mRNA_Ecto-sp13_S_contig13208.2598.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: D8LLM1_ECTSI (Cycline T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM1_ECTSI) HSP 1 Score: 364 bits (935), Expect = 1.350e-126 Identity = 182/186 (97.85%), Postives = 185/186 (99.46%), Query Frame = 1
Query: 1 MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGRGADKALNRQLSQVST 558
MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPP+ENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGG+GADKALNRQLSQ +T
Sbjct: 1 MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPAENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAAT 186
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A6H5JMA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA6_9PHAE) HSP 1 Score: 362 bits (929), Expect = 2.610e-122 Identity = 181/186 (97.31%), Postives = 184/186 (98.92%), Query Frame = 1
Query: 1 MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGRGADKALNRQLSQVST 558
MPNLRATKLYT+DQIRNSPSRKDGVSEALENDYRR TGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGG+GADKALNRQLSQ +T
Sbjct: 14 MPNLRATKLYTMDQIRNSPSRKDGVSEALENDYRRTTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAAT 199
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A6V1NFC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NFC1_HETAK) HSP 1 Score: 147 bits (371), Expect = 1.760e-40 Identity = 86/184 (46.74%), Postives = 111/184 (60.33%), Query Frame = 1
Query: 10 LRATKLYTVDQI--RNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGRGADKALNRQLSQVS 555
+ + Y D I RNSPSRKDG+SE E YRRKT FI AG L+LP VATA VFFH+FF SF++H+RF V +ACL LA KVEES K++E V + V + G + + K +EKIL ER +LHT+GF + +EHPY ++ + KKL KG GG D A RQ +Q +
Sbjct: 1 MEGSSWYFSDDILRRNSPSRKDGISEEREKGYRRKTCFFIDEAGNSLKLPKLTVATAHVFFHRFFARQSFKQHDRFDVAAACLHLAGKVEESPKKLEVVAATCHAVRHRGAKTLEKESEESKIAKEKILTCERILLHTMGFDMCIEHPYKYLIEVCKKL--KNKGIIGGN-QDDAGGRQFAQTA 181
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S0PZF2_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZF2_9EUKA) HSP 1 Score: 134 bits (338), Expect = 9.320e-35 Identity = 67/159 (42.14%), Postives = 109/159 (68.55%), Query Frame = 1
Query: 31 TVDQIRNSPSRKDGVSEA---------LENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKL 480
T +QI NSPSRK +S+A E +YRR T F++ +G++L LP +ATA+VF+H+FF S++ ++RF + + CLFLA+KVEE+ K+++ V+++++K+ N + P + FK L+E+IL++ER +L TLGF LTVEHPY +++ +K +
Sbjct: 24 TKEQIENSPSRKYLLSKANGDLEKAKHKETEYRRLTCAFLQESGQKLRLPQLTIATAIVFYHRFFAHKSYEGYDRFTIATTCLFLASKVEETPKKLKDVVTETYKIQNAPKAAPEPESQDFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSI 182
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S2H2I1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2I1_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.080e-33 Identity = 65/154 (42.21%), Postives = 98/154 (63.64%), Query Frame = 1
Query: 34 VDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSE-NEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMG 492
D +R SPSR D +SE E YRR+T + ++ AG+ L+ P A ATA VFFH+F+ LHSF+K +RF + CLFLA KVEE +++E ++ ++WN P + + + +++LRE +L ER +LHT+ F L V+HPY + ++K L G
Sbjct: 8 ADFLRQSPSRADDISEEGEKRYRRETVINMEKAGESLKFPRAAKATAQVFFHRFYALHSFKKFQRFDIAVTCLFLAGKVEEHPRKLETIIQCCHQIWNRLLQPTLKLDSEDYEKLRETMLRTERQLLHTMAFDLCVKHPYKDLFEIVKNLCQKG 161
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A1E7FTI4_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTI4_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.010e-32 Identity = 63/147 (42.86%), Postives = 96/147 (65.31%), Query Frame = 1
Query: 55 PSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGK 495
PS G+S E RRKT FI+ AG+ L+LP A++TA+VFFH+F+ H+FQ+H+RF V A L LAAK EE+ K++ V+ + +K+ + F +L+E+IL+ ER +LHT+GF+L+++HPY + ++KKL M K
Sbjct: 1 PSITKGMSSIEEAMKRRKTCRFIEEAGRVLKLPRVAISTAMVFFHRFYAKHAFQEHDRFEVAVAALVLAAKTEEAPKKLNTVIQECYKLKARAMQAGHTKGEDFLKLKERILLLERIILHTIGFELSIDHPYKFFVDMIKKLIIMSK 147
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S0J0B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J0B8_9EUKA) HSP 1 Score: 128 bits (321), Expect = 3.280e-32 Identity = 67/159 (42.14%), Postives = 107/159 (67.30%), Query Frame = 1
Query: 31 TVDQIRNSPSRK-------DGVSEA--LENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKL 480
T +QI +SPSRK + V +A E YRR T F++ +G++L LP +ATA+VF+H+FF S++ RF + + CLFLA+KVEE+ K+++ V+ +++K+ N + PP + + FK L+E+IL++ER +L TLGF LTVEHPY +++ +K +
Sbjct: 26 TKEQIDSSPSRKYLLKKCGNDVEKAHNSETQYRRLTCAFLQESGQKLRLPQLTIATAIVFYHRFFAHKSYESFCRFTIATTCLFLASKVEETPKKLKDVVIETFKIQNTPKPPPEPDSQEFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSI 184
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A1Z5JU78_FISSO (Cyclin T n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU78_FISSO) HSP 1 Score: 125 bits (313), Expect = 1.160e-31 Identity = 68/160 (42.50%), Postives = 106/160 (66.25%), Query Frame = 1
Query: 28 YTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKV-WNGGR------DPPSENEKS--FKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKL 480
+ + Q+ PS +DG+S E+ RRKT FI+ +G+ L+LP A+ATA+VFFH+F+ HSF +H+RF V ACL LAAK EES K++ V+ + K+ W G + PP + K F +L+E++L+ ER +LHT+GF+L+++HPY ++ +K+L
Sbjct: 6 FDISQL---PSLQDGMSIQEESMKRRKTCRFIEESGRILKLPRVAIATAMVFFHRFYAKHSFAQHDRFEVAVACLLLAAKTEESPKKLVVVLEECQKLKWRGMQAGSASVKPPDLDPKGEEFSKLKERVLLLERVILHTIGFELSIDHPYKFLVEQIKQL 162
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S2B1V0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B1V0_9STRA) HSP 1 Score: 122 bits (305), Expect = 4.120e-30 Identity = 67/154 (43.51%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 37 DQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKS--FKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMG 492
D +R SPSR D +SE E RR+T ++++ AG+ L+ P +ATA VFFH+F+ L SF+K RF + CLFLA KVEE +++E V+ ++WN D P+ N S ++ LR IL ER +LHT+ F L V+HPY ++ +KKL G
Sbjct: 9 DFLRQSPSRADNISEEDEKRCRRRTAIYMEKAGEHLKFPRLTIATAQVFFHRFYALQSFKKFRRFDIAVTCLFLAGKVEEYPRKLESVIQMCHQIWNK-LDKPTLNPDSQDYEFLRLTILRTERQILHTIAFDLCVKHPYKDLIDTVKKLHQAG 161
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Match: A0A7S4QWB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWB2_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.000e-29 Identity = 67/185 (36.22%), Postives = 104/185 (56.22%), Query Frame = 1
Query: 4 PNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWN--------------------GGRDPP------SENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKL 480
P R + Q+ PS + G++ A E D RR+T FI+ AG+ L+LP AVATA+V FH+F+ HSF +H+RF +A L LAAK EES K++ V+ + ++ N GR+ P K F +L+++IL+ ER +LHT+GF+L+++HPY ++ +KK+
Sbjct: 9 PPRRVPHAFDESQL---PSLRHGLTTAQERDKRRRTCRFIEEAGRVLKLPRVAVATAMVLFHRFYAKHSFTEHDRFEAAAAALLLAAKTEESPKKLTHVIQECHRLKNRGLQKQKEVMAGAAATAAAAAGRNSPVPIGYLDTKGKEFAKLKDRILLLERVILHTIGFELSIDHPYKFLVEQVKKM 190 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13208.2598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13208.2598.1 >prot_Ecto-sp13_S_contig13208.2598.1 ID=prot_Ecto-sp13_S_contig13208.2598.1|Name=mRNA_Ecto-sp13_S_contig13208.2598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELback to top mRNA from alignment at Ecto-sp13_S_contig13208:347..2950- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13208.2598.1 ID=mRNA_Ecto-sp13_S_contig13208.2598.1|Name=mRNA_Ecto-sp13_S_contig13208.2598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2604bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13208:347..2950- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13208:347..2950- >mRNA_Ecto-sp13_S_contig13208.2598.1 ID=mRNA_Ecto-sp13_S_contig13208.2598.1|Name=mRNA_Ecto-sp13_S_contig13208.2598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=558bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13208:347..2950- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |