mRNA_Ecto-sp13_S_contig12945.2419.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: D8LLL4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLL4_ECTSI) HSP 1 Score: 207 bits (528), Expect = 1.470e-62 Identity = 109/114 (95.61%), Postives = 113/114 (99.12%), Query Frame = 1
Query: 1 QVAALRAHAAEKESGLNMAREENGRLKEGMGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGSSGASDFMGGQRPPDVF 342
+VA L+AHAAEKESGLNMAREENGRLKEG+GMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMG+SGASDFMGGQRPPDVF
Sbjct: 135 EVAVLQAHAAEKESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGASDFMGGQRPPDVF 248
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: A0A836CIB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB6_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.180e-18 Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 76 LKEGMGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAM-GSSGASDFMGGQRPPDVF 342
++E MG ++LER ENRILKRAV IQNT+ K++E QL Q+AA AA Y KR+EQ NYAL VRVQ M G G ++PPDV+
Sbjct: 1 MREAMGALARDLERFQGENRILKRAVNIQNTRCKDVEAQLGAAQEAAAAAAAYAKRVEQVNYALGVRVQQMEGMGGEGGGFMERQPPDVY 90
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: A0A6V1NE11_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NE11_HETAK) HSP 1 Score: 77.8 bits (190), Expect = 2.790e-13 Identity = 43/103 (41.75%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 34 KESGLNMAREENGRLKEGMGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGSSGASDFMGGQRPPDVF 342
KE+ L+ + EN L+ + FQ EL+R+ EN+ILK+AV +QN+K KE E + + QA +++K+LEQTNYAL + ++ +S ++ QRPPDVF
Sbjct: 113 KEASLSQFKIENASLQNQLAQFQHELQRIQEENKILKKAVNLQNSKAKESEQTIKMQEATLVQAVDHIKKLEQTNYALRIHLE---NSKSTPLTFDQRPPDVF 212
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: K3XAW0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAW0_GLOUD) HSP 1 Score: 72.4 bits (176), Expect = 1.450e-11 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 103 KELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGSSGASDFMGGQRPPDVF 342
KE+ERL +EN++LKRA+ IQN + +E + + L+ A QAAE++KRLEQ+NYALSV +Q S+ + F +PPDVF
Sbjct: 110 KEIERLQSENKLLKRAITIQNQQKEECQQENAVLRNLATQAAEHIKRLEQSNYALSVHLQTSTSTSSEHF----QPPDVF 185
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: D0P4Q0_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P4Q0_PHYIT) HSP 1 Score: 67.4 bits (163), Expect = 1.440e-10 Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 115 RLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGSSGASDFMGGQRPPDVF 342
RL EN++LKRAV IQN + +E++ + + L+Q A QAAE++KRLEQ NY L V +Q ++G Q+PPDV+
Sbjct: 31 RLQGENKLLKRAVAIQNQQKEEVQNENNALKQLATQAAEHMKRLEQANYTLRVHLQTSTNAGLGH---QQQPPDVY 103
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: A0A6A3Z7N1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z7N1_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.330e-10 Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 115 RLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGSSGASDFMGGQRPPDVF 342
RL EN++LKRAVGIQN + +E++ + + L+Q A QAAE+++RLEQ NY L V +Q S+G Q+PPDV+
Sbjct: 111 RLQGENKLLKRAVGIQNQQKEEVQHENNALKQLATQAAEHMRRLEQANYTLRVHLQTSTSAGNGH---QQQPPDVY 183
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: A0A5D6XUD9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUD9_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 4.740e-10 Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 1
Query: 1 QVAALRA----HAAEKESGLNMAREENGRLKEGMGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGSSGASDFMGGQRPPDVF 342
++A +RA HA +KE L R E + + ++LERL+ EN++LKRA+ IQ+ + E + + L+ A QAAE++KRLE +NYALSV +Q ++ S +PPDVF
Sbjct: 71 EIARIRAEYEQHAMKKEMELQSCRRELQQARGAAHATARDLERLAGENKLLKRAITIQSQQKDECQQENAVLRNLATQAAEHIKRLEASNYALSVHLQTSTNAATSSRF---QPPDVF 185
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: G4ZQH3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZQH3_PHYSP) HSP 1 Score: 67.4 bits (163), Expect = 7.650e-10 Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 106 ELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGSSGASDFMGGQRPPDVF 342
E+ RL EN++LKRAV IQN + + +E + L+Q A QAAE+++RLEQ NY L V +Q S+G Q+PPDV+
Sbjct: 102 EVARLQGENKLLKRAVNIQNEQNQAMEQENTALKQLATQAAEHIRRLEQANYTLRVHLQTSTSAGLGH---QQQPPDVY 177
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: A0A7S2LD89_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LD89_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.530e-9 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 76 LKEGMGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGSSGASDFMGGQRPPDVF 342
LK G Q + +++ ENRILKRAV IQ + ++ +L G + QA E ++RLEQ N L ++QA SS +DFMG RPPDV+
Sbjct: 152 LKSENGSLQTQNQKVEHENRILKRAVTIQQDRQHQVSAELEGARTFKEQAEERIRRLEQMNLTLQYQMQAQNSSAGNDFMG-LRPPDVY 239
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Match: W4FGH9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FGH9_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.760e-9 Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 34 KESGLNMAREENGRLKEGMGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGSSGAS 306
KE + R E RL+E KE E++ AEN+IL+RAV IQN + +E + L+Q A QAA+++KRLEQTNYAL V + + GA+
Sbjct: 88 KEKDMQEMRVEFDRLREMCMGQAKEFEKIQAENKILRRAVTIQNQQKEEATQENVALKQLAHQAADHIKRLEQTNYALRVHLHTSSAGGAA 178 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12945.2419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12945.2419.1 >prot_Ecto-sp13_S_contig12945.2419.1 ID=prot_Ecto-sp13_S_contig12945.2419.1|Name=mRNA_Ecto-sp13_S_contig12945.2419.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp MAREENGRLKEGMGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGback to top mRNA from alignment at Ecto-sp13_S_contig12945:2940..4765- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12945.2419.1 ID=mRNA_Ecto-sp13_S_contig12945.2419.1|Name=mRNA_Ecto-sp13_S_contig12945.2419.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1826bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12945:2940..4765- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12945:2940..4765- >mRNA_Ecto-sp13_S_contig12945.2419.1 ID=mRNA_Ecto-sp13_S_contig12945.2419.1|Name=mRNA_Ecto-sp13_S_contig12945.2419.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=294bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12945:2940..4765- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |