prot_Ecto-sp13_S_contig12963.2434.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12963.2434.1
Unique Nameprot_Ecto-sp13_S_contig12963.2434.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12963.2434.1 vs. uniprot
Match: A0A6H5JW48_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW48_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.010e-9
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0 
Query:    1 VSTESKARLATDDEINDARWYRLRKLGKK 29
            VSTESKARLATDDEINDARWYRLRKLGKK
Sbjct:   17 VSTESKARLATDDEINDARWYRLRKLGKK 45
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BLAST of mRNA_Ecto-sp13_S_contig12963.2434.1 vs. uniprot
Match: D8LLL2_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL2_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.020e-9
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0 
Query:    1 VSTESKARLATDDEINDARWYRLRKLGKK 29
            VSTESKARLATDDEINDARWYRLRKLGKK
Sbjct:  279 VSTESKARLATDDEINDARWYRLRKLGKK 307
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12963.2434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JW48_9PHAE1.010e-9100.00PPIase cyclophilin-type domain-containing protein ... [more]
D8LLL2_ECTSI1.020e-9100.00RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12963contigEcto-sp13_S_contig12963:133..273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12963.2434.1mRNA_Ecto-sp13_S_contig12963.2434.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12963 133..273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12963.2434.1 ID=prot_Ecto-sp13_S_contig12963.2434.1|Name=mRNA_Ecto-sp13_S_contig12963.2434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
VSTESKARLATDDEINDARWYRLRKLGKKARRKITATTWTAAAFQR*
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