prot_Ecto-sp13_S_contig13170.2572.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig13170.2572.1
Unique Name	prot_Ecto-sp13_S_contig13170.2572.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	249

Homology

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: D8LU47_ECTSI (T-complex protein 1 subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU47_ECTSI)

HSP 1 Score: 486 bits (1251), Expect = 3.800e-169
Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0

Query:    1 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            MSAPVMVLPVNTKRETGRAAQLGNI+AAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEML+VAEPILTRGVHPTQIVMGY RALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE
Sbjct:    1 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: A0A836CR16_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR16_9STRA)

HSP 1 Score: 399 bits (1024), Expect = 1.560e-134
Identity = 196/246 (79.67%), Postives = 220/246 (89.43%), Query Frame = 0

Query:    4 PVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            PVMVLP+NTKRETGR AQLGNISAAKAV++IIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEMLA AEP+L + +HPTQIV GY  ALQ AL+ C A+++ +D+ +   LK+LV+AAVGTKFSHRWGD LV MAIDAV +V   VDGR EVDVKRY RVEK+PGGE++ C VLDGVMFNKDVTH++MRRRIE+PR+LLLDCPLEYKKGE
Sbjct:    5 PVMVLPINTKRETGRTAQLGNISAAKAVSEIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAAAEPLLLQHLHPTQIVRGYAHALQVALETCTAVSKVVDLKDRAALKELVEAAVGTKFSHRWGDILVGMAIDAVTKVVCDVDGRTEVDVKRYVRVEKVPGGELDQCRVLDGVMFNKDVTHARMRRRIESPRILLLDCPLEYKKGE 250

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: A0A7S3GWY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWY3_9STRA)

HSP 1 Score: 387 bits (995), Expect = 2.020e-134
Identity = 190/249 (76.31%), Postives = 219/249 (87.95%), Query Frame = 0

Query:    1 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            M+APVMVL  NTKRE+GR AQL NI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL+GE+LA+AEP+L R  HPT IV G+ RALQTALD C+ ++ TIDV+N  +++++V +A+GTKFS RWGD++V +AI AVK+V T      EVDVKRY R+EKIPGGE+ +C VLDGVMFNKDVTH+KMRRRIENPR+LLLDCPLEYKKGE
Sbjct:    1 MNAPVMVLNANTKRESGRTAQLNNIQAAKAVADIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILSGEILAIAEPLLERNFHPTVIVRGFLRALQTALDTCNKISRTIDVNNTAEMREIVTSAIGTKFSSRWGDQMVDIAIKAVKKVVTKRGDYTEVDVKRYVRIEKIPGGELSECQVLDGVMFNKDVTHAKMRRRIENPRILLLDCPLEYKKGE 249

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: A0A6S9KVF4_HETAK (T-complex protein 1 subunit gamma n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KVF4_HETAK)

HSP 1 Score: 374 bits (960), Expect = 4.270e-125
Identity = 187/249 (75.10%), Postives = 209/249 (83.94%), Query Frame = 0

Query:    1 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            M APVMVL  NT+RE GR+AQL NI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILRE+DV HPAAKSMIELSRAQDEEVGDGTTSVIIL GEMLA+AEP L++ +HPT IV GY RA+  ALD C  +A  +DV++  Q+ +LV+A +GTKFS RW  KLV MAIDAV +V    DGR EVD+KRY RVEKIPGGEM DC VLDGVMFNKD+TH KMR+ IENPRV+LLDC LEYKKGE
Sbjct:    1 MQAPVMVLNTNTQREHGRSAQLSNIQAAKAVADIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREIDVTHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLALAEPFLSQDIHPTVIVQGYMRAMTLALDVCKEIAMDVDVNDRAQMTQLVEATLGTKFSSRWSSKLVGMAIDAVLKVVKDDDGRKEVDIKRYCRVEKIPGGEMGDCRVLDGVMFNKDITHPKMRKSIENPRVMLLDCSLEYKKGE 249

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: A0A7S2V850_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V850_9STRA)

HSP 1 Score: 362 bits (930), Expect = 2.880e-124
Identity = 183/251 (72.91%), Postives = 214/251 (85.26%), Query Frame = 0

