prot_Ecto-sp13_S_contig12854.2354.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12854.2354.1
Unique Nameprot_Ecto-sp13_S_contig12854.2354.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length106
Homology
BLAST of mRNA_Ecto-sp13_S_contig12854.2354.1 vs. uniprot
Match: D8LIF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF9_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 2.960e-52
Identity = 98/106 (92.45%), Postives = 102/106 (96.23%), Query Frame = 0
Query:    1 NTWSSYSGEDGEEPSATFFGNGSGIALVTYVPREAGTSFLYVHVNDLQVAGSPFEVDVSAGPARGANATASGSALALATAGNNSSFIIQARDGGANPAAEESEMKA 106
            NTWSSYSGEDGE+P  TFFGNGSGIALVTYVPREAGTSFLYVHVNDLQVAGSPFEV+VSAGPARGANATASGSALALATAG N+SFIIQARDGGANPAAEESE+ A
Sbjct: 1061 NTWSSYSGEDGEKPLVTFFGNGSGIALVTYVPREAGTSFLYVHVNDLQVAGSPFEVNVSAGPARGANATASGSALALATAGKNASFIIQARDGGANPAAEESEIHA 1166          
BLAST of mRNA_Ecto-sp13_S_contig12854.2354.1 vs. uniprot
Match: G4YY21_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YY21_PHYSP)

HSP 1 Score: 57.4 bits (137), Expect = 2.550e-7
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 0
Query:   30 YVPREAGTSFLYVHVNDLQVAGSPFEVDVSAGPARGANATASGSALALATAGNNSSFIIQARDGGANPAA 99
            Y PR  G + L+V ++ L + GSPF V+V+AGPA G+   ASG AL  A AG  ++F I   D   NP A
Sbjct: 1032 YTPRYVGVTRLHVTLSQLAIVGSPFLVNVTAGPALGSRCVASGDALVSAVAGQRTNFTISIYDAFGNPKA 1101          
BLAST of mRNA_Ecto-sp13_S_contig12854.2354.1 vs. uniprot
Match: A0A6A3MYL0_9STRA (PA14 domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MYL0_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.440e-5
Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0
Query:   29 TYVPREAGTSFLYVHVNDLQVAGSPFEVDVSAGPARGANATASGSALALATAGNNSSFIIQARD 92
            TY P   G + L+V ++   + GSPF VDV+AGPA G+   ASG AL  A AG  ++F I   D
Sbjct:  722 TYTPHFVGGTRLHVALSQQAILGSPFLVDVTAGPALGSRCVASGDALVSAVAGQRTNFTISIYD 785          
BLAST of mRNA_Ecto-sp13_S_contig12854.2354.1 vs. uniprot
Match: A0A225WFM4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFM4_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 5.070e-5
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   29 TYVPREAGTSFLYVHVNDLQVAGSPFEVDVSAGPARGANATASGSALALATAGNNSSFII 88
            TY P   G + L+V ++   + GSPF VDV+AGPA G+   ASG AL  A AG  ++F +
Sbjct: 1022 TYSPHYVGLTRLHVALSQQAIIGSPFLVDVTAGPALGSRCIASGDALVSAVAGQRTNFTV 1081          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12854.2354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LIF9_ECTSI2.960e-5292.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
G4YY21_PHYSP2.550e-745.71Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6A3MYL0_9STRA1.440e-545.31PA14 domain-containing protein n=13 Tax=Phytophtho... [more]
A0A225WFM4_9STRA5.070e-545.00Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 3..61
e-value: 1.8E-9
score: 40.1
IPR017868Filamin/ABP280 repeat-likePROSITEPS50194FILAMIN_REPEATcoord: 1..58
score: 12.835
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 8..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12854contigEcto-sp13_S_contig12854:1115..2408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12854.2354.1mRNA_Ecto-sp13_S_contig12854.2354.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12854 1114..2408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12854.2354.1 ID=prot_Ecto-sp13_S_contig12854.2354.1|Name=mRNA_Ecto-sp13_S_contig12854.2354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
NTWSSYSGEDGEEPSATFFGNGSGIALVTYVPREAGTSFLYVHVNDLQVA
GSPFEVDVSAGPARGANATASGSALALATAGNNSSFIIQARDGGANPAAE
ESEMKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR017868Filamin/ABP280_repeat-like
IPR014756Ig_E-set