prot_Ecto-sp13_S_contig13.2458.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13.2458.1
Unique Nameprot_Ecto-sp13_S_contig13.2458.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length249
Homology
BLAST of mRNA_Ecto-sp13_S_contig13.2458.1 vs. uniprot
Match: A0A7S4MSU8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSU8_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.130e-21
Identity = 91/266 (34.21%), Postives = 134/266 (50.38%), Query Frame = 0
Query:    2 WKCLHDDPGTSKLLKQIYG---GSRPEVSYPKLRTAVPRENIPPEFKDARHHGSGNTGR---GAEKKNENIVRVPKFRGA-RSDGPAPIDSVVTRRKRAGRIHQEQAAVRERVEH-YRPPYVKEVG-ECEKSRLAERFEFGGGKALPEEMTGPVMPIPSEARWKASEERRIAGA-----LRRRKGLPDMDDE--GGGAVGGDKGSAVPSTT-----MFEQVASEIEERQ--QFLLQARESGVPCDRESEARIMAEISLRMRELKRL 244
            W+    D    +LL ++YG   G +P+++YPKL+T   R++   E    +  G G   R   G +++    V VPK   A R    A   + + RRK     H++ A + E V H +RPP   E   + EK RL E F +GGG ALPEE+T P  P+PSE + +  E RR+  A      RR +G  + +D+     ++   + S   S       MF+QV  EIEER+  QF ++   SG      + A+I  EIS RM+EL +L
Sbjct:   21 WRVFQHDTEAGRLLSRLYGVQPGGKPQINYPKLKT---RKSCSTERAHWKSPGQGEVDRKRAGFDRRRAASVSVPKVGSAVRRGETASAVTFIPRRKNEVACHEDLACI-ESVRHTFRPPNRSEYSTDREKDRLNELFTYGGGVALPEELTLPEAPLPSEEKHRRVEARRVEKAKCRRQARRNRGSKEDEDDLSDDSSLSNSRESEAMSDKGHNDRMFDQVLGEIEERRMFQFSMEEASSGAL----TRAQIADEISSRMKELVKL 278          
BLAST of mRNA_Ecto-sp13_S_contig13.2458.1 vs. uniprot
Match: A0A7S2W819_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W819_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.440e-21
Identity = 89/253 (35.18%), Postives = 126/253 (49.80%), Query Frame = 0
Query:    2 WKCLHDDPGTSKLLKQIYGGSRPEVSYPKLRTA----VPRENIPPEFKDARHHGSGNTGRGAEKKNENIVRVPKFRGARSDGPAPIDSVVTRRKRAGRIHQEQAAVRERVEHYRPPYVKEVGECEKSRLAERFEFGGGKALPEEMTG-PVMPIPSEARWKASEERRIAGALRRRKGLPDMDDEGGGAVGGDKGSAVPSTTMF--EQVASEIEERQQFLLQARESGVPCDRESEARIMA-EISLRMRELKRLTP 246
            WK         +LL+QIYG   P V+ P  R +     P E   P            + R  +K  E  V++P  R AR+D       +V+RRKR   I  E    + R+EHYRPP+++ +G+ EK RLAE   F GGK LP EMT  P+   PSE   +  E  RI  A RRR GLP+            + SA  S T    E +  EI+ER++ L   +  G+   R  +A+ +A EI++R+REL+++ P
Sbjct:   23 WKAFDTSSEAGRLLRQIYGSKPPPVNVPLPRRSRNPGPPTEGWRPVSNRVGQVDPRRSTRSIDK--EKAVQIP--RRARADRSYSKIDLVSRRKRGDVIRDELQDAKMRMEHYRPPHLRPMGQ-EKDRLAEICAFKGGKILPAEMTAIPLEVTPSEQVARIKERERIEKARRRRAGLPEPTLT--------RPSAPKSHTQMLEETILDEIDERRKHLEDMQGLGM---RAEDAKTLAGEIAVRVRELRKVNP 259          
BLAST of mRNA_Ecto-sp13_S_contig13.2458.1 vs. uniprot
Match: A0A7S4A5Q9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5Q9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.390e-17
Identity = 84/252 (33.33%), Postives = 120/252 (47.62%), Query Frame = 0
Query:    2 WKCLHDDPGTSKLLKQIYGGS--RPEVSYPKLRTAVPRENIPPEFKDARHHGSGNTGRGAEKKNENIVRVPKFRGARSDGPA--PIDSVVTRRKRAGRIHQEQAAVRERVEHYRPPYVKEVG-ECEKSRLAERFEFGGGKALPEEMTGPVMPIPSEARWKASEERRIAGALRRRKGLPDMDDEGGGAVGGDKGSAVPS-----TTMFEQVASEIEERQQFLLQARESGVPCDRESEARIMAEISLRMRELKR 243
            W+         ++LK++YG S   P ++YPKL T  PR+ +P +F            R    + E    V  +R  +   P   PID V  +R  A  I +    +  R   YRPP V     + EK+RL E  +FGGGKALP+EMT     +PSE R +A EE R+    R+R+GL +           +  +A P      T   EQ++ EIE+R  FL +A+  G+    E   R+  EIS R  EL+R
Sbjct:    7 WQAFDTSTEAGRMLKKLYGSSAGHPNIAYPKL-TTKPRKQMP-KFIPGGAKLDATDARSNSHRREKASTVEPWR-KKYARPTYKPIDFVARKRNTAA-IDEILEDMSMRNAAYRPPRVNGSSTDAEKARLQEIAQFGGGKALPDEMTLGKTTLPSERRAQALEEARVEREWRKRRGLTE-----------EPAAAAPEPKSLETQQIEQISREIEDRAAFLEEAKAMGLKG--EPIKRVEFEISTRKHELER 241          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13.2458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S4MSU8_9STRA2.130e-2134.21Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2W819_9STRA5.440e-2135.18Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S4A5Q9_9STRA2.390e-1733.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007914Uncharacterised protein family UPF0193PFAMPF05250UPF0193coord: 88..244
e-value: 5.6E-8
score: 32.9
IPR007914Uncharacterised protein family UPF0193PANTHERPTHR28348FAMILY NOT NAMEDcoord: 79..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13contigEcto-sp13_S_contig13:49089..52454 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13.2458.1mRNA_Ecto-sp13_S_contig13.2458.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13 48936..53019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13.2458.1 ID=prot_Ecto-sp13_S_contig13.2458.1|Name=mRNA_Ecto-sp13_S_contig13.2458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=249bp
MWKCLHDDPGTSKLLKQIYGGSRPEVSYPKLRTAVPRENIPPEFKDARHH
GSGNTGRGAEKKNENIVRVPKFRGARSDGPAPIDSVVTRRKRAGRIHQEQ
AAVRERVEHYRPPYVKEVGECEKSRLAERFEFGGGKALPEEMTGPVMPIP
SEARWKASEERRIAGALRRRKGLPDMDDEGGGAVGGDKGSAVPSTTMFEQ
VASEIEERQQFLLQARESGVPCDRESEARIMAEISLRMRELKRLTPSA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007914UPF0193