prot_Ecto-sp13_S_contig12838.2342.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12838.2342.1
Unique Nameprot_Ecto-sp13_S_contig12838.2342.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length75
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12838.2342.1 vs. uniprot
Match: A0A6H5JUG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG6_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 1.550e-5
Identity = 21/30 (70.00%), Postives = 24/30 (80.00%), Query Frame = 0 
Query:    1 PSLEEWQGISAFCGNPPCRMMESLFAGRNL 30
            P LEEWQGISAFC N PCR +E+LFA R +
Sbjct:  452 PPLEEWQGISAFCDNVPCRSIEALFARRKV 481
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BLAST of mRNA_Ecto-sp13_S_contig12838.2342.1 vs. uniprot
Match: D7FMS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS1_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 2.870e-5
Identity = 21/28 (75.00%), Postives = 23/28 (82.14%), Query Frame = 0 
Query:    1 PSLEEWQGISAFCGNPPCRMMESLFAGR 28
            P LEEWQGISAFC N PCR +E+LFA R
Sbjct:  343 PPLEEWQGISAFCDNVPCRSIEALFARR 370
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12838.2342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUG6_9PHAE1.550e-570.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMS1_ECTSI2.870e-575.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12838contigEcto-sp13_S_contig12838:4446..4920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12838.2342.1mRNA_Ecto-sp13_S_contig12838.2342.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12838 4444..4920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12838.2342.1 ID=prot_Ecto-sp13_S_contig12838.2342.1|Name=mRNA_Ecto-sp13_S_contig12838.2342.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp
PSLEEWQGISAFCGNPPCRMMESLFAGRNLGFSSMVSSEGVADTSGAEPG
RGSDDRTRSDAREQHEGVVAQAAAQ
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