prot_Ecto-sp13_S_contig12838.2341.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12838.2341.1
Unique Nameprot_Ecto-sp13_S_contig12838.2341.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12838.2341.1 vs. uniprot
Match: A0A6H5JUG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG6_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.600e-6
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0 
Query:    1 NACNSTRPSGSLSVPPLEEWDGLSGIYDNGLCRFVQ 36
            NACN TRP GSL+ PPLEEW G+S   DN  CR ++
Sbjct:  438 NACNLTRPQGSLAFPPLEEWQGISAFCDNVPCRSIE 473
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BLAST of mRNA_Ecto-sp13_S_contig12838.2341.1 vs. uniprot
Match: D7FMS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS1_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 2.170e-6
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0 
Query:    1 NACNSTRPSGSLSVPPLEEWDGLSGIYDNGLCRFVQ 36
            NACN TRP GSL+ PPLEEW G+S   DN  CR ++
Sbjct:  329 NACNLTRPPGSLAFPPLEEWQGISAFCDNVPCRSIE 364
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12838.2341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUG6_9PHAE1.600e-661.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMS1_ECTSI2.170e-661.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12838contigEcto-sp13_S_contig12838:2066..2308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12838.2341.1mRNA_Ecto-sp13_S_contig12838.2341.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12838 2066..2354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12838.2341.1 ID=prot_Ecto-sp13_S_contig12838.2341.1|Name=mRNA_Ecto-sp13_S_contig12838.2341.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
NACNSTRPSGSLSVPPLEEWDGLSGIYDNGLCRFVQLGDCGVRASSLLLL
RKIRKWIGFLGGMVARSLLFTCHEHIKKYS*
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