3D3.30.30.50coord: 25..105
e-value: 6.1E-23
score: 82.6
NoneNo IPR availableGENE3D2.20.25.350coord: 106..149
e-value: 7.4E-15
score: 56.4
NoneNo IPR availablePANTHERPTHR23001EUKARYOTIC TRANSLATION INITIATION FACTORcoord: 5..210
NoneNo IPR availablePANTHERPTHR23001:SF7EUKARYOTIC TRANSLATION INITIATION FACTOR 5coord: 5..210
IPR002735Translation initiation factor IF2/IF5SMARTSM00653eIF2Bneu4coord: 17..133
e-value: 1.1E-31
score: 121.3
IPR002735Translation initiation factor IF2/IF5PFAMPF01873eIF-5_eIF-2Bcoord: 19..133
e-value: 1.8E-27
score: 95.6
IPR016190Translation initiation factor IF2/IF5, zinc-bindingSUPERFAMILY75689Zinc-binding domain of translation initiation factor 2 betacoord: 103..137
IPR016189Translation initiation factor IF2/IF5, N-terminalSUPERFAMILY100966Translation initiation factor 2 beta, aIF2beta, N-terminal domaincoord: 17..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13209contigEcto-sp13_S_contig13209:1661..4395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13209.2599.1mRNA_Ecto-sp13_S_contig13209.2599.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13209 1661..4395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13209.2599.1 ID=prot_Ecto-sp13_S_contig13209.2599.1|Name=mRNA_Ecto-sp13_S_contig13209.2599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MSGNINISGTEPIDDPEYRRMPRVIGKVEGRGNGIKTVIFNVTDLSLALK
RDPGEVCKFFGTELGAQARRPTRYNEEDERAIVNGAHTNATLQQLVHKYV
ELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTA
KKAKKGKDKDAAKDSKERKREKKEKKKEEVSLNGDDSVKEKKEKRKKDKK
KRDKENTSDDGETKATVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002735Transl_init_fac_IF2/IF5
IPR016190Transl_init_fac_IF2/IF5_Zn-bd
IPR016189Transl_init_fac_IF2/IF5_N