prot_Ecto-sp13_S_contig10211.237.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10211.237.1
Unique Nameprot_Ecto-sp13_S_contig10211.237.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length245
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10211.237.1 vs. uniprot
Match: A0A6H5KAF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF5_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 4.760e-12
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:  141 DVNHSRLRYYCLARRRNADCKGEATDIKESLPQDMAAVPC 180
            ++N +RLRYYCLARRRNAD K EATD+KESLPQDMAAVPC
Sbjct:   36 NINDTRLRYYCLARRRNADGKREATDVKESLPQDMAAVPC 75
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BLAST of mRNA_Ecto-sp13_S_contig10211.237.1 vs. uniprot
Match: A0A6H5KE46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE46_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.320e-10
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 
Query:  142 VNHSRLRYYCLARRRNADCKGEATDIKESLPQDMAAVP 179
            + +SRLRYYCLARRRNAD K EATD+KESLPQDMAAVP
Sbjct:  116 IPNSRLRYYCLARRRNADGKREATDVKESLPQDMAAVP 153
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10211.237.1 vs. uniprot
Match: D7G6U6_ECTSI (Cytosine-C5 specific DNA methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U6_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 2.040e-8
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0 
Query:  142 VNHSRLRYYCLARRRNADCKGEATDIKESLPQDMAAVP 179
            + +SRLRYYCLARRRNAD  GEATD+K+S PQD+AAVP
Sbjct:  207 IPNSRLRYYCLARRRNADGMGEATDVKKSFPQDVAAVP 244
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10211.237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KAF5_9PHAE4.760e-1282.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE46_9PHAE1.320e-1084.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6U6_ECTSI2.040e-876.32Cytosine-C5 specific DNA methyltransferase n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10211contigEcto-sp13_S_contig10211:4603..5711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10211.237.1mRNA_Ecto-sp13_S_contig10211.237.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10211 4044..5711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10211.237.1 ID=prot_Ecto-sp13_S_contig10211.237.1|Name=mRNA_Ecto-sp13_S_contig10211.237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp
QTPRGGLVFQRRCQATKTQSRRQTPRGGLVLQRRYQATKTQPRWQTPGRS
GGSFFSINIQKGDIPRGEPHKVGHPHDSSKENKRASVEDGKKGGQHVGSL
GPSHYTITHPSCQTPTTGLVRNALRHRCTCSLDASALTRCDVNHSRLRYY
CLARRRNADCKGEATDIKESLPQDMAAVPCFRSPGTWIHPCTGRRRFHSS
YHRKPVHTQTRPFVSTWSPYNQPRRRLSPKATVNTRNARGRSCC*
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