mRNA_Ecto-sp13_S_contig13168.2568.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13168.2568.1
Unique NamemRNA_Ecto-sp13_S_contig13168.2568.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: D7FWR0_ECTSI (Phosphoglycerate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR0_ECTSI)

HSP 1 Score: 1022 bits (2642), Expect = 0.000e+0
Identity = 607/706 (85.98%), Postives = 618/706 (87.54%), Query Frame = 1
Query:    1 GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGARKEVVAAARRAAVLEGPDGLLSGRDAVARRGDGTGGSRGGASREDSRGPISPSXXXXXXXXLLSRLGALKWEDVEGRRILLHVDLSKGATPEDGTYGGSLGAGGGDGTGHDGTGGGAGQQEFPEQVRLVAEQVREVLSAKPAAVAIVSEMAPPALAAAVXXXTATLKMNNSEDVDKQENSSQSQPLAGPDTQQQEQQPSAQHPPAGDPTAAQTWSSSAESGSLRASAAAVSSLLGMEVDFYDTVPDLAAALERCAAAGGREGGGLPGTGGGDDVGAGSGGLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDCEEERLPDFSWESEEAEAAAEHAKEIEAARLKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATVTGWKEDGAVDASGISGNNTQSMGTAEVQEEAAAAEAKKRAKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSGDAGPDNDXXXXXXXXXXXDSTAGSAAPGGEGAGADGVTGAAALDVEPEDPAMGFEYEGETMDVLLEDGIPKGFHPMDVGPQTTAAFRVSV 2118
            GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGAR+EVVAAARRAAVLEGPDGLLSGRDA AR GDGTGGSR      DSRGP SPSXXXXXX   LSRLGALKWEDVEGRRILLHVDLSKG TPEDGTYGGSLG GGGDG GHDGT GG GQQEFP+QVRLVAEQVREVLSAKPAAVAIVSEMAPPALA AVXXX                    SQPLAGP+TQQQEQQPSAQHPPAGDPTAAQT SSS ESGSLRASAAAVSSLLGMEVDFYDTVP+LAAALERCAAAGGR GGGLPG   GDDVGAGS GLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSD EEERLPDFSWE EEAEAAAEHAKEIEAARLK QGP EGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLA++GGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAAT +GWKE+GAVDASG SGNNTQS          A  +A+KR KARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQ LSGDAGPDND  XXXXXXXXX                DGVT  AALDVEPED AMGFEYEGETMDV LEDGIPKGFHPMDVGPQTTAAFR +V
Sbjct: 1284 GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGARREVVAAARRAAVLEGPDGLLSGRDAAARSGDGTGGSRXXXXXXDSRGPRSPSXXXXXXP--LSRLGALKWEDVEGRRILLHVDLSKGVTPEDGTYGGSLGGGGGDGIGHDGTDGGTGQQEFPKQVRLVAEQVREVLSAKPAAVAIVSEMAPPALATAVXXXXXXXXXXXXXXXXXXXXXXXSQPLAGPETQQQEQQPSAQHPPAGDPTAAQTLSSSPESGSLRASAAAVSSLLGMEVDFYDTVPELAAALERCAAAGGRGGGGLPGAXXGDDVGAGSDGLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDGEEERLPDFSWEGEEAEAAAEHAKEIEAARLKVQGPGEGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAVVGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATASGWKEEGAVDASGSSGNNTQSXXXXXXXXXXA--DARKRPKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQFLSGDAGPDNDDEXXXXXXXXXXXXXXXXXXXXXXXXXDGVTDVAALDVEPEDAAMGFEYEGETMDVSLEDGIPKGFHPMDVGPQTTAAFRDAV 1985          
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A6H5JFB2_9PHAE (Phosphoglycerate kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFB2_9PHAE)

HSP 1 Score: 944 bits (2439), Expect = 0.000e+0
Identity = 585/787 (74.33%), Postives = 592/787 (75.22%), Query Frame = 1
