prot_Ecto-sp13_S_contig12900.2389.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12900.2389.1
Unique Nameprot_Ecto-sp13_S_contig12900.2389.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12900.2389.1 vs. uniprot
Match: D7FZZ3_ECTSI (Pepsinogen n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ3_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 2.310e-45
Identity = 86/102 (84.31%), Postives = 87/102 (85.29%), Query Frame = 0 
Query:    1 GGARWAV-TGQGLKGVYRAWMTCWGKGGKRMGRLMRRRLGRGAYHLRVDDPPRFGRSVERVLLLSWGLAVVLAGFVERAGGVCWCIVLLAVGVRPHAAEEGV 101
            GGAR A  TGQGLKGVYRAWMTCW KGGKR GRLM+RRLGRGA H RVDDP RFGRSVERVL LSWGLAVVLA FVERA GVCWCIVLL VGV  HAAE GV
Sbjct:  496 GGARQAAATGQGLKGVYRAWMTCWEKGGKRTGRLMKRRLGRGACHHRVDDPRRFGRSVERVLPLSWGLAVVLACFVERAAGVCWCIVLLVVGVSRHAAEGGV 597
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12900.2389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZZ3_ECTSI2.310e-4584.31Pepsinogen n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12900contigEcto-sp13_S_contig12900:270..674 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12900.2389.1mRNA_Ecto-sp13_S_contig12900.2389.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12900 270..674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12900.2389.1 ID=prot_Ecto-sp13_S_contig12900.2389.1|Name=mRNA_Ecto-sp13_S_contig12900.2389.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
GGARWAVTGQGLKGVYRAWMTCWGKGGKRMGRLMRRRLGRGAYHLRVDDP
PRFGRSVERVLLLSWGLAVVLAGFVERAGGVCWCIVLLAVGVRPHAAEEG
VCLFPSAVVPWESNGDRVRCTIERACFVTLLLVC*
back to top