Query:    1 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAV-KRVRTVVDGRV-EVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            M APVMVL  NT+RETGR+AQ+ NISAAKAVADIIR+TLGPRSMLKMLLDPMGGIV+TNDGNCILREVDV HPAAKSMIELSRAQDEEVGDGTTSVIIL GE+LA++EP+L R +HPT IV G   ALQ  ++ C+ +A  ++V++  ++  LV+AAVGTKFS RW  K+V MA++AV K V+   DGR  EVD+KRYA+VEK+PGGE++DC VL GVMFNKDVTH KMRRRIENPR+LLLDCPLEYKKGE
Sbjct:    1 MQAPVMVLNANTQRETGRSAQISNISAAKAVADIIRSTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVTHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLALSEPLLNRNLHPTVIVRGLNLALQRCMEICNEIAREVNVEDTEEMFDLVNAAVGTKFSARWNKKMVGMALEAVLKIVKDPGDGRPKEVDIKRYAKVEKVPGGEVDDCKVLAGVMFNKDVTHPKMRRRIENPRILLLDCPLEYKKGE 251

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: W7TWK9_9STRA (T-complex protein 1 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWK9_9STRA)

HSP 1 Score: 370 bits (950), Expect = 1.710e-123
Identity = 189/256 (73.83%), Postives = 213/256 (83.20%), Query Frame = 0

Query:    1 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGR-------VEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            M+APVMVL  NTKRETGR AQLGNI+AAKAV+DI+RTTLGPR+MLKMLLDPMGGIVITNDG+CILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEMLA AEP L R +HPTQIV GY++ALQ AL  C+ALA+ IDV++   L ++V A VGTKFS RWG  +V +A+D+V +V   V G         E DVKRY RVEKIPGGE+ D  V+DGVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGE
Sbjct:    2 MNAPVMVLNANTKRETGRTAQLGNIAAAKAVSDIVRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAQAEPFLHRNIHPTQIVAGYSKALQEALKVCNALAKPIDVNDKQALSQIVSACVGTKFSSRWGPFMVDLAVDSVLKVVRQVGGEGGAEGGYKECDVKRYVRVEKIPGGELGDSKVIDGVMFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGE 257

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: A0A7S2FP00_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FP00_9STRA)

HSP 1 Score: 370 bits (950), Expect = 3.630e-123
Identity = 183/250 (73.20%), Postives = 214/250 (85.60%), Query Frame = 0

Query:    1 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRV-RTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            M APVMVL  NTKRETGR AQLGNI AAKAV+DIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL+GE+L +AEP L R +HPT IV GY +ALQ AL  C  +A  +D+D+  Q+  +V + +GTKFS R+GD++V++A+ AV++V +   DG+ EVD+KRY + EKIPGGE+ DC VL+GVMFNKDVTH+KMRRRIENPRVLLLDCPLEYKKGE
Sbjct:   30 MQAPVMVLNTNTKRETGRTAQLGNIMAAKAVSDIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILSGEILCLAEPFLMRNIHPTVIVSGYNKALQEALVVCKQMAVPVDLDDTKQMTDIVRSTIGTKFSSRFGDQMVNLALTAVRKVVKEGADGKKEVDIKRYVKTEKIPGGELSDCCVLNGVMFNKDVTHAKMRRRIENPRVLLLDCPLEYKKGE 279

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: A0A7S2SP58_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP58_9STRA)

HSP 1 Score: 368 bits (944), Expect = 1.220e-122
Identity = 181/251 (72.11%), Postives = 212/251 (84.46%), Query Frame = 0

Query:    1 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRV--RTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            M APVMVL   TKRETGR+AQLGNI+AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVI+LTGE L +AEP + R VHPT IV G+TRALQ +L+ C  +A  +D+++  Q+  +V +++GTKFS RWG +++ MA+ AV RV       G+ EVD+KRY + EK+PGGE+ DC VLDGVMFNKDVTH+KMRRRIENPR+LLLDCPLEYKKGE
Sbjct:    1 MQAPVMVLNTTTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIVLTGETLLLAEPFIVRNVHPTVIVSGFTRALQHSLEVCKRVAVKVDLEDRAQMMSIVQSSIGTKFSARWGAQMIDMALTAVLRVVHEDGGSGQKEVDIKRYVKTEKLPGGELSDCQVLDGVMFNKDVTHAKMRRRIENPRILLLDCPLEYKKGE 251

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: A0A7R9U7E4_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7E4_9STRA)

HSP 1 Score: 366 bits (940), Expect = 1.110e-121
Identity = 180/249 (72.29%), Postives = 213/249 (85.54%), Query Frame = 0

Query:    1 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            M  P+MV+ VNT+RETGRAAQLGNI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDG+ ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML++AEP L R +HPT +V GYTRALQ AL+ C  +A+ +D+++   +++LV  AVGT FS R+G+ ++ +A+DAV+RV T    R EVD+KRYA+VEKIPGGE+ DC VL+GVMFNK  TH+KMRRRIENPR+LL DCPLEYKKGE
Sbjct:   29 MQTPMMVMNVNTQRETGRAAQLGNIQAAKAVADIIRTTLGPRSMLKMLLDPMGGIVLTNDGHAILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLSMAEPFLERNIHPTLVVKGYTRALQVALNTCKEIAKHVDIEDTASIQELVKTAVGTTFSSRFGNIVIGLAVDAVRRVVTYSGDRPEVDIKRYAKVEKIPGGEIADCAVLNGVMFNKVPTHAKMRRRIENPRILLFDCPLEYKKGE 277

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BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Match: A0A2P4Y219_9STRA (T-complex protein 1 subunit gamma (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y219_9STRA)

HSP 1 Score: 353 bits (906), Expect = 1.750e-119
Identity = 179/240 (74.58%), Postives = 202/240 (84.17%), Query Frame = 0

Query:   11 NTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRV-RTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 249
            NTKRETGR AQLGNI AAKAV+DI+RTTLGPRSMLKMLLDPMGGIV+TNDGN ILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIIL GE+L VAEP L+  VHPT I+ G+ RAL  +++    LA TID++N   ++ LV +++GTKFS R G+ +  +A+DAV  V RT   GR EVDVKRYA+VEKIPGGE+ED  VL GVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE
Sbjct:   85 NTKRETGRTAQLGNIEAAKAVSDIVRTTLGPRSMLKMLLDPMGGIVMTNDGNAILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLVVAEPFLSHQVHPTVIIRGFNRALNASIEIAKNLARTIDIENKEDMRNLVQSSIGTKFSPRVGNLVSDLALDAVLTVVRTTASGRKEVDVKRYAKVEKIPGGELEDSRVLKGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE 324

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig13170.2572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LU47_ECTSI	3.800e-169	98.80	T-complex protein 1 subunit gamma n=1 Tax=Ectocarp...	[more]
A0A836CR16_9STRA	1.560e-134	79.67	T-complex protein 1 subunit gamma n=1 Tax=Tribonem...	[more]
A0A7S3GWY3_9STRA	2.020e-134	76.31	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A6S9KVF4_HETAK	4.270e-125	75.10	T-complex protein 1 subunit gamma n=1 Tax=Heterosi...	[more]
A0A7S2V850_9STRA	2.880e-124	72.91	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
W7TWK9_9STRA	1.710e-123	73.83	T-complex protein 1 subunit gamma n=2 Tax=Monodops...	[more]
A0A7S2FP00_9STRA	3.630e-123	73.20	T-complex protein 1 subunit gamma n=1 Tax=Florenci...	[more]
A0A7S2SP58_9STRA	1.220e-122	72.11	T-complex protein 1 subunit gamma n=1 Tax=Rhizochr...	[more]
A0A7R9U7E4_9STRA	1.110e-121	72.29	T-complex protein 1 subunit gamma n=1 Tax=Pinguioc...	[more]
A0A2P4Y219_9STRA	1.750e-119	74.58	T-complex protein 1 subunit gamma (Fragment) n=1 T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 55..73 score: 39.14 coord: 85..104 score: 45.3 coord: 33..49 score: 38.72
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 24..141 e-value: 4.9E-80 score: 271.6
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 11..142
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10		coord: 214..249 e-value: 4.9E-80 score: 271.6
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 209..249
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 142..213 e-value: 4.9E-80 score: 271.6
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 148..216
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 31..248 e-value: 4.3E-70 score: 236.7
None	No IPR available	PANTHER	PTHR11353	CHAPERONIN	coord: 4..249
None	No IPR available	PANTHER	PTHR11353:SF24	T-COMPLEX PROTEIN 1 SUBUNIT GAMMA	coord: 4..249
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 36..48
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 85..93
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 57..73

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig13170	contig	Ecto-sp13_S_contig13170:613..4664 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig13170.2572.1	mRNA_Ecto-sp13_S_contig13170.2572.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig13170 613..4664 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig13170.2572.1 ID=prot_Ecto-sp13_S_contig13170.2572.1|Name=mRNA_Ecto-sp13_S_contig13170.2572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=249bp
MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLD
PMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILT
GEMLAVAEPILTRGVHPTQIVMGYTRALQTALDACDALAETIDVDNGPQL
KKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVE
KIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR027413	GROEL-like_equatorial_sf
IPR027409	GroEL-like_apical_dom_sf
IPR027410	TCP-1-like_intermed_sf
IPR002423	Cpn60/TCP-1
IPR002194	Chaperonin_TCP-1_CS