Query:    1 GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGARKEVVAAARRAAVLEGPDGLLSGRDAVARRGDGTGGSRGGASREDSRGPISPSXXXXXXXXLLSRLGALKWEDVEGRRILLHVDLSKGATPEDGTYGGSLGAGGGDGTGHDGTGGGAGQQEFPEQVRLVAEQVREVLSAKPAAVAIVSEMAPPALAAAVXXXTATLKMNNSEDVDKQENSSQSQPLAGPDTQQQEQQPSAQHPPAGDPTAAQTWSSSAESGSLRASAAAVSSLLGMEVDFYDTVPDLAAALERCAAAGGREGG-GLPGTGGGDDVGAGSGGLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDCEEERLPDFSWESEEAEAAAEHAKEIEAARLKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSG-------VHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATVTGWKEDGAVDASGISGNNTQS--------------------------------------------------------------------------------------------------------MGTAEVQEEAAAAEAKKRAKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSGDAGPDNDXXXXXXXXXXXDSTAGSAAPGGEGAGADGVTGAAALDVEPEDPAMGFEYEGE 2025
            GPQARAAAAAKAGN KASFLALAYGEVSSRVAAAAESFE SLSEGEGAR+EVV AARRAAVLEGPDGLLSGRDA  RRGDG GGSRGGA   DSRGP SPSXXXXXX   LSRLGALKWEDV GRRILLHVDLSKGATPEDGTYGGSLG GGGDG GHDGTGG  GQQEFP+QVR+VAEQVREVLSAKPAAVAIVSEMAPPALA AV   TATL + NSEDVD QENSSQSQPLA P T QQEQQ SAQHPPAGDP AAQT  SS E GSLRASAAAVSSLLGMEV FYDTVPDLAAALERCAAAG      GLPG    DDVGAGSG LPPFGMVPLMMAERLSLPGVVPAPPVDEPELSD EEERLPDFSWE EEAEAAAEHAKEIEAARLK QGP EGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSG       VHGDITAMAYLTEASDRPLLAI+GGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAAT TGWK +GAVDASG SGNNTQS                                                                                                        MGTA  Q             ARKNRWTGKGTAGKPRDPLDVVEAAR+LLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSG AGPD D           DSTAGS APGGEGAGADGV  AAALDVEPEDPAMGFEYEGE
Sbjct:  512 GPQARAAAAAKAGNRKASFLALAYGEVSSRVAAAAESFEASLSEGEGARREVVVAARRAAVLEGPDGLLSGRDAAVRRGDGNGGSRGGAXXXDSRGPRSPSXXXXXXP--LSRLGALKWEDVGGRRILLHVDLSKGATPEDGTYGGSLGVGGGDGIGHDGTGGRTGQQEFPKQVRMVAEQVREVLSAKPAAVAIVSEMAPPALATAVAPATATLNIKNSEDVDTQENSSQSQPLAEPGT-QQEQQLSAQHPPAGDPAAAQTVPSSPECGSLRASAAAVSSLLGMEVAFYDTVPDLAAALERCAAAGXXXXXXGLPGAXXXDDVGAGSGDLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDGEEERLPDFSWEGEEAEAAAEHAKEIEAARLKVQGPGEGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGKKTTDGGVHGDITAMAYLTEASDRPLLAIVGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATATGWKGEGAVDASGSSGNNTQSVGGEVNIFSGETKGDRGCKKRSLWASKIRVVWVPLWGVFSCERCKRPQYDFEKANRLILHNAFSPNLFESGVQNQELCFGVTHEQSKHHPLEQHCFSGDTCGSSMGTAGAQAXXXXXXXXXXXXARKNRWTGKGTAGKPRDPLDVVEAARKLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSGAAGPDKDDEENDKNDNGNDSTAGSVAPGGEGAGADGVMDAAALDVEPEDPAMGFEYEGE 1295          
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A7S2BBV4_9STRA (Phosphoglycerate kinase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BBV4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.500e-16
Identity = 114/434 (26.27%), Postives = 169/434 (38.94%), Query Frame = 1
Query:  808 SLRASAAAVSSLLGMEVDFYDTVPDLAAALERCAAAGGREGGGLPGTGGGDDVGAGSGGLPPFGMVPLMMAERLSLPGVVPAPPVDEPELSDCEEERLPDFSWESEEAEAAAEHAKEIEAARLKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATVTGWKEDGAVDASGISGNNTQSMGTAEVQEEAAAAEAKKRAKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENGPLPGQVLSGDAGPDNDXXXXXXXXXXXDSTAGSAAPGGEGAGADGVTGAAALDVEPEDPAMGFEYEGETMDVLLEDGIPKGFHPMDVGPQTTAAFR 2109
