prot_Ecto-sp13_S_contig13208.2598.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13208.2598.1
Unique Nameprot_Ecto-sp13_S_contig13208.2598.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length186
Homology
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: D8LLM1_ECTSI (Cycline T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM1_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 1.350e-126
Identity = 182/186 (97.85%), Postives = 185/186 (99.46%), Query Frame = 0
Query:    1 MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGRGADKALNRQLSQVST 186
            MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPP+ENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGG+GADKALNRQLSQ +T
Sbjct:    1 MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPAENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAAT 186          
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A6H5JMA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA6_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 2.610e-122
Identity = 181/186 (97.31%), Postives = 184/186 (98.92%), Query Frame = 0
Query:    1 MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGRGADKALNRQLSQVST 186
            MPNLRATKLYT+DQIRNSPSRKDGVSEALENDYRR TGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGG+GADKALNRQLSQ +T
Sbjct:   14 MPNLRATKLYTMDQIRNSPSRKDGVSEALENDYRRTTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAAT 199          
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A6V1NFC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NFC1_HETAK)

HSP 1 Score: 147 bits (371), Expect = 1.760e-40
Identity = 86/184 (46.74%), Postives = 111/184 (60.33%), Query Frame = 0
Query:    4 LRATKLYTVDQI--RNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGRGADKALNRQLSQVS 185
            +  +  Y  D I  RNSPSRKDG+SE  E  YRRKT  FI  AG  L+LP   VATA VFFH+FF   SF++H+RF V +ACL LA KVEES K++E V +    V + G     +  +  K  +EKIL  ER +LHT+GF + +EHPY  ++ + KKL    KG  GG   D A  RQ +Q +
Sbjct:    1 MEGSSWYFSDDILRRNSPSRKDGISEEREKGYRRKTCFFIDEAGNSLKLPKLTVATAHVFFHRFFARQSFKQHDRFDVAAACLHLAGKVEESPKKLEVVAATCHAVRHRGAKTLEKESEESKIAKEKILTCERILLHTMGFDMCIEHPYKYLIEVCKKL--KNKGIIGGN-QDDAGGRQFAQTA 181          
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S0PZF2_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZF2_9EUKA)

HSP 1 Score: 134 bits (338), Expect = 9.320e-35
Identity = 67/159 (42.14%), Postives = 109/159 (68.55%), Query Frame = 0
Query:   11 TVDQIRNSPSRKDGVSEA---------LENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKL 160
            T +QI NSPSRK  +S+A          E +YRR T  F++ +G++L LP   +ATA+VF+H+FF   S++ ++RF + + CLFLA+KVEE+ K+++ V+++++K+ N  +  P    + FK L+E+IL++ER +L TLGF LTVEHPY  +++ +K +
Sbjct:   24 TKEQIENSPSRKYLLSKANGDLEKAKHKETEYRRLTCAFLQESGQKLRLPQLTIATAIVFYHRFFAHKSYEGYDRFTIATTCLFLASKVEETPKKLKDVVTETYKIQNAPKAAPEPESQDFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSI 182          
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S2H2I1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2I1_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.080e-33
Identity = 65/154 (42.21%), Postives = 98/154 (63.64%), Query Frame = 0
Query:   12 VDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSE-NEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMG 164
             D +R SPSR D +SE  E  YRR+T + ++ AG+ L+ P  A ATA VFFH+F+ LHSF+K +RF +   CLFLA KVEE  +++E ++    ++WN    P  + + + +++LRE +L  ER +LHT+ F L V+HPY  +  ++K L   G
Sbjct:    8 ADFLRQSPSRADDISEEGEKRYRRETVINMEKAGESLKFPRAAKATAQVFFHRFYALHSFKKFQRFDIAVTCLFLAGKVEEHPRKLETIIQCCHQIWNRLLQPTLKLDSEDYEKLRETMLRTERQLLHTMAFDLCVKHPYKDLFEIVKNLCQKG 161          
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A1E7FTI4_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTI4_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.010e-32
Identity = 63/147 (42.86%), Postives = 96/147 (65.31%), Query Frame = 0
Query:   19 PSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGK 165
            PS   G+S   E   RRKT  FI+ AG+ L+LP  A++TA+VFFH+F+  H+FQ+H+RF V  A L LAAK EE+ K++  V+ + +K+            + F +L+E+IL+ ER +LHT+GF+L+++HPY   + ++KKL  M K
Sbjct:    1 PSITKGMSSIEEAMKRRKTCRFIEEAGRVLKLPRVAISTAMVFFHRFYAKHAFQEHDRFEVAVAALVLAAKTEEAPKKLNTVIQECYKLKARAMQAGHTKGEDFLKLKERILLLERIILHTIGFELSIDHPYKFFVDMIKKLIIMSK 147          
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S0J0B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J0B8_9EUKA)

HSP 1 Score: 128 bits (321), Expect = 3.280e-32
Identity = 67/159 (42.14%), Postives = 107/159 (67.30%), Query Frame = 0
Query:   11 TVDQIRNSPSRK-------DGVSEA--LENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKL 160
            T +QI +SPSRK       + V +A   E  YRR T  F++ +G++L LP   +ATA+VF+H+FF   S++   RF + + CLFLA+KVEE+ K+++ V+ +++K+ N  + PP  + + FK L+E+IL++ER +L TLGF LTVEHPY  +++ +K +
Sbjct:   26 TKEQIDSSPSRKYLLKKCGNDVEKAHNSETQYRRLTCAFLQESGQKLRLPQLTIATAIVFYHRFFAHKSYESFCRFTIATTCLFLASKVEETPKKLKDVVIETFKIQNTPKPPPEPDSQEFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSI 184          
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A1Z5JU78_FISSO (Cyclin T n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU78_FISSO)

HSP 1 Score: 125 bits (313), Expect = 1.160e-31
Identity = 68/160 (42.50%), Postives = 106/160 (66.25%), Query Frame = 0
Query:   10 YTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKV-WNGGR------DPPSENEKS--FKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKL 160
            + + Q+   PS +DG+S   E+  RRKT  FI+ +G+ L+LP  A+ATA+VFFH+F+  HSF +H+RF V  ACL LAAK EES K++  V+ +  K+ W G +       PP  + K   F +L+E++L+ ER +LHT+GF+L+++HPY  ++  +K+L
Sbjct:    6 FDISQL---PSLQDGMSIQEESMKRRKTCRFIEESGRILKLPRVAIATAMVFFHRFYAKHSFAQHDRFEVAVACLLLAAKTEESPKKLVVVLEECQKLKWRGMQAGSASVKPPDLDPKGEEFSKLKERVLLLERVILHTIGFELSIDHPYKFLVEQIKQL 162          
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S2B1V0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B1V0_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.120e-30
Identity = 67/154 (43.51%), Postives = 96/154 (62.34%), Query Frame = 0
Query:   13 DQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKS--FKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMG 164
            D +R SPSR D +SE  E   RR+T ++++ AG+ L+ P   +ATA VFFH+F+ L SF+K  RF +   CLFLA KVEE  +++E V+    ++WN   D P+ N  S  ++ LR  IL  ER +LHT+ F L V+HPY  ++  +KKL   G
Sbjct:    9 DFLRQSPSRADNISEEDEKRCRRRTAIYMEKAGEHLKFPRLTIATAQVFFHRFYALQSFKKFRRFDIAVTCLFLAGKVEEYPRKLESVIQMCHQIWNK-LDKPTLNPDSQDYEFLRLTILRTERQILHTIAFDLCVKHPYKDLIDTVKKLHQAG 161          
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S4QWB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWB2_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.000e-29
Identity = 67/185 (36.22%), Postives = 104/185 (56.22%), Query Frame = 0
Query:    2 PNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWN--------------------GGRDPP------SENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKL 160
            P  R    +   Q+   PS + G++ A E D RR+T  FI+ AG+ L+LP  AVATA+V FH+F+  HSF +H+RF   +A L LAAK EES K++  V+ +  ++ N                     GR+ P          K F +L+++IL+ ER +LHT+GF+L+++HPY  ++  +KK+
Sbjct:    9 PPRRVPHAFDESQL---PSLRHGLTTAQERDKRRRTCRFIEEAGRVLKLPRVAVATAMVLFHRFYAKHSFTEHDRFEAAAAALLLAAKTEESPKKLTHVIQECHRLKNRGLQKQKEVMAGAAATAAAAAGRNSPVPIGYLDTKGKEFAKLKDRILLLERVILHTIGFELSIDHPYKFLVEQVKKM 190          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLM1_ECTSI1.350e-12697.85Cycline T n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JMA6_9PHAE2.610e-12297.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1NFC1_HETAK1.760e-4046.74Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0PZF2_9EUKA9.320e-3542.14Hypothetical protein n=2 Tax=Coccolithus braarudii... [more]
A0A7S2H2I1_9STRA3.080e-3342.21Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A1E7FTI4_9STRA2.010e-3242.86Cyclin-like protein (Fragment) n=1 Tax=Fragilariop... [more]
A0A7S0J0B8_9EUKA3.280e-3242.14Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A1Z5JU78_FISSO1.160e-3142.50Cyclin T n=2 Tax=Fistulifera solaris TaxID=1519565... [more]
A0A7S2B1V0_9STRA4.120e-3043.51Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S4QWB2_9STRA2.000e-2936.22Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 39..138
e-value: 1.0E-5
score: 35.0
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 26..144
e-value: 1.2E-13
score: 51.0
NoneNo IPR availableGENE3D1.10.472.10coord: 3..145
e-value: 2.8E-40
score: 139.4
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 11..161
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 8..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13208contigEcto-sp13_S_contig13208:347..2950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13208.2598.1mRNA_Ecto-sp13_S_contig13208.2598.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13208 347..2950 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13208.2598.1 ID=prot_Ecto-sp13_S_contig13208.2598.1|Name=mRNA_Ecto-sp13_S_contig13208.2598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp
MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELEL
PVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQV
MSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPY
SVVMSLLKKLFTMGKGADGGRGADKALNRQLSQVST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR036915Cyclin-like_sf