Homology
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
D8LR67_ECTSI (Uroporphyrinogen-III C-methyltransferase, putative chloroplast n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR67_ECTSI)
HSP 1 Score: 283 bits (724), Expect = 9.310e-93
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQGLLSDAAEGMFAGVDKERVASAAERVAEKKEGLFSEKAGDKVPVRRQA 453
QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELC DLVRRSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQGLLSDAAEGMFAGVDKERVASAAERVAEKKEGLFS +AG+KVPVRRQA
Sbjct: 252 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCADLVRRSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQGLLSDAAEGMFAGVDKERVASAAERVAEKKEGLFSGEAGEKVPVRRQA 402
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA)
HSP 1 Score: 152 bits (384), Expect = 1.450e-40
Identity = 73/110 (66.36%), Postives = 88/110 (80.00%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQGLLSDAA 330
QV LGTGY +DY PDI DYHP++TAVFLMA+GRL+ELC DL+RR YP TPVAI+E+ASTP QR +K TV+TI+ VA V+APATI+VG+VV VLHG QGL+ D A
Sbjct: 434 QVVLGTGYAKDYGTPDISDYHPEQTAVFLMAVGRLKELCADLMRRGYPAATPVAIVESASTPTQRTVKATVETITAVATEHAVRAPATIIVGDVVRVLHGDAQGLIQDVA 543
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
A0A6T5QQD2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QQD2_HETAK)
HSP 1 Score: 118 bits (295), Expect = 4.560e-29
Identity = 55/107 (51.40%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQGLLS 321
Q+ +GTGYGQ+ + I YHP++TAVFLMA+GRL LC DL YP D PVAIIE ASTP QR++ G + +I +A +VK P+ +V G VV+ LHG ++GL++
Sbjct: 220 QLVIGTGYGQNCTKTGITPYHPERTAVFLMAVGRLPTLCADLAAEGYPADCPVAIIEKASTPEQRLVLGKISSIVALAEEHRVKPPSIVVFGAVVAALHGAKEGLVA 326
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
A0A7S4QY92_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QY92_9STRA)
HSP 1 Score: 111 bits (277), Expect = 7.660e-28
Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVR-RSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQGLLSDAAEGMF 342
QV + TGYG++ PD+ YHP++T VFLMA+GRL LCE L +YP+ PVAI+ENA P QR I G+++ I+ +A KV P+TIVVG+VV VL E G++++ G+
Sbjct: 26 QVVMCTGYGRENTSPDLIQYHPEQTVVFLMAVGRLRTLCERLQSLANYPSTVPVAIVENAGRPFQRTIVGSIENIADIAEAAKVVPPSTIVVGDVVRVLLEDENGIIAEKTNGVM 140
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
B8C0W2_THAPS (TP_methylase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0W2_THAPS)
HSP 1 Score: 107 bits (268), Expect = 4.180e-26
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRS-YPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVL 294
QV + TGYG++ P++ YH ++T VFLMA+GRL LCE+LV+ + YP +TPV I+E A P QRV+ GT++TI+ +A VK P+TIVVGEVV+VL
Sbjct: 135 QVVMCTGYGRNNTSPELIQYHKEQTVVFLMAVGRLRTLCENLVKMAGYPIETPVGIVERAGCPDQRVVVGTMETIADLAEEYDVKPPSTIVVGEVVNVL 233
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
A0A7S4QY78_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QY78_9STRA)
HSP 1 Score: 111 bits (277), Expect = 6.920e-26
Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVR-RSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQGLLSDAAEGMF 342
QV + TGYG++ PD+ YHP++T VFLMA+GRL LCE L +YP+ PVAI+ENA P QR I G+++ I+ +A KV P+TIVVG+VV VL E G++++ G+
Sbjct: 290 QVVMCTGYGRENTSPDLIQYHPEQTVVFLMAVGRLRTLCERLQSLANYPSTVPVAIVENAGRPFQRTIVGSIENIADIAEAAKVVPPSTIVVGDVVRVLLEDENGIIAEKTNGVM 404
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
K0RL04_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RL04_THAOC)
HSP 1 Score: 105 bits (262), Expect = 2.720e-25
Identity = 51/99 (51.52%), Postives = 72/99 (72.73%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRS-YPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVL 294
QV + TGYG+D PD+ Y ++T VFLMA+GRL LC++L R++ +P DTPVAI+E A P QR + GT+++I+ +A V+ P+TIVVGEVV+VL
Sbjct: 104 QVVMCTGYGRDNTSPDLIQYQKEQTVVFLMAVGRLRTLCDNLHRKANFPVDTPVAIVERAGCPDQRTVVGTMESIADIAEANNVRPPSTIVVGEVVNVL 202
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
A0A6U3YBR3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3YBR3_9STRA)