            S+++ A  +SSL+G  VDF DT+  +   ++  A          PGT                    +++ E L    + P P  +   LSD EEERLP                 E +   +    P+  D+G  LA  VD+ V D+ +A  + +R L     P+T + +AG  +H ++ + + L      P+LAI+GG SLE  +KLID LLD VD +   G ++  F+AA                                                        G  T     +P  ++  AR+LL KA + GV V+LP DFV+G   V+  G     V+  DA P                     A G E                  D A GF+Y+GETM+  L +G+ K  H MD+G +T +  R
Sbjct:  833 SIKSLAPMLSSLIGAPVDFCDTLGAIGTMVDAAA----------PGT--------------------VILLEHLDADCLAPFPQPEPEVLSDDEEERLPYLG------------EPEDDPRLVPPPPPQRPDVGVELAPFVDLFVCDSAKACLDRKRGLVALAEPST-VRMAGPTLHKELVSTSVLLTRPKGPVLAIVGGESLEADVKLIDRLLDSVDEIVFAGAVSLAFLAA-------------------------------------------------------LGHETGATVIEPA-LIPMARKLLSKAHQLGVNVMLPVDFVMGSQLVNAAG-----VVLTDAAP---------------------ADGEEDXXXXXXXXXXXXXXXEVDLAAGFDYDGETMECTLSEGLMKSMHAMDLGTKTLSLVR 1141          
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A7S2VWK6_9STRA (Phosphoglycerate kinase (Fragment) n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWK6_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.250e-12
Identity = 76/271 (28.04%), Postives = 120/271 (44.28%), Query Frame = 1
Query: 1009 LMMAERLSLPGVVPAPPVDEPELSDCEEERLPDFSWESEEAEAAAEHAKEIEAARLKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAASSTEAATVTGWKEDGAVDASGISGNNTQSMGTAEVQEEAAAAEAKKRAKARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGDIEVDENG 1821
            + + E+L+  G+VPA P  E  +S  +E+ L D  +E EE     E                   +G +L G +DV V D P+++      L    VP  GL V G  +  ++ ++ Y+ E ++  ++AI+GGGSL  ++K+ID LLD+VD +AI G  A T +AA                             +G A                            GK R   ++ + A +L+ KA++ GV++ILP D   GDI VD++G
Sbjct:  400 IHLLEKLNGQGLVPAVPEKEVIISGDDEDEL-DVGFEEEEEVVVQE------------------TVGSMLNGAIDVVVCDDPKSMVNGTDCLS-DLVPNDGLRVMGKKLRAEMASVGYMLERAEGSVVAIVGGGSLGAKVKMIDYLLDVVDKIAITGKPAMTMLAA-----------------------------LGRA---------------------------MGKTRVETNLFDVAIKLMNKAKRNGVDLILPVDLTCGDILVDKDG 594          
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A3P1ZZ17_9DELT (Phosphoglycerate kinase n=1 Tax=Desulfovibrio sp. OH1186_COT-070 TaxID=2491045 RepID=A0A3P1ZZ17_9DELT)

HSP 1 Score: 65.1 bits (157), Expect = 1.960e-7
Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 1174 LKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
            LK +   + DL   LA + +V VMDA  A +        G V    L  AG  +  ++ A A + +   RPL AI+GG  +  +L L++ LL+ VD L +GGG+A TF+AA+
Sbjct:  114 LKGEKKNDPDLAARLAALGEVYVMDAFGAAHRAHASTE-GAVRAAALACAGPLLQAELDAFAKVLDNPARPLAAIIGGSKVSTKLALLENLLEKVDMLIVGGGIANTFLAAA 224          
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A7Y2TTX2_9GAMM (Phosphoglycerate kinase n=3 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2TTX2_9GAMM)

HSP 1 Score: 64.7 bits (156), Expect = 2.630e-7
Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 1186 GPREGD--LGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
            G ++ D  L   +A + DV VMDA    +  +     G      +  AG  + G++ A+    E  +RPLLAI+GG  +  +L ++D LLD VD L +GGG+A TF+AAS
Sbjct:  117 GEKKNDEQLARAMAALCDVFVMDAFGTAHRAQASTE-GVTRFAPVACAGPLLSGELDALEKALEHPERPLLAIVGGSKVSTKLTVLDSLLDKVDELIVGGGIANTFIAAS 225          
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A2E2TW43_9GAMM (Phosphoglycerate kinase n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2TW43_9GAMM)

HSP 1 Score: 63.9 bits (154), Expect = 4.590e-7
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 1
Query: 1183 QGPREGD--LGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAA 1506
            +G +  D  L   LAG+ DV VMDA  A +       +G         AG  +  ++ A+  + EA  RPL+AI+GG  +  +L ++  LLD VD L +GGG+A TF+AA
Sbjct:  115 KGEKNNDETLARQLAGLCDVFVMDAFGAAHRAHAST-YGVAEYAPQVCAGLLLEKEVNALTQVLEAPKRPLVAIIGGAKVSSKLAVLGSLLDTVDYLIVGGGMANTFLAA 223          
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A1G7MKF3_9DELT (Phosphoglycerate kinase n=2 Tax=Desulfovibrio legallii TaxID=571438 RepID=A0A1G7MKF3_9DELT)

HSP 1 Score: 63.5 bits (153), Expect = 6.090e-7
Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 1174 LKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
            LK +   + DL   LAG+ +V VMDA  A +        G V       AG  +  ++ A   + +   RPL+AI+GG  +  +L L++ LL+ VD L +GGG+A TF+AA+
Sbjct:  114 LKGEKKNDPDLAARLAGLGEVYVMDAFGAAHRAHASTE-GAVRAAKKACAGPLLQAELEAFGKVLDNPARPLVAIIGGSKVSSKLGLLENLLNTVDVLMVGGGIANTFLAAA 224          
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A231P3G7_9DELT (Phosphoglycerate kinase n=4 Tax=Desulfovibrio TaxID=872 RepID=A0A231P3G7_9DELT)

HSP 1 Score: 62.8 bits (151), Expect = 1.070e-6
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 1174 LKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
            L  +   +  L E LAG+ DV VMDA  A +        G V    +  AG  +  ++ A   + +   RPL+AI+GG  +  ++ L++ LL+ VD L +GGG+A TF+AA+
Sbjct:  114 LAGEKKNDPQLAEKLAGLGDVYVMDAFGAAHRAHASTE-GAVRAAKVACAGPLLQAELKAFEKVLDNPARPLVAIIGGAKVSTKIGLLENLLNTVDVLIVGGGIANTFLAAA 224          
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Match: A0A2V2G179_9DELT (Phosphoglycerate kinase n=1 Tax=Desulfovibrionaceae bacterium TaxID=2049043 RepID=A0A2V2G179_9DELT)

HSP 1 Score: 62.8 bits (151), Expect = 1.090e-6
Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 1174 LKAQGPREGDLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDITAMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFVAAS 1509
            LK +   +  L   LA + DV VMDA  A +        G V   G+ VAG  +  ++ A   L +   RPL AI+GG  +  +L +++ LL+ VD L +GGG+A TF+AA+
Sbjct:  115 LKGEKKNDETLAAKLAALGDVYVMDAFGAAHRAHASTE-GAVRKAGVAVAGPLMLAEMEAAEKLLDRPARPLCAIIGGSKVSTKLTVLENLLNKVDCLIVGGGIANTFLAAA 225          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13168.2568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWR0_ECTSI0.000e+085.98Phosphoglycerate kinase n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFB2_9PHAE0.000e+074.33Phosphoglycerate kinase n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2BBV4_9STRA5.500e-1626.27Phosphoglycerate kinase (Fragment) n=1 Tax=Florenc... [more]
A0A7S2VWK6_9STRA2.250e-1228.04Phosphoglycerate kinase (Fragment) n=2 Tax=Triparm... [more]
A0A3P1ZZ17_9DELT1.960e-736.61Phosphoglycerate kinase n=1 Tax=Desulfovibrio sp. ... [more]
A0A7Y2TTX2_9GAMM2.630e-737.27Phosphoglycerate kinase n=3 Tax=Xanthomonadales ba... [more]
A0A2E2TW43_9GAMM4.590e-737.27Phosphoglycerate kinase n=1 Tax=Legionellales bact... [more]
A0A1G7MKF3_9DELT6.090e-735.71Phosphoglycerate kinase n=2 Tax=Desulfovibrio lega... [more]
A0A231P3G7_9DELT1.070e-634.82Phosphoglycerate kinase n=4 Tax=Desulfovibrio TaxI... [more]
A0A2V2G179_9DELT1.090e-636.61Phosphoglycerate kinase n=1 Tax=Desulfovibrionacea... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13168contigEcto-sp13_S_contig13168:2..4686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score1039.6
Seed ortholog evalue6.5e-301
Seed eggNOG ortholog2880.D7FWR0
Model size2136
KEGG rclassRC00002,RC00043
KEGG koko:K00927
KEGG ReactionR01512
KEGG Pathwayko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00552
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0005975,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010319,GO:0015977,GO:0015979,GO:0016020,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019253,GO:0019538,GO:0019685,GO:0030312,GO:0031967,GO:0031975,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0048046,GO:0050896,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901576
Exons6
EggNOG free text desc.phosphoglycerate kinase activity
EggNOG OGsCOG0126@1,KOG1367@2759
EC2.7.2.3
Cds size2136
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13168.2568.1prot_Ecto-sp13_S_contig13168.2568.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13168 2..4686 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462704.6426675-CDS-Ecto-sp13_S_contig13168:1..11271681462704.6426675-CDS-Ecto-sp13_S_contig13168:1..1127Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13168 2..1127 +
1681462704.6589062-CDS-Ecto-sp13_S_contig13168:1654..18581681462704.6589062-CDS-Ecto-sp13_S_contig13168:1654..1858Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13168 1655..1858 +
1681462704.6689308-CDS-Ecto-sp13_S_contig13168:2237..24991681462704.6689308-CDS-Ecto-sp13_S_contig13168:2237..2499Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13168 2238..2499 +
1681462704.68137-CDS-Ecto-sp13_S_contig13168:3076..32511681462704.68137-CDS-Ecto-sp13_S_contig13168:3076..3251Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13168 3077..3251 +
1681462704.6902616-CDS-Ecto-sp13_S_contig13168:3516..37741681462704.6902616-CDS-Ecto-sp13_S_contig13168:3516..3774Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13168 3517..3774 +
1681462704.7030597-CDS-Ecto-sp13_S_contig13168:4575..46861681462704.7030597-CDS-Ecto-sp13_S_contig13168:4575..4686Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13168 4576..4686 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13168.2568.1

>prot_Ecto-sp13_S_contig13168.2568.1 ID=prot_Ecto-sp13_S_contig13168.2568.1|Name=mRNA_Ecto-sp13_S_contig13168.2568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=712bp
GPQARAAAAAKAGNPKASFLALAYGEVSSRVAAAAESFETSLSEGEGARK
EVVAAARRAAVLEGPDGLLSGRDAVARRGDGTGGSRGGASREDSRGPISP
SPSPPPPPPLLSRLGALKWEDVEGRRILLHVDLSKGATPEDGTYGGSLGA
GGGDGTGHDGTGGGAGQQEFPEQVRLVAEQVREVLSAKPAAVAIVSEMAP
PALAAAVAAATATLKMNNSEDVDKQENSSQSQPLAGPDTQQQEQQPSAQH
PPAGDPTAAQTWSSSAESGSLRASAAAVSSLLGMEVDFYDTVPDLAAALE
RCAAAGGREGGGLPGTGGGDDVGAGSGGLPPFGMVPLMMAERLSLPGVVP
APPVDEPELSDCEEERLPDFSWESEEAEAAAEHAKEIEAARLKAQGPREG
DLGELLAGVVDVAVMDAPRALYEPRRKLPWGPVPTTGLTVAGSGVHGDIT
AMAYLTEASDRPLLAILGGGSLEPRLKLIDGLLDLVDTLAIGGGLAATFV
AASSTEAATVTGWKEDGAVDASGISGNNTQSMGTAEVQEEAAAAEAKKRA
KARKNRWTGKGTAGKPRDPLDVVEAARRLLVKARKRGVEVILPSDFVVGD
IEVDENGPLPGQVLSGDAGPDNDDEDNDNNGNGKDSTAGSAAPGGEGAGA
DGVTGAAALDVEPEDPAMGFEYEGETMDVLLEDGIPKGFHPMDVGPQTTA
AFRVSVKFFFM*
back to top

mRNA from alignment at Ecto-sp13_S_contig13168:2..4686+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13168.2568.1 ID=mRNA_Ecto-sp13_S_contig13168.2568.1|Name=mRNA_Ecto-sp13_S_contig13168.2568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4685bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13168:2..4686+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGACCGCAGGCGCGCGCGGCGGCGGCGGCCAAGGCCGGCAACCCCAAGGC CAGTTTCCTTGCCCTAGCGTACGGCGAGGTGTCTTCCCGAGTCGCCGCTG CCGCCGAGAGCTTCGAGACCAGCTTGTCCGAAGGCGAAGGTGCGCGCAAG GAGGTCGTGGCTGCTGCCCGCCGCGCCGCTGTTCTAGAGGGGCCCGACGG TCTTCTGAGCGGGAGAGATGCGGTCGCCCGCCGCGGAGATGGCACCGGCG GCAGCCGCGGCGGTGCCAGCAGGGAAGACAGCCGTGGTCCGATATCACCA TCACCATCACCGCCACCGCCACCGCCACTGCTCTCTCGGCTGGGCGCTCT CAAGTGGGAAGATGTAGAGGGTAGACGTATTCTCTTGCACGTTGATCTCT CGAAGGGGGCGACGCCGGAAGATGGCACGTACGGGGGTAGCCTCGGCGCG GGGGGTGGCGATGGTACAGGTCACGATGGTACGGGCGGCGGCGCTGGTCA ACAGGAGTTTCCGGAACAGGTGCGGTTGGTGGCGGAACAGGTGCGGGAAG TGCTGTCGGCAAAGCCCGCTGCGGTGGCAATTGTGTCCGAGATGGCTCCG CCTGCTCTCGCCGCTGCCGTCGCCGCCGCTACCGCCACCCTCAAAATGAA CAACTCAGAGGATGTCGACAAGCAGGAAAATTCTTCCCAGAGCCAACCAT TGGCTGGACCAGACACGCAACAACAAGAACAACAACCGTCCGCACAGCAC CCTCCCGCCGGTGATCCAACAGCCGCTCAAACGTGGTCGTCCAGTGCCGA GTCTGGCTCCCTCCGCGCCTCCGCCGCTGCGGTGTCGAGTCTTCTCGGCA TGGAAGTCGACTTCTATGACACCGTGCCGGACCTAGCAGCGGCGCTGGAG CGGTGTGCAGCAGCAGGAGGAAGAGAAGGAGGAGGTTTACCAGGCACCGG TGGCGGGGATGATGTCGGGGCCGGGTCGGGCGGCTTGCCGCCGTTCGGAA TGGTGCCGCTGATGATGGCCGAGAGGCTGAGCTTACCGGGAGTTGTGCCG GCCCCGCCGGTGGATGAACCCGAGCTCAGCGACTGCGAGGAGGAGCGGCT CCCGGACTTCTCGTGGGAAAGCGAAGGTAGGATTAAGAGCGCGATTACGG GAGGGAGCCCGGGACGGGTTCACTTCAGCCCTTGTTTGAGGAGCCCACGA GTTTTGTGTTTTTTCTCTGGTTGTAGGGGAGGGTGGGGGTTCCTGTACCA TCGCTTTTAGTGCAGGTCTGGGCCGGGGCGGGGGTGTTCTAGGTTAGGTG TCTGCGGGAAATACAGAGGGGGTTGAGGGATGGGTTGATACGTGCGCATT CATTTTTTCCGTCTTTGTGCCTTGGAATTTGTTTTTGAGAGTTTTAGGTT CGTTCGTTGGCAAGCGAAGAATGGTGTTGCTGAGGTCACCCAACTCTCGC TCTCTATCTATCTATCTATCTCTCTCTCGCCCAACCCAAAAGCACGAATG AATGTTGACACGGGCACATAGGTACCTGCGCCTGGGGTTTGTGAAGTCCA ACGCACAACGAAAGGGACTGCAAAAAACTTGAAACCAAAAATCGGAAAAC CTTTTTTGAAAAAACGAAATCCCATCACAAAACTGAAACACGAACCAACT CAGAGGCTGAAGCGGCCGCCGAACACGCCAAGGAGATCGAAGCAGCTCGT CTGAAGGCGCAGGGTCCCAGGGAAGGAGACCTCGGTGAGCTCCTAGCCGG CGTGGTGGATGTGGCGGTGATGGACGCGCCGAGAGCGTTGTACGAGCCTC GCCGGAAGCTGCCATGGGGTCCGGTGCCTACGACCGGTCTCACCGTTGCT GGGTCAGGTAAGAGGACCACGAACGGTGGTGCAGGAACCGCTGAATCCTT TTTTTTTTGTTGCGTTTTGGCGAGAATCTGGGCGAGTAGAAAGTTCTTTT TGGCCGCGCTGCCCCGGCCGCAAGGCAGACGTAGAATCTTACCGCTCACG TTCAGTTGACTGATTCCGCAGTTTGCGAACAATCTGCATTTTTTGGACAA AAGCCTAGCTTATGCCACGAAAACAGTCGATCAGCTACGCAAGAACCTCC CCTTCCCAATGCACGCTCTGACAAACAACATCCGAATGTGGACGTGTCCC TGTCTTCCTTCCCTTCGCACAACAAAACCGACCCGTCATTTTCTGTTTCT CCTCGTCGTCCTCTACCTCCTTGGACAAAAATGCAGGTGTTCACGGAGAT ATAACCGCCATGGCGTACCTTACCGAGGCCTCAGACAGGCCTCTTCTGGC AATACTCGGCGGAGGTAGCCTCGAACCGCGGCTGAAGCTCATCGACGGCC TCCTGGACCTGGTCGACACTCTCGCAATAGGAGGCGGGTTAGCCGCCACC TTCGTCGCGGCTTCGTCGACTGAGGCAGCAACGGTAACTGGGTGGAAGGA GGATGGTGCGGTAGATGCCAGCGGCATCAGCGGCAACAATACCCAAAGGT TCGTACCCCGTAGGTTGCATCGGTAATTTAGCATCGGGACTCTTTTCTGT TGAGAACACCTGTAACGTCGTTTACCGCCATACTTTCAGCACCCCCCTTG CCGCCGAACTCCACGAAGCGTCTACTCCCTTCCGAAGATCTTGGTTGTGA GCAAGAGTGGGGCAGGATGGAATAAGTTTTGTACCACAGTTCGTGCAGCC GAGATGAAGTGTGATAGCCCCGGCGCCCGCAAGAGCCGATATGGAGTATG CGGGGTACAGCGTTGGGGGAGAATGGAGTAAACATCCTCTCTGGCGAGAC AAAGGGGGATGGTGGATGCAAGAAGCGCTCTCTGTGGGCTTCAGAAATCC GCGCGGTTCGAGTTCCTTTTTATGGGGGTTTTCTCTTGCGAGAGGTGGTG TAAATGGCCGCACTATGACTTTGAGATAGCGCAACCGCCTCATCTTGCAC AATACGTTCTCGCCGAAAGTGAGGTGCAGATTCAAGAGCTGTGTTTCGTC GTGACGCATGAACGGTCCAAGCACCACCCGCTTGAACAAACACTGCTTTT CTGGCGAATTTTCTTGCGGCAGCAGTATGGGCACCGCGGAAGTGCAAGAA GAAGCGGCAGCAGCGGAAGCAAAAAAACGGGCAAAGGCCAGGAAGAATAG ATGGACTGGCAAGGGCACGGCGGGGAAGCCTCGCGATCCCCTCGATGTGG TAGAGGCGGCGAGGAGACTGTTGGTCAAGGCTCGAAAACGAGGGGTAGAG GTAAGACGAAGCCAAATACATACGTTGTGGTTGTTTCATTTCACCCCTGC CGCCCACTTGAACAAGGACCGGGTGCATACGCTGACGTACGTATCGTTAC TCTCTCCGGTGTTGTGCGTTACGCGGTTGCACACGGCGGAGCGAATCAGC CTGGAAGAAAAGGTGAACGACTGCGTCAAGTGACAATTCTTAGCAGTGAC AAGATTTTTTATCGGAGTTTTCTTCGAGAACTACATGACGTTGTGGCATC TGACGTGTGTACCAGGTTATCCTTCCGTCGGATTTCGTGGTCGGTGACAT CGAGGTAGACGAGAACGGCCCCTTGCCGGGACAAGTCCTTTCCGGAGACG CAGGCCCAGACAACGACGACGAAGACAACGACAACAACGGCAACGGCAAA GATAGCACCGCTGGCAGCGCTGCACCGGGCGGCGAGGGTGCGGGTGCCGA CGGGGTTACGGGCGCGGCGGCCCTGGACGTGGAGCCGGAAGACCCGGCCA TGGGATTCGAGTACGAGGGCGAGGTGACCACGAAGAAGCCGATTGTGCGC ATGCATCACCTACGACCGCTTGTGAACATTGAGTCAAAGGGGTCGACTCC GTACCAATCAGGCTCCCATTAATCGATGAACACATGGAACGAAAGGGGTG TGTTTTCATTGAACAGCCGGAACCAAAACCTGGAGTATGCAGTCGCAACG AAAACTGAACAATACACGGGAGGAGACATAGAATAGGCACAAGCGCTTGT TACTTTCGTTTGGAGCTTTCGGGATGTGTGAGCGCGCCGCGATGCGATGG TTAGCATGTTAGGATCCATTCGTTAGGTGCTGCAGTAGGTGTATTCTTGC TTGTACCGTTTGCTGGTCGGCCCAACGATTCCACCTACCGAAAAAGTGTG TAAGTTCTGTAAATACCCACTTTAGAGGTCGTGCAGCCGTGGTAATACGT GATGCTTACATAGGGAGTGCCACTTACCGCCCCACAGCTGTCGACCCACG CGAGCAACAACACCTTTCTCCCCTCGCTCTCCCGCGTCTTTTTACTTCTG CCCTGCCGTATCCACCACAGAATCAAACGCTCCGCCAGTCAGGTCATGAA ACGTCCTATCAAGTCCAACAATGTGCGAGGCAGATGGCAAAACATGTCCC CCAACCCCGTTACGACACGAAATATTTGAAATATCAAAAGTATTGACATG CGGCAGCCATCCAGGTAACACCCCGTACCTCTTCTTTTTCGCCCACTCCC CGCACCCCTCTCCCAACTACGGCCTCGCCTCTTGCACTTGGACTCCACCT GGCACGGCCGGTGCTCTTCGACAGACCATGGATGTTTTACTCGAAGACGG CATTCCTAAGGGTTTCCACCCCATGGATGTCGGGCCCCAGACAACCGCCG CTTTCCGGGTAAGTGTGAAATTTTTTTTCATGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13168:2..4686+

>mRNA_Ecto-sp13_S_contig13168.2568.1 ID=mRNA_Ecto-sp13_S_contig13168.2568.1|Name=mRNA_Ecto-sp13_S_contig13168.2568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2136bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13168:2..4686+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGACCGCAGGCGCGCGCGGCGGCGGCGGCCAAGGCCGGCAACCCCAAGGC
CAGTTTCCTTGCCCTAGCGTACGGCGAGGTGTCTTCCCGAGTCGCCGCTG
CCGCCGAGAGCTTCGAGACCAGCTTGTCCGAAGGCGAAGGTGCGCGCAAG
GAGGTCGTGGCTGCTGCCCGCCGCGCCGCTGTTCTAGAGGGGCCCGACGG
TCTTCTGAGCGGGAGAGATGCGGTCGCCCGCCGCGGAGATGGCACCGGCG
GCAGCCGCGGCGGTGCCAGCAGGGAAGACAGCCGTGGTCCGATATCACCA
TCACCATCACCGCCACCGCCACCGCCACTGCTCTCTCGGCTGGGCGCTCT
CAAGTGGGAAGATGTAGAGGGTAGACGTATTCTCTTGCACGTTGATCTCT
CGAAGGGGGCGACGCCGGAAGATGGCACGTACGGGGGTAGCCTCGGCGCG
GGGGGTGGCGATGGTACAGGTCACGATGGTACGGGCGGCGGCGCTGGTCA
ACAGGAGTTTCCGGAACAGGTGCGGTTGGTGGCGGAACAGGTGCGGGAAG
TGCTGTCGGCAAAGCCCGCTGCGGTGGCAATTGTGTCCGAGATGGCTCCG
CCTGCTCTCGCCGCTGCCGTCGCCGCCGCTACCGCCACCCTCAAAATGAA
CAACTCAGAGGATGTCGACAAGCAGGAAAATTCTTCCCAGAGCCAACCAT
TGGCTGGACCAGACACGCAACAACAAGAACAACAACCGTCCGCACAGCAC
CCTCCCGCCGGTGATCCAACAGCCGCTCAAACGTGGTCGTCCAGTGCCGA
GTCTGGCTCCCTCCGCGCCTCCGCCGCTGCGGTGTCGAGTCTTCTCGGCA
TGGAAGTCGACTTCTATGACACCGTGCCGGACCTAGCAGCGGCGCTGGAG
CGGTGTGCAGCAGCAGGAGGAAGAGAAGGAGGAGGTTTACCAGGCACCGG
TGGCGGGGATGATGTCGGGGCCGGGTCGGGCGGCTTGCCGCCGTTCGGAA
TGGTGCCGCTGATGATGGCCGAGAGGCTGAGCTTACCGGGAGTTGTGCCG
GCCCCGCCGGTGGATGAACCCGAGCTCAGCGACTGCGAGGAGGAGCGGCT
CCCGGACTTCTCGTGGGAAAGCGAAGAGGCTGAAGCGGCCGCCGAACACG
CCAAGGAGATCGAAGCAGCTCGTCTGAAGGCGCAGGGTCCCAGGGAAGGA
GACCTCGGTGAGCTCCTAGCCGGCGTGGTGGATGTGGCGGTGATGGACGC
GCCGAGAGCGTTGTACGAGCCTCGCCGGAAGCTGCCATGGGGTCCGGTGC
CTACGACCGGTCTCACCGTTGCTGGGTCAGGTGTTCACGGAGATATAACC
GCCATGGCGTACCTTACCGAGGCCTCAGACAGGCCTCTTCTGGCAATACT
CGGCGGAGGTAGCCTCGAACCGCGGCTGAAGCTCATCGACGGCCTCCTGG
ACCTGGTCGACACTCTCGCAATAGGAGGCGGGTTAGCCGCCACCTTCGTC
GCGGCTTCGTCGACTGAGGCAGCAACGGTAACTGGGTGGAAGGAGGATGG
TGCGGTAGATGCCAGCGGCATCAGCGGCAACAATACCCAAAGTATGGGCA
CCGCGGAAGTGCAAGAAGAAGCGGCAGCAGCGGAAGCAAAAAAACGGGCA
AAGGCCAGGAAGAATAGATGGACTGGCAAGGGCACGGCGGGGAAGCCTCG
CGATCCCCTCGATGTGGTAGAGGCGGCGAGGAGACTGTTGGTCAAGGCTC
GAAAACGAGGGGTAGAGGTTATCCTTCCGTCGGATTTCGTGGTCGGTGAC
ATCGAGGTAGACGAGAACGGCCCCTTGCCGGGACAAGTCCTTTCCGGAGA
CGCAGGCCCAGACAACGACGACGAAGACAACGACAACAACGGCAACGGCA
AAGATAGCACCGCTGGCAGCGCTGCACCGGGCGGCGAGGGTGCGGGTGCC
GACGGGGTTACGGGCGCGGCGGCCCTGGACGTGGAGCCGGAAGACCCGGC
CATGGGATTCGAGTACGAGGGCGAGACCATGGATGTTTTACTCGAAGACG
GCATTCCTAAGGGTTTCCACCCCATGGATGTCGGGCCCCAGACAACCGCC
GCTTTCCGGGTAAGTGTGAAATTTTTTTTCATGTGA
back to top