prot_Ecto-sp13_S_contig13190.2587.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13190.2587.1
Unique Nameprot_Ecto-sp13_S_contig13190.2587.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length100
Homology
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: A0A6H5KSL7_9PHAE (NifU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL7_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 4.070e-56
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFAP 99
            ERRL+QRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFAP
Sbjct:  178 ERRLMQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFAP 276          
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: A0A835Z016_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z016_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.400e-38
Identity = 65/98 (66.33%), Postives = 86/98 (87.76%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFA 98
            ERRL+++IPEISEVVQS+P GP+L +E +EKVLDGVRPFLSVAGG+I++ +L GV  +QP I LKMTG S+SL+S++MEIMQR+QR FM+S LR+++A
Sbjct:   83 ERRLIEKIPEISEVVQSMPEGPQLNMEEIEKVLDGVRPFLSVAGGAISVAALEGVGGMQPHIALKMTGKSSSLQSVKMEIMQRLQRHFMLSGLRIDWA 180          
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: A0A7S2E835_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E835_TRICV)

HSP 1 Score: 129 bits (324), Expect = 5.280e-35
Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFA 98
            ER L +RIPEI EVVQS+P GP L VE V+ VLDGVRPFL VAGG+I+ +S+ G  S+QPVITLKM GSSASL S+++EI QR+QR FMMS LRVE+A
Sbjct:  167 ERGLRERIPEIQEVVQSLPEGPPLEVEQVDVVLDGVRPFLQVAGGTIDCESIRGEGSVQPVITLKMEGSSASLNSVKLEIAQRMQRHFMMSGLRVEWA 264          
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: A0A7S1H4I0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H4I0_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.410e-34
Identity = 61/98 (62.24%), Postives = 82/98 (83.67%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFA 98
            ER+L ++IPEI EVVQS+P GPEL  E +  VLDGVRPFL VAGGSI+++S++G + +QP ITLKM G+SASLKS+++EI QR+QR FM++ LRV++A
Sbjct:   85 ERKLREKIPEIQEVVQSMPEGPELCEEEINVVLDGVRPFLQVAGGSIDVESISGENGLQPTITLKMEGASASLKSVKLEIAQRLQRHFMVAGLRVDWA 182          
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: A0A7S2C848_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C848_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.820e-34
Identity = 62/97 (63.92%), Postives = 83/97 (85.57%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEF 97
            ERRL + IPEISEVVQ++P+ P LT E+V+ +L+G+RPFL VAGG I I+SLTGV SIQP + LKMTG+S+S++S+++EIMQRIQR FM+S LR++F
Sbjct:  147 ERRLKEAIPEISEVVQAMPDSPPLTEESVDGILEGIRPFLQVAGGKIEIESLTGVDSIQPQLVLKMTGASSSIQSVKLEIMQRIQRFFMISGLRIDF 243          
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: A0A7S1G1H4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1H4_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.840e-34
Identity = 64/98 (65.31%), Postives = 81/98 (82.65%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFA 98
            ERRL +RIPEI EVVQ++P GP L  + +  VLDGVRPFL+VAGGSI+I S++G  S+QPVITL+MTG+SASL S+++EI QRIQR FMMS LR+ +A
Sbjct:  138 ERRLKERIPEIQEVVQAMPEGPPLNEDQINVVLDGVRPFLNVAGGSIDIASISGEMSVQPVITLEMTGASASLNSVKLEIEQRIQRHFMMSGLRITWA 235          
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: A0A7R9U202_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U202_9STRA)

HSP 1 Score: 125 bits (315), Expect = 7.270e-34
Identity = 61/95 (64.21%), Postives = 80/95 (84.21%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRV 95
            ERRL +RIPEISEVVQ++P+ PEL+   VE VLDGVRPFL VAGGSI +Q ++GV  +QP+I LKM GSSA+L+S+++EIMQR+QR FM++ LR+
Sbjct:  147 ERRLKERIPEISEVVQAVPDAPELSEAGVESVLDGVRPFLQVAGGSITLQEISGVGGLQPMIVLKMEGSSATLQSVKVEIMQRLQRNFMVAGLRI 241          
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: K0SKZ0_THAOC (NifU domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKZ0_THAOC)

HSP 1 Score: 122 bits (307), Expect = 7.570e-33
Identity = 59/98 (60.20%), Postives = 81/98 (82.65%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFA 98
            ER+L++RIPEI EVVQ++P+ P+LT + +  VLD VRPFLSVAGG+I+I S++G   +QP ITLKM GS+ASL S+++EI QR+QR FM+S +RVE+A
Sbjct:  130 ERKLMERIPEIQEVVQALPDSPDLTEDQINVVLDSVRPFLSVAGGTIDIDSISGEGGLQPTITLKMDGSAASLNSVKLEIAQRLQRHFMISGMRVEWA 227          
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: A0A7S2K8U6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8U6_9STRA)

HSP 1 Score: 122 bits (307), Expect = 9.030e-33
Identity = 62/98 (63.27%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFA 98
            ER L +RIPEI EV+QSIP GPEL  E +E VL+GVRPFL VAGGSI+I S+TG   +QP I LKM G+SA+L S+++EI+QR+QR FM+S LRV++A
Sbjct:  137 ERGLKERIPEIQEVIQSIPEGPELCEEQIEVVLNGVRPFLQVAGGSIDIVSITGEGGMQPTILLKMGGASATLNSVKLEIVQRLQRHFMLSGLRVDWA 234          
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Match: A0A7S1D6Z8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6Z8_CYCTE)

HSP 1 Score: 121 bits (303), Expect = 4.490e-32
Identity = 60/98 (61.22%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    1 ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFA 98
            ERRL +RIPEI EV+Q++P GP+L  + V  VLDGVRPFL VAGG+I+I  + G+ S+QP ITLKM G+SASL S+++EI QR+QR FM++ LRVE+A
Sbjct:  146 ERRLRERIPEIQEVIQAMPQGPDLCDDEVNVVLDGVRPFLQVAGGTIDIVVIEGIGSLQPTITLKMEGASASLNSVKLEIAQRLQRHFMVAGLRVEWA 243          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13190.2587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL7_9PHAE4.070e-5698.99NifU domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z016_9STRA1.400e-3866.33NifU-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2E835_TRICV5.280e-3568.37Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1H4I0_9STRA1.410e-3462.24Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2C848_9STRA1.820e-3463.92Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1G1H4_9STRA2.840e-3465.31Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7R9U202_9STRA7.270e-3464.21Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K0SKZ0_THAOC7.570e-3360.20NifU domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S2K8U6_9STRA9.030e-3363.27Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1D6Z8_CYCTE4.490e-3261.22Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 22..96
e-value: 2.2E-19
score: 71.1
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 23..85
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 29..87
e-value: 3.7E-5
score: 23.8
NoneNo IPR availablePANTHERPTHR11178:SF39NIFU-LIKE PROTEIN 2, CHLOROPLASTICcoord: 1..85
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13190contigEcto-sp13_S_contig13190:2857..4798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13190.2587.1mRNA_Ecto-sp13_S_contig13190.2587.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13190 2857..4798 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13190.2587.1 ID=prot_Ecto-sp13_S_contig13190.2587.1|Name=mRNA_Ecto-sp13_S_contig13190.2587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
ERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQ
SLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034904FSCA_dom_sf
IPR001075NIF_FeS_clus_asmbl_NifU_C