HSP 1 Score: 107 bits (268), Expect = 8.350e-25
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRS-YPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVL 294
QV + TGYG++ PD+ YHP++T VFLMA+GRL +LC+ L+ ++ YP TPV I+E A P QR + GT+++I+ +A V+ P+TIVVGEVV+VL
Sbjct: 264 QVVMCTGYGKNNTSPDLIQYHPEQTVVFLMAVGRLRKLCDSLIHQAGYPPQTPVGIVERAGCPEQRTVVGTMESIADLAERFNVRPPSTIVVGEVVNVL 362
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
A0A7S0HSB0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HSB0_9CRYP)
HSP 1 Score: 106 bits (265), Expect = 1.410e-24
Identity = 51/103 (49.51%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQ 309
+V TG G++ + PD+ YHP++T VFLMA+GRLE L +DL R YP TPV IIE A+TP +R I+GT+ I +A +++ P+ IVVGE V+VL PE+
Sbjct: 239 RVVFCTGMGKEESVPDVPAYHPEQTCVFLMAVGRLEALTDDLTREGYPQSTPVGIIERATTPHERTIRGTISDIVNLAHEEQIRPPSVIVVGEAVNVLCKPEK 341
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Match:
A0A7S2LDV1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LDV1_9STRA)
HSP 1 Score: 105 bits (261), Expect = 3.180e-24
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 1 QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVR-RSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQGLLSDAAEGM 339
QV + TGYG++ PD+ YH ++T VFLMA+GRL ELC++L +YP DTPVA++E A P QR + G ++TI+ +K P+TIVVGEVV VL G + + +G+
Sbjct: 207 QVVMCTGYGRNGTSPDLIQYHKEQTVVFLMAVGRLRELCDNLCNLANYPRDTPVAVVEKAGCPEQRTVVGDLNTIADYCIRYDIKPPSTIVVGEVVDVLLNEGVGSMEERVQGL 320
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10226.250.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 9.31e-93 / Id = 97.35 Expect = 1.45e-40 / Id = 66.36 Expect = 4.56e-29 / Id = 51.40 Expect = 7.66e-28 / Id = 47.83 Expect = 4.18e-26 / Id = 53.54 Expect = 6.92e-26 / Id = 47.83 Expect = 2.72e-25 / Id = 51.52 Expect = 8.35e-25 / Id = 50.51 Expect = 1.41e-24 / Id = 49.51 Expect = 3.18e-24 / Id = 45.61 Sequence D8LR67_ECTSI A0A835ZDP8_9STRA A0A6T5QQD2_HETAK A0A7S4QY92_9STRA B8C0W2_THAPS A0A7S4QY78_9STRA K0RL04_THAOC A0A6U3YBR3_9STRA A0A7S0HSB0_9CRYP A0A7S2LDV1_9STRA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10226.250.1
>prot_Ecto-sp13_S_contig10226.250.1 ID=prot_Ecto-sp13_S_contig10226.250.1|Name=mRNA_Ecto-sp13_S_contig10226.250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
QVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSYPTD back to top mRNA from alignment at Ecto-sp13_S_contig10226:134..1019+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10226.250.1 ID=mRNA_Ecto-sp13_S_contig10226.250.1|Name=mRNA_Ecto-sp13_S_contig10226.250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=886bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10226:134..1019+ (Ectocarpus species13 EcNAP12_S_4_19m)CAGGTAACGCTCGGCACCGGTTACGGGCAGGACTACGCGCGCCCGGACAT
CTGCGACTACCACCCGCAGAAGACGGCCGTCTTCCTCATGGCGATCGGTC
GCCTGGAGGAGCTTTGCGAGGACCTCGTGCGCCGCTCCTACCCGACAGAC
ACCCCCGTGGCCATCATCGAGAACGCCTCCACTCCTCGACAAAG GTATTG
AGTCGTGGTGGGCGGGGGCTGCTTTCTTCGTCGTGTGTGCAGCAGACGCC
ACGGTCTGTTCGGTTGTGTTGTAGTGGGGAGTAGGACTTGGTGCTACGCT
GGTTGTCTTGTGTCTATGCGCTTACGATAAGCGATGGGTCGCCCTCATGT
GTCTTTCGTGCTGAGTACATTCATGGTGGCGGTGGCCATTTTTCTTGTGG
CGGAGTTTGGACGGAAAAAGTGTTCGGTGGATGGCGTGGGAGTTCAGTCC
GTAGCCGTGGCTTGTCTCTTGTACTTTTCGTCTTTGTTACTTTGGCGATG
CCGATATTCACTCCTCATTTCCCTACCAACGCATATACACGCATCCCTCC
CGTTGTTGCAGCCCCCCCCCCCACCACCTGTCCATCGTTTCCTCCGTGCC
AATTGATGCTACAACGCTTGGCAGGGTCATCAAGGGCACCGTGGACACGA
TTTCGAAGGTGGCGCGCGGGCTGAAGGTGAAGGCGCCGGCCACCATCGTC
GTCGGGGAGGTCGTGAGCGTCCTGCACGGGCCCGAGCAGGGCCTCCTAAG
CGATGCCGCGGAGGGGATGTTCGCTGGCGTGGACAAGGAGAGGGTCGCGA
GCGCCGCCGAGAGAGTCGCGGAGAAGAAGGAAGGCCTGTTCAGCGAAAAA
GCGGGGGACAAGGTGCCTGTTCGCCGTCAAGCGTGA back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10226:134..1019+
>mRNA_Ecto-sp13_S_contig10226.250.1 ID=mRNA_Ecto-sp13_S_contig10226.250.1|Name=mRNA_Ecto-sp13_S_contig10226.250.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10226:134..1019+ (Ectocarpus species13 EcNAP12_S_4_19m) back to top