prot_Ecto-sp13_S_contig10211.235.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10211.235.1
Unique Nameprot_Ecto-sp13_S_contig10211.235.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length39
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10211.235.1 vs. uniprot
Match: D7G6U5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U5_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 7.110e-10
Identity = 30/38 (78.95%), Postives = 31/38 (81.58%), Query Frame = 0 
Query:    1 MQRNGWSCAPGLLATVDHSASIVAAEELFCVENGPGFE 38
            M R G +CAP LLATVDHSASIV AEELF VENGPG E
Sbjct:  154 MHRIGSTCAPDLLATVDHSASIVVAEELFSVENGPGLE 191
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10211.235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6U5_ECTSI7.110e-1078.95MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10211contigEcto-sp13_S_contig10211:422..538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10211.235.1mRNA_Ecto-sp13_S_contig10211.235.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10211 411..660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10211.235.1 ID=prot_Ecto-sp13_S_contig10211.235.1|Name=mRNA_Ecto-sp13_S_contig10211.235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=39bp
MQRNGWSCAPGLLATVDHSASIVAAEELFCVENGPGFE*
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