mRNA_Ecto-sp13_S_contig13168.2568.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: D7FWR0_ECTSI (Phosphoglycerate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR0_ECTSI) HSP 1 Score: 1022 bits (2642), Expect = 0.000e+0 Identity = 607/706 (85.98%), Postives = 618/706 (87.54%), Query Frame = 1
Query: 1 GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGARKEVVAAARRAAVLEGPDGLLSGRDAVARRGDGTGGSRGGASREDSRGPISPSXXXXXXXXLLSRLGALKWEDVEGRRILLHVDLSKGATPEDGTYGGSLGAGGGDGTGHDGTGGGAGQQEFPEQVRLVAEQVREVLSAKPAAVAIVSEMAPPALAAAVXXXTATLKMNNSEDVDKQENSSQSQPLAGPDTQQQEQQPSAQHPPAGDPTAAQTWSSSAESGSLRASAAAVSSLLGMEVDFYDTVPDLAAALERCAAAGGREGGGLPGTGGGDDVGAGSGGLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDCEEERLPDFSWESEEAEAAAEHAKEIEAARLKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATVTGWKEDGAVDASGISGNNTQSMGTAEVQEEAAAAEAKKRAKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSGDAGPDNDXXXXXXXXXXXDSTAGSAAPGGEGAGADGVTGAAALDVEPEDPAMGFEYEGETMDVLLEDGIPKGFHPMDVGPQTTAAFRVSV 2118
GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGAR+EVVAAARRAAVLEGPDGLLSGRDA AR GDGTGGSR DSRGP SPSXXXXXX LSRLGALKWEDVEGRRILLHVDLSKG TPEDGTYGGSLG GGGDG GHDGT GG GQQEFP+QVRLVAEQVREVLSAKPAAVAIVSEMAPPALA AVXXX SQPLAGP+TQQQEQQPSAQHPPAGDPTAAQT SSS ESGSLRASAAAVSSLLGMEVDFYDTVP+LAAALERCAAAGGR GGGLPG GDDVGAGS GLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSD EEERLPDFSWE EEAEAAAEHAKEIEAARLK QGP EGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLA++GGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAAT +GWKE+GAVDASG SGNNTQS A +A+KR KARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQ LSGDAGPDND XXXXXXXXX DGVT AALDVEPED AMGFEYEGETMDV LEDGIPKGFHPMDVGPQTTAAFR +V
Sbjct: 1284 GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGARREVVAAARRAAVLEGPDGLLSGRDAAARSGDGTGGSRXXXXXXDSRGPRSPSXXXXXXP--LSRLGALKWEDVEGRRILLHVDLSKGVTPEDGTYGGSLGGGGGDGIGHDGTDGGTGQQEFPKQVRLVAEQVREVLSAKPAAVAIVSEMAPPALATAVXXXXXXXXXXXXXXXXXXXXXXXSQPLAGPETQQQEQQPSAQHPPAGDPTAAQTLSSSPESGSLRASAAAVSSLLGMEVDFYDTVPELAAALERCAAAGGRGGGGLPGAXXGDDVGAGSDGLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDGEEERLPDFSWEGEEAEAAAEHAKEIEAARLKVQGPGEGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAVVGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATASGWKEEGAVDASGSSGNNTQSXXXXXXXXXXA--DARKRPKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQFLSGDAGPDNDDEXXXXXXXXXXXXXXXXXXXXXXXXXDGVTDVAALDVEPEDAAMGFEYEGETMDVSLEDGIPKGFHPMDVGPQTTAAFRDAV 1985
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A6H5JFB2_9PHAE (Phosphoglycerate kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFB2_9PHAE) HSP 1 Score: 944 bits (2439), Expect = 0.000e+0 Identity = 585/787 (74.33%), Postives = 592/787 (75.22%), Query Frame = 1
Query: 1 GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGARKEVVAAARRAAVLEGPDGLLSGRDAVARRGDGTGGSRGGASREDSRGPISPSXXXXXXXXLLSRLGALKWEDVEGRRILLHVDLSKGATPEDGTYGGSLGAGGGDGTGHDGTGGGAGQQEFPEQVRLVAEQVREVLSAKPAAVAIVSEMAPPALAAAVXXXTATLKMNNSEDVDKQENSSQSQPLAGPDTQQQEQQPSAQHPPAGDPTAAQTWSSSAESGSLRASAAAVSSLLGMEVDFYDTVPDLAAALERCAAAGGREGG-GLPGTGGGDDVGAGSGGLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDCEEERLPDFSWESEEAEAAAEHAKEIEAARLKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSG-------VHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATVTGWKEDGAVDASGISGNNTQS--------------------------------------------------------------------------------------------------------MGTAEVQEEAAAAEAKKRAKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSGDAGPDNDXXXXXXXXXXXDSTAGSAAPGGEGAGADGVTGAAALDVEPEDPAMGFEYEGE 2025
GPQARAAAAAKAGN KASFLALAYGEVSSRVAAAAESFE SLSEGEGAR+EVV AARRAAVLEGPDGLLSGRDA RRGDG GGSRGGA DSRGP SPSXXXXXX LSRLGALKWEDV GRRILLHVDLSKGATPEDGTYGGSLG GGGDG GHDGTGG GQQEFP+QVR+VAEQVREVLSAKPAAVAIVSEMAPPALA AV TATL + NSEDVD QENSSQSQPLA P T QQEQQ SAQHPPAGDP AAQT SS E GSLRASAAAVSSLLGMEV FYDTVPDLAAALERCAAAG GLPG DDVGAGSG LPPFGMVPLMMAERLSLPGVVPAPPVDEPELSD EEERLPDFSWE EEAEAAAEHAKEIEAARLK QGP EGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSG VHGDITAMAYLTEASDRPLLAI+GGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAAT TGWK +GAVDASG SGNNTQS MGTA Q ARKNRWTGKGTAGKPRDPLDVVEAAR+LLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSG AGPD D DSTAGS APGGEGAGADGV AAALDVEPEDPAMGFEYEGE
Sbjct: 512 GPQARAAAAAKAGNRKASFLALAYGEVSSRVAAAAESFEASLSEGEGARREVVVAARRAAVLEGPDGLLSGRDAAVRRGDGNGGSRGGAXXXDSRGPRSPSXXXXXXP--LSRLGALKWEDVGGRRILLHVDLSKGATPEDGTYGGSLGVGGGDGIGHDGTGGRTGQQEFPKQVRMVAEQVREVLSAKPAAVAIVSEMAPPALATAVAPATATLNIKNSEDVDTQENSSQSQPLAEPGT-QQEQQLSAQHPPAGDPAAAQTVPSSPECGSLRASAAAVSSLLGMEVAFYDTVPDLAAALERCAAAGXXXXXXGLPGAXXXDDVGAGSGDLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDGEEERLPDFSWEGEEAEAAAEHAKEIEAARLKVQGPGEGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGKKTTDGGVHGDITAMAYLTEASDRPLLAIVGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATATGWKGEGAVDASGSSGNNTQSVGGEVNIFSGETKGDRGCKKRSLWASKIRVVWVPLWGVFSCERCKRPQYDFEKANRLILHNAFSPNLFESGVQNQELCFGVTHEQSKHHPLEQHCFSGDTCGSSMGTAGAQAXXXXXXXXXXXXARKNRWTGKGTAGKPRDPLDVVEAARKLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSGAAGPDKDDEENDKNDNGNDSTAGSVAPGGEGAGADGVMDAAALDVEPEDPAMGFEYEGE 1295
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A7S2BBV4_9STRA (Phosphoglycerate kinase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BBV4_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 5.500e-16 Identity = 114/434 (26.27%), Postives = 169/434 (38.94%), Query Frame = 1
Query: 808 SLRASAAAVSSLLGMEVDFYDTVPDLAAALERCAAAGGREGGGLPGTGGGDDVGAGSGGLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDCEEERLPDFSWESEEAEAAAEHAKEIEAARLKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATVTGWKEDGAVDASGISGNNTQSMGTAEVQEEAAAAEAKKRAKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSGDAGPDNDXXXXXXXXXXXDSTAGSAAPGGEGAGADGVTGAAALDVEPEDPAMGFEYEGETMDVLLEDGIPKGFHPMDVGPQTTAAFR 2109
S+++ A +SSL+G VDF DT+ + ++ A PGT +++ E L + P P + LSD EEERLP E + + P+ D+G LA VD+ V D+ +A + +R L P+T + +AG +H ++ + + L P+LAI+GG SLE +KLID LLD VD + G ++ F+AA G T +P ++ AR+LL KA + GV V+LP DFV+G V+ G V+ DA P A G E D A GF+Y+GETM+ L +G+ K H MD+G +T + R
Sbjct: 833 SIKSLAPMLSSLIGAPVDFCDTLGAIGTMVDAAA----------PGT--------------------VILLEHLDADCLAPFPQPEPEVLSDDEEERLPYLG------------EPEDDPRLVPPPPPQRPDVGVELAPFVDLFVCDSAKACLDRKRGLVALAEPST-VRMAGPTLHKELVSTSVLLTRPKGPVLAIVGGESLEADVKLIDRLLDSVDEIVFAGAVSLAFLAA-------------------------------------------------------LGHETGATVIEPA-LIPMARKLLSKAHQLGVNVMLPVDFVMGSQLVNAAG-----VVLTDAAP---------------------ADGEEDXXXXXXXXXXXXXXXEVDLAAGFDYDGETMECTLSEGLMKSMHAMDLGTKTLSLVR 1141
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A7S2VWK6_9STRA (Phosphoglycerate kinase (Fragment) n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWK6_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.250e-12 Identity = 76/271 (28.04%), Postives = 120/271 (44.28%), Query Frame = 1
Query: 1009 LMMAERLSLPGVVPAPPVDEPELSDCEEERLPDFSWESEEAEAAAEHAKEIEAARLKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATVTGWKEDGAVDASGISGNNTQSMGTAEVQEEAAAAEAKKRAKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENG 1821
+ + E+L+ G+VPA P E +S +E+ L D +E EE E +G +L G +DV V D P+++ L VP GL V G + ++ ++ Y+ E ++ ++AI+GGGSL ++K+ID LLD+VD +AI G A T +AA +G A GK R ++ + A +L+ KA++ GV++ILP D GDI VD++G
Sbjct: 400 IHLLEKLNGQGLVPAVPEKEVIISGDDEDEL-DVGFEEEEEVVVQE------------------TVGSMLNGAIDVVVCDDPKSMVNGTDCLS-DLVPNDGLRVMGKKLRAEMASVGYMLERAEGSVVAIVGGGSLGAKVKMIDYLLDVVDKIAITGKPAMTMLAA-----------------------------LGRA---------------------------MGKTRVETNLFDVAIKLMNKAKRNGVDLILPVDLTCGDILVDKDG 594
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A3P1ZZ17_9DELT (Phosphoglycerate kinase n=1 Tax=Desulfovibrio sp. OH1186_COT-070 TaxID=2491045 RepID=A0A3P1ZZ17_9DELT) HSP 1 Score: 65.1 bits (157), Expect = 1.960e-7 Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 1174 LKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
LK + + DL LA + +V VMDA A + G V L AG + ++ A A + + RPL AI+GG + +L L++ LL+ VD L +GGG+A TF+AA+
Sbjct: 114 LKGEKKNDPDLAARLAALGEVYVMDAFGAAHRAHASTE-GAVRAAALACAGPLLQAELDAFAKVLDNPARPLAAIIGGSKVSTKLALLENLLEKVDMLIVGGGIANTFLAAA 224
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A7Y2TTX2_9GAMM (Phosphoglycerate kinase n=3 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2TTX2_9GAMM) HSP 1 Score: 64.7 bits (156), Expect = 2.630e-7 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 1186 GPREGD--LGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
G ++ D L +A + DV VMDA + + G + AG + G++ A+ E +RPLLAI+GG + +L ++D LLD VD L +GGG+A TF+AAS
Sbjct: 117 GEKKNDEQLARAMAALCDVFVMDAFGTAHRAQASTE-GVTRFAPVACAGPLLSGELDALEKALEHPERPLLAIVGGSKVSTKLTVLDSLLDKVDELIVGGGIANTFIAAS 225
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A2E2TW43_9GAMM (Phosphoglycerate kinase n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2TW43_9GAMM) HSP 1 Score: 63.9 bits (154), Expect = 4.590e-7 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 1
Query: 1183 QGPREGD--LGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAA 1506
+G + D L LAG+ DV VMDA A + +G AG + ++ A+ + EA RPL+AI+GG + +L ++ LLD VD L +GGG+A TF+AA
Sbjct: 115 KGEKNNDETLARQLAGLCDVFVMDAFGAAHRAHAST-YGVAEYAPQVCAGLLLEKEVNALTQVLEAPKRPLVAIIGGAKVSSKLAVLGSLLDTVDYLIVGGGMANTFLAA 223
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A1G7MKF3_9DELT (Phosphoglycerate kinase n=2 Tax=Desulfovibrio legallii TaxID=571438 RepID=A0A1G7MKF3_9DELT) HSP 1 Score: 63.5 bits (153), Expect = 6.090e-7 Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 1174 LKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
LK + + DL LAG+ +V VMDA A + G V AG + ++ A + + RPL+AI+GG + +L L++ LL+ VD L +GGG+A TF+AA+
Sbjct: 114 LKGEKKNDPDLAARLAGLGEVYVMDAFGAAHRAHASTE-GAVRAAKKACAGPLLQAELEAFGKVLDNPARPLVAIIGGSKVSSKLGLLENLLNTVDVLMVGGGIANTFLAAA 224
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A231P3G7_9DELT (Phosphoglycerate kinase n=4 Tax=Desulfovibrio TaxID=872 RepID=A0A231P3G7_9DELT) HSP 1 Score: 62.8 bits (151), Expect = 1.070e-6 Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 1174 LKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
L + + L E LAG+ DV VMDA A + G V + AG + ++ A + + RPL+AI+GG + ++ L++ LL+ VD L +GGG+A TF+AA+
Sbjct: 114 LAGEKKNDPQLAEKLAGLGDVYVMDAFGAAHRAHASTE-GAVRAAKVACAGPLLQAELKAFEKVLDNPARPLVAIIGGAKVSTKIGLLENLLNTVDVLIVGGGIANTFLAAA 224
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A2V2G179_9DELT (Phosphoglycerate kinase n=1 Tax=Desulfovibrionaceae bacterium TaxID=2049043 RepID=A0A2V2G179_9DELT) HSP 1 Score: 62.8 bits (151), Expect = 1.090e-6 Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 1174 LKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
LK + + L LA + DV VMDA A + G V G+ VAG + ++ A L + RPL AI+GG + +L +++ LL+ VD L +GGG+A TF+AA+
Sbjct: 115 LKGEKKNDETLAAKLAALGDVYVMDAFGAAHRAHASTE-GAVRKAGVAVAGPLMLAEMEAAEKLLDRPARPLCAIIGGSKVSTKLTVLENLLNKVDCLIVGGGIANTFLAAA 225 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13168.2568.1 >prot_Ecto-sp13_S_contig13168.2568.1 ID=prot_Ecto-sp13_S_contig13168.2568.1|Name=mRNA_Ecto-sp13_S_contig13168.2568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=712bp GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGARKback to top mRNA from alignment at Ecto-sp13_S_contig13168:2..4686+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13168.2568.1 ID=mRNA_Ecto-sp13_S_contig13168.2568.1|Name=mRNA_Ecto-sp13_S_contig13168.2568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4685bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13168:2..4686+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13168:2..4686+ >mRNA_Ecto-sp13_S_contig13168.2568.1 ID=mRNA_Ecto-sp13_S_contig13168.2568.1|Name=mRNA_Ecto-sp13_S_contig13168.2568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2136bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13168:2..4686+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |