mRNA_Ecto-sp13_S_contig12900.2390.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: D7FZZ3_ECTSI (Pepsinogen n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ3_ECTSI) HSP 1 Score: 452 bits (1164), Expect = 6.130e-155 Identity = 211/233 (90.56%), Postives = 223/233 (95.71%), Query Frame = 1
Query: 1 PCAREKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDLCSSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWRR 699
P EKP+HMLFGSYDLSI+SEGA WHYTP+I HSRG+L+YWTVKMTAM MVTSSPL TAEEEA+AGEQPA+GYEIP LGGSE+ +LCSSGCYAIVDTGTSGIA+PEDYFYTLAEQITEASGASCKGTTCY+TKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGG+FWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWRR
Sbjct: 261 PSDTEKPNHMLFGSYDLSILSEGAPWHYTPLIPHSRGQLKYWTVKMTAMAMVTSSPLADTAEEEASAGEQPAEGYEIPYLGGSEEGNLCSSGCYAIVDTGTSGIAVPEDYFYTLAEQITEASGASCKGTTCYSTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGNFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWRR 493
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: A0A6H5LLK6_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLK6_9PHAE) HSP 1 Score: 447 bits (1149), Expect = 2.710e-154 Identity = 212/232 (91.38%), Postives = 220/232 (94.83%), Query Frame = 1
Query: 1 PCAREKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDLCSSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWR 696
P EKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRG+LRYWTVKMTAM MVTSSPL TAEEEATA EQPA+GYEIP LGGS +I+LCSSGCYAIVDTGTSGIA+PEDYFYTLAEQITEASGASCKGTTCY TKGSDFPDLMFELYPSN+FILRGEDYTVC+R G+CVVKLQPSFGGDFWILGDVFIEAYYTLFD ENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWR
Sbjct: 167 PSDTEKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGQLRYWTVKMTAMAMVTSSPLADTAEEEATA-EQPAEGYEIPHLGGSAEINLCSSGCYAIVDTGTSGIAVPEDYFYTLAEQITEASGASCKGTTCYGTKGSDFPDLMFELYPSNRFILRGEDYTVCNRRGLCVVKLQPSFGGDFWILGDVFIEAYYTLFDAENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWR 397
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: A0A7S2UUR2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR2_9STRA) HSP 1 Score: 272 bits (696), Expect = 2.040e-88 Identity = 126/231 (54.55%), Postives = 154/231 (66.67%), Query Frame = 1
Query: 1 PCAREKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDLCSSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASW 693
P +KPSH+ FG YDL+IVS A WHYTPVIR S G+ +YWTVKM + ++ P + S +CS+GCYAIVDTGTSGIAIPE Y+Y + IT+ G C+G TCYN + +DFPDL F L P N+ LR EDY CSRWG CV K+QPS+GG +WI+GDVF+EAYYTLFD+EN+RVGFAC G CSGG WHG+GGF+E+ED W
Sbjct: 62 PRDHDKPSHLWFGGYDLNIVSANATWHYTPVIRRSYGDFKYWTVKMLGLEILNG-----------------------PAMPSSIRAQMCSTGCYAIVDTGTSGIAIPEIYYYDVVNYITQ--GLHCRGITCYNAQVTDFPDLTFTLSPDNELPLRAEDYVTCSRWGECVFKIQPSYGGAYWIMGDVFMEAYYTLFDIENMRVGFACAGK-CSGGDWHGKGGFLEVEDSQEW 266
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: A0A7S4DAX8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAX8_HETAK) HSP 1 Score: 276 bits (706), Expect = 3.150e-87 Identity = 132/231 (57.14%), Postives = 157/231 (67.97%), Query Frame = 1
Query: 1 PCAREKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDLCSSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASW 693
P +KPSH+ FG YDLSIVSE A WHYTPVIR S G+ +YWTVKM + ++++ L V A D+CSSGCYAIVDTGTSGIAIPE Y+Y + ITE G C+G TCYN + SDFPDL F L P N+ LR DY CSRWG CV K+QPS+GG +WILGDVF+EAYYTLFDVEN+RVGFAC G C+GG WHG+GGF+E+E+ W
Sbjct: 258 PRDHDKPSHLWFGGYDLSIVSENATWHYTPVIRRSYGDFKYWTVKMYGLQVLSNGGLDVKA-------------------------DMCSSGCYAIVDTGTSGIAIPELYYYEVVNYITE--GLHCRGITCYNVQVSDFPDLTFYLAPDNELPLRAADYVTCSRWGECVFKIQPSYGGAYWILGDVFMEAYYTLFDVENMRVGFACDGT-CTGGDWHGKGGFLELEEAQEW 460
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: A0A835ZFV3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV3_9STRA) HSP 1 Score: 258 bits (658), Expect = 2.900e-80 Identity = 122/232 (52.59%), Postives = 151/232 (65.09%), Query Frame = 1
Query: 1 PCAREKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDLCSSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWR 696
P +PSH+ FG +DL IVS A WHYTPV+R + GELRYWTVK+T + +V T G+ G + C GC AIVDTGTSGIA+PE + L Q+T+ G +C+GT C K SDFPDL+F +YP N F LR EDY VC+ WG C+VKLQPSFGG +WILGD F++AYY +FDV+NLRVGFAC G C GGTWHG+GG +E+E+ WR
Sbjct: 204 PHDASRPSHLAFGGFDLDIVSANATWHYTPVVRQAYGELRYWTVKVTGVGVV------------GTRGKDR----------GRRVMSQCPGGCLAIVDTGTSGIAVPEVIYGDLVAQVTK--GLNCRGTQCIGAKASDFPDLVFSIYPDNVFPLRNEDYVVCTGWGQCLVKLQPSFGGSYWILGDTFLQAYYAVFDVDNLRVGFACEGT-CQGGTWHGKGGLLELEEAEQWR 410
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: A0A7S2CG53_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG53_9STRA) HSP 1 Score: 249 bits (637), Expect = 6.790e-80 Identity = 121/233 (51.93%), Postives = 147/233 (63.09%), Query Frame = 1
Query: 1 PCAREKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDLCSSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWRR 699
P + PSH++FGSYDL IV A WHYTPVI+ G+ +YWTVKM++MT+ E+ +Q DLC S CYAIVD+GTSGIA+PED + L +T+ G CKG TCY SDFPDL+F L P N+F L EDY CS WG CV+K Q S G +WILGDVFIEAYYTLFDVEN+R+GFAC G C GG WHGQGGF+E++ W +
Sbjct: 36 PDDEKHPSHLVFGSYDLEIVGPNATWHYTPVIKRGYGDFKYWTVKMSSMTV------------ESRRNDQ---------------WDLCKSTCYAIVDSGTSGIAVPEDSYDDLISYVTD--GLHCKGITCYYASESDFPDLVFFLSPDNEFPLLAEDYVSCSHWGECVIKFQVSSGSSYWILGDVFIEAYYTLFDVENMRIGFACDGE-CGGGNWHGQGGFIEVDGPPYWEQ 238
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: F0Y569_AURAN (Peptidase A1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y569_AURAN) HSP 1 Score: 251 bits (641), Expect = 7.860e-78 Identity = 113/231 (48.92%), Postives = 153/231 (66.23%), Query Frame = 1
Query: 1 PCAREKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDLCSSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASW 693
P ++PSH+ FG YDL IV + A WHYTPVI+ G+ +YWTVKMT M +V++ + ++DLC SGCYAIVD+GTSGIA+PE+ + L +T+ G +C+ TCY K +DFP L F+L P N+F + DY CSRWG CV+K Q S G +WILGDVF+EAYYTL+DV+NLRVGFAC G+ C+GGTWHG+GG++E+++ ++W
Sbjct: 235 PDDADRPSHLTFGDYDLGIVGDNATWHYTPVIKRGFGDFKYWTVKMTGMAVVSTDD--------------------------ASELDLCPSGCYAIVDSGTSGIAVPEESYDALVAAVTK--GLNCRDITCYYAKSADFPALTFKLSPDNEFPMHAADYVSCSRWGECVIKFQKSSGSSYWILGDVFMEAYYTLYDVDNLRVGFACAGD-CNGGTWHGKGGYVEVDEVSTW 436
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: A0A7S3JN10_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JN10_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.980e-74 Identity = 111/226 (49.12%), Postives = 147/226 (65.04%), Query Frame = 1
Query: 16 KPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDLCSSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASW 693
K SH++FG+YDL IV A WHYTPV++ G+ +YWTVKM ++ + + D DLCS CYAIVD+GTSGIA+PED + L + +T +CK TCY K SDFPDL+F+L P N+F L+ DY CS+WG CV+K Q S G +WILGDVFIEAYYTL+DV+NLRVGFAC G C+GG+WHG+GG+++++D ++W
Sbjct: 194 KTSHLVFGTYDLDIVGPNATWHYTPVVKRGLGDFKYWTVKMFGLSRLNQN-----------------------------DDDLCSDSCYAIVDSGTSGIAVPEDVYDDLVKLVTREL-TNCKDITCYYAKQSDFPDLVFKLAPDNEFPLKATDYVACSKWGECVIKFQKSSGSTYWILGDVFIEAYYTLYDVDNLRVGFACQGQ-CNGGSWHGRGGYVDVDDVSTW 388
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: A0A7S2SMR0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMR0_9STRA) HSP 1 Score: 229 bits (584), Expect = 2.840e-69 Identity = 112/234 (47.86%), Postives = 141/234 (60.26%), Query Frame = 1
Query: 1 PCAREKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDLC-SSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWRR 699
P + PSH+L G YDLSIV A WHYTPV++ S G+ +YWTVK+T++ AG +LC SS C+AIVD+GTSGIAIP + T+ +T+ G C TCY SDFPDL F L P N+F + DY CS+WG CVVK Q + G +WILGD FIEAYYTLFD EN+RVGFAC+G CSGG+WHG+GGF+E++ W +
Sbjct: 136 PQDAKHPSHLLIGGYDLSIVGSNATWHYTPVVKRSYGDFKYWTVKITSV----------------KAGST----------------ELCDSSMCFAIVDSGTSGIAIPSSQYATVLATVTK--GLQCSDITCYYASASDFPDLYFSLAPDNEFPILASDYVTCSKWGECVVKFQQATGASYWILGDTFIEAYYTLFDAENMRVGFACSGQ-CSGGSWHGKGGFIEVDSPPLWEQ 334
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Match: A0A7S4A4W9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4W9_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.150e-61 Identity = 106/231 (45.89%), Postives = 139/231 (60.17%), Query Frame = 1
Query: 13 EKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVTAEEEATAGEQPADGYEIPPLGGSEDIDL----CSSGCYAIVDTGTSGIAIPEDYFYTLAEQITEASGASCKGTTCYNTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGDFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASW 693
+K SH+ FGSYDLS+V + A+WHYTP++R RG+ E+ T Y + L G E +++ C+ GCY+IVD+GTSG+ +P+D + +T G +CK TCY DFPDL F L P N F LR DY CSRWG CVVK+Q + G +WILGDVF EAYYTL+DVENLRVGFAC G C GG WHG+GG+++++D + W
Sbjct: 283 DKKSHLAFGSYDLSLVGKNASWHYTPLVR--RGD------------------------EDTTLR------YWLTKLKGVE-LEVGDAWCAKGCYSIVDSGTSGLGLPDDVYDDFVAAVTR--GLNCKDVTCYYASEDDFPDLSFSLEPDNVFPLRARDYVSCSRWGECVVKVQKASGSPYWILGDVFTEAYYTLYDVENLRVGFACEGE-CEGGGWHGKGGYVDVDDPSVW 477 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12900.2390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12900.2390.1 >prot_Ecto-sp13_S_contig12900.2390.1 ID=prot_Ecto-sp13_S_contig12900.2390.1|Name=mRNA_Ecto-sp13_S_contig12900.2390.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp MLFGSYDLSIVSEGAAWHYTPVIRHSRGELRYWTVKMTAMTMVTSSPLVVback to top mRNA from alignment at Ecto-sp13_S_contig12900:1503..4848- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12900.2390.1 ID=mRNA_Ecto-sp13_S_contig12900.2390.1|Name=mRNA_Ecto-sp13_S_contig12900.2390.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3346bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12900:1503..4848- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12900:1503..4848- >mRNA_Ecto-sp13_S_contig12900.2390.1 ID=mRNA_Ecto-sp13_S_contig12900.2390.1|Name=mRNA_Ecto-sp13_S_contig12900.2390.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12900:1503..4848- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |