mRNA_Ecto-sp13_S_contig12794.2309.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12794.2309.1
Unique NamemRNA_Ecto-sp13_S_contig12794.2309.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A6H5K1D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D9_9PHAE)

HSP 1 Score: 665 bits (1715), Expect = 6.240e-232
Identity = 372/395 (94.18%), Postives = 373/395 (94.43%), Query Frame = 1
Query:    1 SVSVGFDLDDTPIPIVDLAGYRVRSEDLDRLAPAAGRRSSSNLLRKVLNRRDSSGLFLAGSAGPGXXXXXXXXX--TGRLLPAQDPGRRQLLLQQQQPQLQQLKEDGSXXXXXXXXXXXXXX--------EGEAFISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDVHTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKKGGQPQLFRGTNMEAS 1155
            SVSVGFDLDDTPIPI DLAGYRVRSEDLDRLAPAAGRRSSSNLLRKVLNRRDSSGLFL GS    XXXXXXXXX  TGRLLP QDPGRRQLL +QQQPQLQQLKEDGS   XXXXXXXXXXX        EGEAFISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEK ICEDDVHTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKKGGQPQLFRGTNMEAS
Sbjct:  212 SVSVGFDLDDTPIPIFDLAGYRVRSEDLDRLAPAAGRRSSSNLLRKVLNRRDSSGLFLVGSGXXXXXXXXXXXXXXTGRLLPVQDPGRRQLL-RQQQPQLQQLKEDGSGDGXXXXXXXXXXXXXXXXXXXEGEAFISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKAICEDDVHTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKKGGQPQLFRGTNMEAS 605          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: D7G3E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E7_ECTSI)

HSP 1 Score: 620 bits (1599), Expect = 1.690e-210
Identity = 361/408 (88.48%), Postives = 364/408 (89.22%), Query Frame = 1
Query:    1 SVSVGFDLDDTPIPIVDLAGYRVRSEDLDRLAPAAGRRSSSNLLRKVLNRRDSSGLFLAGSAGPGXXXXXXXXX---TGRLLPAQDPGRRQLLLQQQQPQLQQLKEDGSXXXXXXXXXXXXXXEG-EAFISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDV--HTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGA-----------------VVGGDARDDLATFWLRKTKKPVLAVLLVQKKGGQPQLFRGTNMEAS 1155
            SVSVGFDLDDTPIPI DLAGYRVRSEDLDRLAPAAGRRSSSNLLRKVLNRRDS  L         XXXXXXXXX   TGRLLP QDPG RQLLLQQQ PQLQQLKEDGSXXXXXXXXXXXXXX   EAFISGVYFPLLSVLMPKWMELLA SGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFP+VRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEK ICEDDV  HTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGA                 VVGGD RDDLA+FWLRKTKKPVLAVLLVQKKGG+PQLFRGTNME S
Sbjct:  214 SVSVGFDLDDTPIPIFDLAGYRVRSEDLDRLAPAAGRRSSSNLLRKVLNRRDSXXLXXXXXXXXXXXXXXXXXXXXXTGRLLPVQDPGPRQLLLQQQ-PQLQQLKEDGSXXXXXXXXXXXXXXXXXEAFISGVYFPLLSVLMPKWMELLARSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPTVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKAICEDDVEVHTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGAYTRQAFDAPAGDANGEAVVGGDTRDDLASFWLRKTKKPVLAVLLVQKKGGRPQLFRGTNMEVS 620          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: W7U454_9STRA (Cytidine deaminase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U454_9STRA)

HSP 1 Score: 271 bits (693), Expect = 2.330e-76
Identity = 163/387 (42.12%), Postives = 212/387 (54.78%), Query Frame = 1
Query:   10 VGFDLDDTPIPIVDLAGYRVRSEDLDRLAPAAGRRSSSNLLRKVLNRRDSSGLFLAGSAGPGXXXXXXXXXTGRLLPAQDPGRRQLLLQQQQPQLQQLKEDGSXXXXXXXXXXXXXXEGEAFISGVYFPLLSVLMPKWMELLA---GSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDVHT--FEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKKGGQPQLFRGTNMEAS 1155
            VGFDL + P+P+ DL  +R+R +DL +L P                    S         PG          G +  A++                    D                +    I GVYFPLL+ ++P W + +A   G G + +  K + LVSGVG PR+     E NST+ TA L+E +++R++P VRVVRVHS TNIFRYD+NI FVK ELLPL+   R   AE++G  W+    +T+SFADGSPARIS+INAALR ++PSF+H WELKTFWH   +C +DV    FEDID  PP+P+S  DA   L+  EM R +   E VL    +G         DL+TFWLRKT+KPVLAVLLVQK   +P L+RG NME S
Sbjct:  299 VGFDLSECPLPVQDLTDFRLRRDDLGKLYPPL-----------------PSPRLQPPHPSPGGHDPAVTENAGGMAAAKNDS-----------------VDRDPLAGRSSPRSPAPLQDAVGIDGVYFPLLANVLPTWRKTVAAGVGPGGEEEVFKIIFLVSGVGMPRDPTSSREGNSTQGTAALLEEWMQRNYPDVRVVRVHSTTNIFRYDENIAFVKNELLPLIEHYRDGAAERWGTSWRHKYRLTISFADGSPARISAINAALRPYRPSFMHTWELKTFWHHAKMCLEDVEVLAFEDIDTAPPVPLSHADARARLVAQEMLRYK---EEVLLHYRQGLCA------DLSTFWLRKTEKPVLAVLLVQKDRARPLLYRGCNMEVS 642          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A7R9UFD1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFD1_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.250e-71
Identity = 133/271 (49.08%), Postives = 185/271 (68.27%), Query Frame = 1
Query:  376 ISGVYFPLLSVLMPKWMELLAGSGDDVD-------SSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDVH--TFEDIDMQPPMPVSEVDAPTAL-IIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKKGG-QPQLFRGTNMEAS 1155
            I+GV+FPLL+VL+PKW   +   G   D       + K ++LVSGVG+PRN E R EDNSTEV A+L   F++R  P V+++R+HS TNI+RY +NI FVK ELLPLL   R   A ++G  W++ M +T+SFADGSPAR+++INAALR +KPSF+HIW+L+TFWH + IC DDV   +F ++D  P +P +EVD      +  EM + R+D ++ ++     +   G ++ DL TFW+RK+ K VL+VLL +K GG +P L RGTNME S
Sbjct:  344 IAGVFFPLLAVLLPKWRAFIRDRGAVQDLITGSAQTRKVIVLVSGVGEPRNPEDRKEDNSTEVAAMLASLFIQRLCPDVKIIRLHSKTNIYRYTENIGFVKFELLPLLAEFRDAQAARWGSSWREKMRVTVSFADGSPARVAAINAALRPYKPSFMHIWQLQTFWHARRICLDDVEVLSFAEVDTYPAVPTNEVDDDEMKWVCEEMVKFREDFDKAVSGDDNDSQ--GQSKHDLGTFWMRKSGKVVLSVLLTRKGGGGKPLLHRGTNMEVS 612          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A482RRJ2_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRJ2_9ARCH)

HSP 1 Score: 243 bits (621), Expect = 7.760e-71
Identity = 121/263 (46.01%), Postives = 172/263 (65.40%), Query Frame = 1
Query:  376 ISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDV--HTFEDIDMQPPMPVSEVDAPT-ALIIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKKGGQPQLFRGTNMEAS 1155
            I GV+FPLL+ L+PKW              K V+LVSG GQP++E     DNSTE    L+  FL+R  P ++V  +HS TN+FRYD+NI FVK ELLPL++  R ++ +++  DW+  +H+T+SFADGS AR SSI+A+L+ ++PSF+H W LKTFW E+ +CE+D+  H F++I   P + + ++D P   +++ EM + R+ ++R  +A           + DL  FWLRKTKKPVLAVLLVQK    P L+RG+NME S
Sbjct:  118 IDGVFFPLLATLIPKWERTTQQHSGTAHCQKVVVLVSGKGQPQDERADSSDNSTEFVGKLIALFLQRAHPELQVRLLHSQTNLFRYDENIWFVKRELLPLISGYRDELVQRHSADWRSKVHLTLSFADGSSARTSSIHASLKSYRPSFMHFWVLKTFWRERRVCEEDIEWHGFDEIATNPALSLGDIDDPQLTMVLQEMDKFREAVQRDASAE----------QSDLLRFWLRKTKKPVLAVLLVQKPNQPPSLYRGSNMEVS 370          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A0N7L3D3_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L3D3_PLAHL)

HSP 1 Score: 236 bits (601), Expect = 1.510e-65
Identity = 122/267 (45.69%), Postives = 178/267 (66.67%), Query Frame = 1
Query:  376 ISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDV--HTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKK---GGQPQLF--RGTNMEAS 1155
            I+ VYFPL+++L+PKW ++L     +  S + V L+SG G PRN EH    NSTE+TA L+  F+  ++P +  ++VHS +NIFR+DDN++F+  EL PLL A R  + ++ GE W+   H+T+++ADG PAR+S++NA+LR ++PS++HIW+LKTFWHE+ +   DV  H+FE+I+  P +  SE DA T +I+ EMQ+ RD     L A  +G V G         FWLRK++KPVLAVLL++K    GG+P +   RG N E S
Sbjct:  152 ITAVYFPLVALLLPKWTQVLKEFQSE-SSRQLVYLISGAGIPRNVEHSHSSNSTEITAQLIVLFVHEYYPQMTAIQVHSGSNIFRFDDNVQFMTRELRPLLEAHRETLVDRCGEAWRSHFHVTIAYADGPPARLSALNASLRMYRPSYLHIWQLKTFWHERKLSMVDVDFHSFENIEASPLVVPSEADAMTQMIVNEMQQFRDQF---LEAEGQGEVAG---------FWLRKSRKPVLAVLLIEKPAIDGGRPTIVMQRGMNCEVS 405          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: W2PRR7_PHYPN (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2PRR7_PHYPN)

HSP 1 Score: 234 bits (598), Expect = 6.150e-65
Identity = 121/268 (45.15%), Postives = 178/268 (66.42%), Query Frame = 1
Query:  376 ISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDV--HTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKK----GGQPQLF--RGTNMEAS 1155
            I+ VYFPL+++L+PKW ++L     +  S + V L+SG G PRN EH    NSTE+TA L+  F+ +++P +  ++VHS +NIFR+DDN++F+  EL PLL A R  + ++ GE W+   H+T+++ADG PAR+S++NA+LR + PS++HIW+LKTFWHE+ +   DV  H+FE+I+  P +  S+ DA T +I+ EM++ RD     LAA   G V G         FWLRK++KPVLAVLL++K     GG+P +   RG N E S
Sbjct:  185 ITAVYFPLVALLLPKWTQVLKEFQSE-SSRQLVYLISGAGIPRNVEHSRSGNSTEITAQLIVLFVHQYYPHMTAIQVHSGSNIFRFDDNVQFMTRELRPLLEAHRETLVDRCGEAWKSHFHVTIAYADGPPARLSALNASLRMYSPSYLHIWQLKTFWHERKLSMADVDFHSFENIEASPLVAPSKADAMTQMIVREMRKFRDQF---LAAEGEGEVAG---------FWLRKSRKPVLAVLLIEKPAAELGGRPTIVVQRGMNCEVS 439          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A3M6VVK1_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVK1_9STRA)

HSP 1 Score: 234 bits (598), Expect = 6.780e-65
Identity = 116/268 (43.28%), Postives = 180/268 (67.16%), Query Frame = 1
Query:  376 ISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDV--HTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKK----GGQPQLF--RGTNMEAS 1155
            I+ VYFPL+++L+PKWM++L     + +S + V L+SG G PRN EH   DNSTE+TA L+  F+ +++P +  ++VHS +NIFR+DDN++F+  EL PLL A+R  + ++ GE W+   H+T+++ADG PAR+S++NA+LR ++PS++HIW+LKTFWHE+ +   DV  H+FE I+  P +  S+ DA T +++ EM+  RD              +  +   ++A+FWLRK++KPVLAVLL++K     G +P +   RG N E S
Sbjct:  165 ITAVYFPLVALLLPKWMQVLKEFQSE-NSRQLVYLISGAGIPRNVEHSRNDNSTEITAQLIALFVHQYYPHMTAIQVHSGSNIFRFDDNVQFMTRELRPLLEAQRETLVDRCGEAWKSHFHVTIAYADGPPARLSALNASLRIYRPSYLHIWQLKTFWHERKLSMVDVDFHSFEKIEASPLVAPSKADAMTQMVVREMRMFRDQF------------LSAEGEGEVASFWLRKSRKPVLAVLLIEKPATVAGERPTIVVQRGMNCEVS 419          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A7S2WW95_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW95_9STRA)

HSP 1 Score: 232 bits (591), Expect = 4.570e-64
Identity = 127/281 (45.20%), Postives = 177/281 (62.99%), Query Frame = 1
Query:  376 ISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDVH--TFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVL--------AAPPR----------GAVVGGDARDDLATFWLRKTKKPVLAVLLVQKKGG-QPQLFRGTNMEAS 1155
            ISGVYFPLL+ ++P+W++ L  S    D+ K V LVSGVG PR+E      NSTE  + L+E +L  H+P + V RVHSDTN+FRYD+NI FVK ELLP +   R  +A K G  W+D   +T+SFA GSPARI++I +ALR ++P F+H+W+LKTFWHE TIC DD+   + ED++  P +P  + D    L+   ++ L+   + V+        ++P R          G V+      D+A FW RK++K VL+VLLV K+G  QP+L+ GTNME S
Sbjct:  102 ISGVYFPLLATIIPRWLQALRESRAQ-DAWKIVYLVSGVGVPRDESADPGQNSTEGVSELLEMWLLTHYPGITVRRVHSDTNLFRYDENIAFVKRELLPEIEPIRDALACKLGSAWRDNFKLTVSFASGSPARITAIQSALRPYRPMFMHMWQLKTFWHESTICLDDIEFMSSEDVETLPAVPTEQTDPHVQLVAQRIKELKQQFDAVVTGSGGAQASSPLRQFFPDTSSSDGPVLCSPVGHDMAKFWHRKSRKVVLSVLLVLKEGETQPRLYAGTNMEVS 381          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A1V9Z9N5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9N5_9STRA)

HSP 1 Score: 229 bits (584), Expect = 5.060e-64
Identity = 119/267 (44.57%), Postives = 170/267 (63.67%), Query Frame = 1
Query:  376 ISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKTICEDDV--HTFEDIDMQPPMPVSEVDAPTA-LIIAEMQRLRDDLERVLAAPPRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKKGGQPQL----FRGTNMEAS 1155
            IS V+ PLL  L+PKW ++LA      DS + + L+SG G PRN  H +  NSTE TA LM  F++ ++P + + RVHS +NIFRYDDN++F+  EL PLL A R  + +K G+ W+   H+T+S+ADG PAR+S++NAALR + PS++H+W+LKTFWHE  +  DDV  H FEDI+  P + +++V  P    ++AEM+  RD              V G    ++ +FWLRK++KPVLA+LL+QK+    +L     RG N E S
Sbjct:  113 ISAVFLPLLGSLVPKWEQVLAEVYSQ-DSQQLLYLISGAGIPRNAAHSICGNSTEFTASLMTQFVRAYYPKIHITRVHSGSNIFRYDDNVQFMTRELRPLLEAHRDTLVQKVGDSWKSHFHLTISYADGPPARLSALNAALRVYTPSYLHLWQLKTFWHESKLSLDDVDFHPFEDIEATPAISLADVKEPLVERLVAEMKAFRD------------CFVQGQHLGEVGSFWLRKSRKPVLAILLIQKRLPTGELTTVVHRGMNCEVS 366          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1D9_9PHAE6.240e-23294.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3E7_ECTSI1.690e-21088.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7U454_9STRA2.330e-7642.12Cytidine deaminase-like protein n=2 Tax=Monodopsid... [more]
A0A7R9UFD1_9STRA1.250e-7149.08Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A482RRJ2_9ARCH7.760e-7146.01Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A0N7L3D3_PLAHL1.510e-6545.69Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
W2PRR7_PHYPN6.150e-6545.15Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A3M6VVK1_9STRA6.780e-6543.28Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A7S2WW95_9STRA4.570e-6445.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1V9Z9N5_9STRA5.060e-6444.57Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12794contigEcto-sp13_S_contig12794:62..4931 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score169.5
Seed ortholog evalue9.2e-40
Seed eggNOG ortholog2880.D7G3E7
Model size1892
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.A distinct subfamily of CDD/CDA-like deaminases
EggNOG OGs293GQ@1,2RADN@2759
Cds size342
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12794.2309.1prot_Ecto-sp13_S_contig12794.2309.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12794 4590..4931 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462684.3271906-UTR-Ecto-sp13_S_contig12794:61..6011681462684.3271906-UTR-Ecto-sp13_S_contig12794:61..601Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12794 62..601 +
1681462684.3433077-UTR-Ecto-sp13_S_contig12794:1264..13531681462684.3433077-UTR-Ecto-sp13_S_contig12794:1264..1353Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12794 1265..1353 +
1681462684.3526042-UTR-Ecto-sp13_S_contig12794:1616..17131681462684.3526042-UTR-Ecto-sp13_S_contig12794:1616..1713Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12794 1617..1713 +
1681462684.3600707-UTR-Ecto-sp13_S_contig12794:2019..21691681462684.3600707-UTR-Ecto-sp13_S_contig12794:2019..2169Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12794 2020..2169 +
1681462684.3678627-UTR-Ecto-sp13_S_contig12794:3065..32041681462684.3678627-UTR-Ecto-sp13_S_contig12794:3065..3204Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12794 3066..3204 +
1681462684.375698-UTR-Ecto-sp13_S_contig12794:4054..45891681462684.375698-UTR-Ecto-sp13_S_contig12794:4054..4589Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig12794 4055..4589 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462684.3836036-CDS-Ecto-sp13_S_contig12794:4589..49311681462684.3836036-CDS-Ecto-sp13_S_contig12794:4589..4931Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12794 4590..4931 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12794.2309.1

>prot_Ecto-sp13_S_contig12794.2309.1 ID=prot_Ecto-sp13_S_contig12794.2309.1|Name=mRNA_Ecto-sp13_S_contig12794.2309.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSVAHLGGAPASIATAA
AAVAIDGRKEGASLPGVKAVDSGGGQSGRLGAAGLGLAVGSSVATSCAPS
PLSLTPAMKVSPKT
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mRNA from alignment at Ecto-sp13_S_contig12794:62..4931+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12794.2309.1 ID=mRNA_Ecto-sp13_S_contig12794.2309.1|Name=mRNA_Ecto-sp13_S_contig12794.2309.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12794:62..4931+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCGTGTCCGTCGGGTTCGACCTGGACGACACCCCGATACCGATCGTCGA CCTGGCCGGCTACCGCGTCCGCAGCGAGGACCTAGACCGCCTCGCCCCCG CCGCCGGCCGCCGGAGCTCCTCGAACCTCTTGCGCAAGGTCCTGAACAGG AGGGATTCTTCTGGGCTGTTCCTGGCCGGCAGCGCCGGCCCCGGCGCTGG CGGTAGCGGCGGTGGCGGTGGAACCGGTAGATTACTCCCCGCGCAAGATC CCGGACGAAGGCAGCTGCTGCTGCAGCAGCAGCAGCCCCAGCTGCAGCAG CTGAAGGAAGACGGGAGTGGGGACGGGGGATGCGGCGGCGGCGGCGGCGG GGGGAATGGCGAAGGGGAAGCGTTCATCAGCGGGGTGTACTTCCCGCTGC TGTCCGTCCTCATGCCCAAGTGGATGGAGCTCCTGGCCGGGAGCGGGGAC GACGTGGATTCGTCCAAGACGGTACTGCTCGTTAGCGGCGTGGGACAGCC CCGCAACGAGGAGCACCGGCTGGAGGACAACTCCACCGAGGTGAGACGAG CAAGGTTTCGCCGTCTTGTTTCTGCCACGTTTCACGCCCGACGAAACGTT TCCTGTCTTGTTGGCGTCTTGCGGCCGCCGTTGACTGCAGCCTGGCGAAC AGCGGCGGTACTTGCTCTTTTGTCCCGGGAGCTTCTTGCCGTCCGTTGCG CATCATCCGCCTCTTGGTGTCTTCTTGCTCCGGGTGGTCCGTGCCCTCCC GGTGCTGACTCGCGTCCTCCTCCTACGCTGCCGGCACTGGTGGTTCCTTC GCGCCCTCTTTCTCCTCCCCCGAGTGCTGTCACTGCTGTCTACCCTCTCC CAAAACGATCGCTTGCCCCGATGTCGTCCGTGAGTAGTGGTAGAGCTGAA GGCCGCATGGAGTGTGCTCCCGGTTGAAATCAAGCCGTGTGCTATTACTC AAGTTGTCGAACCCCTTCTTGTCATGCCCTTTCCCTTTCCCTGGGATGTC CCTTGTGCGACTAGGGAAGGAGCACAGTGTGGCATAGATAACACTAAATG CGGCTAAAATCCACTAGATAGCGACAGCTTGAACGATGAGTGACATCTGC TCTGCTACGTTCCCTCACGACCATCTCCACGCGTTTGTGTTTCTCTATGT CGTGTGATGGCGCGTTAAAATATCTCGGTTACGTTACGACATCACGGGCA CAGGTGACAGCGGTCCTGATGGAGGCGTTCTTGAAGAGGCACTTCCCCAG CGTGCGCGTCGTACGAGTGCACTCCGACACGAATATTTTCAGGTGTGTGA ATGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGCTGTT GCTGTTTTGTTTTGTTGTTTGTCCTTTCGTGATCTAAACTTCCAGCGGTA GGATCGTCTGCCTCTCACCGCGAATGCTTACATATCGGCAGTTAAAATCA TCCTCGAAACGGCCACGTTTCGTGTGCCTCTCTGCATAGTCTAAACAACA TGTGTGTTTCGTTCATGCTATGCTCCCGGGTGACATGGTTCTTGAAATGG ATCAGGTATGACGACAACATCCGCTTCGTGAAGACGGAGCTGTTACCCCT GCTCAACGCCGAGCGCAGCCAAATGGCGGAAAAATACGGAGAGGACTGGC AGGTTTGGTGGTTCTGTTGTCATAGCATTGCTTGTCATGCTGTTCTTGCT GCCGTACTCGTAGCTCGTGCTGTAGTCCTCCCCACTGTTTTTGACTCTCC CTTTGTCTCTGTCTGTCTGTCTATCTGTCTATCTGTCTGTCTGTCTGTCT CTGTCTCTGTCCGTCTCTGTCTGTCTTCCTCCCTCTCCCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCT CTCTTTCTCTCTCTCTCTTTCTCTCTTTTTCTTTTTTTTTTTCTCTCGTG CGCGAAAGGACATGATGCACATCACCATGAGCTTCGCGGACGGTTCGCCG GCGCGCATTTCCTCCATCAACGCCGCCCTCCGGCATTTCAAGCCTTCTTT CATCCACATCTGGGAGCTCAAAACCTTCTGGCACGAAAAGACCATCTGCG AGGACGACGTGGAGGCGAGTCCATGATATACCTTTTTTTGACTCCGATCC CCCAACCGTTCCGTGTTTCTTTTTTATTGCCCCGCAAGACCTTCTCCACA ATGTTTTCTTCTCACACTAGAATACTGTTTTTTTGTTATATTTTCTGCGG GGACGACGACGTCCGAGGGATTTTTCCTCCGAGGCCTGGCGCAAGGATGT GATGATTCTGTCACCGCCAGGGGGTTTCAATGTAGGGTGTACGAAGCACT CGTAGAAGGTACCATCTCCCTCCGTGTGCCACCGTCGAACAGGGACATCT TGCACGCAATGTTCAACTTTGTTTGCGGGTGTGCGCATCGTATCGCGTAT CGTCCCCTGGGTTGCCTTGTGCCGCAGCACGTCCGTTGCAATGAACACGC TGCCGTTGTTGGGCGTTTTTGGGGCCCCCAAGAGGAACTAGAAATATTGC CATGGGGGTCCTTTGTTCTCCGTTGAATACCGGTTGTGAAAGTGGTGCTG AGGAAGCGAAATTTGTGGACCCATGAAACAAAAATGAAGCAGCTGTGTCG GCAGGCCCCACATTTAGCACAGCTATGTAGCAGTGCGTGAGAAAATGTGG GTCAGGTATTCAACAACGTTTCCCCCTTCGGACTAACAATCGCTCGACGG CAGTGTTCGGTTGCGCGTCGTCCCGCGCCCGCCCACCTCCCTCGGCCTCC TCAGAAATTCAACCTGCGACGCTTACGGCCTTGCGAGGCATTCGTGCCCA CACAGGGCGCACGCCAGCAGCTCTACATCGAGCTAGCCCATCACCGTGTG TGTTCGCAGCACAGGGATGATCCACACCGATTGGCTGATGGCGACGAGAA GCCACCCCACATTTCCACGTGACCTGCTACTTTTGTTGTTGTTTGTTTGT CCAGGTGCACACGTTCGAGGACATCGACATGCAGCCCCCGATGCCGGTCT CGGAAGTGGACGCTCCGACGGCCCTGATCATCGCCGAGATGCAACGCCTC AGGGACGACCTGGAACGGGTTCTTGCGGCACCCCCCCGAGGAGGTACCGC TCATTCTCCTCCGCGTCTCCCCTCCCCGCCGCGGGCAGCGCGCTTGCATG TTGTTGTAGGAGGCGTGTTTTGTTCCGCTCGCCGACAACAACACTTGTTC TCTCTGCGGACGGAGAGAGCGTGAGATGAGAGTGTTTTGCCAAGCAGCAG GCGGCGATGTGCGTTCGCTCTGTCGGGAGGAATGTTTGGGTGTTATTGTT GTTGTTGCTGTTGCTGTTGCTGTTAGTAGTGTTTCGTGCTTTTTGTCTGG TCCTCGCTGTCGTGAGCGGCGGCCTACGCCTTTCGGTAAGCGTTCGACGC ACCAACTTGGGGTGAACAAGAGGAAGATAAATGCGCGTCATCCTTGTATT TTCTCCCGCTGTTCTCCGGGGGTGCTTTGCCTTGAAAATTTATGGACTTT CACGCGAGAGGGGTTGAGCAGCAGCCCCTTCCCCTTTTTGTTGGGTGCCG AGGGCACTATGCGCTGCTCACTCCAGAAGTTGCGAGGTTTTGAAGCTTGA GAGATGTGAATCCACCAACACAGAGCTGAAAGGACATTTTACGAGACACA AGTGCCAAGTTCACACCGCTCAGCCTGACCGAGCTCGATGGGTGATGGCG TTTTTTTGTTGCCTCTTCTCTCCACCGTGGTGTGTGTGTTTTCCCGGAGA TGTCTGTGATACCCATGTCTCGTCATGTATGCTATCCATGTCTCTTGTCG TCACGGCTAGGGTCTGTAGTCGTCGTTTTACTGATCCAGCGCTCTCGTGT TTAATGGGGTCTACTTCTGTGTCTCCTTCTTTGTCTCCTTCTGTGTCTTC TGTGTCTTCTTGCTTGCTGCTGGTGTGGGCGGCGTAAAAAAAGCCGTGGT TGGTGGCGACGCGAGAGACGACCTGGCGACCTTCTGGCTGAGGAAGACGA AGAAGCCTGTTCTTGCGGTTCTCCTTGTGCAGAAGAAAGGAGGCCAGCCC CAGCTCTTCCGCGGAACAAACATGGAGGCGAGTTAAAAAATGATGTAGGC ATCATACTTTTTGTCGACGACCGTCGTCAGGAAGCCACCCCGGCTCTCTT CCCGCCCCGCGCTCCCTCCGCTGTTTGACGTCGACCACGGCCTTCGTTCG TTACAGCCACAACAGTGTCGTTCTAGCAGAGGAAAATTCGCTCGGTAATT CTGTTGTTTGTGACCATGGTTCGGAGCGCTCCTACGCGGCGGACCCATCG TATTGTACAGTGAGCGCTGAAAAAAAGTGACGGGAAAAAACAATGGTCTG AGGCCTGTACGCCCCTCACTCTCCGATTTCCGCCGCATTCCCCCCCGCGG CACGCCGTGCACGCGTGAAAACGCTATAATTCGTTCGTGCCGCGGGATAA ACACCCACCCACAACAAAAAAGGTTTCGATGCCAACGGGATCGCTGTGCG CCGAGCGTAACGTCATCGGCTCCGCCCTCACCTCCGACCTGAGCCTCCTC CGGAGAGACATCAAGGCGGTCGCCGTGCTGTCCGTGGCCCACCTGGGCGG AGCTCCCGCCTCTATCGCCACCGCCGCGGCTGCTGTTGCCATCGATGGAA GAAAAGAAGGCGCTTCGTTGCCTGGTGTCAAGGCTGTCGATAGCGGCGGC GGGCAGAGCGGGCGGCTAGGGGCCGCCGGATTGGGGTTAGCAGTGGGGTC CTCCGTAGCAACGTCGTGCGCACCGTCGCCGCTTTCCCTGACGCCGGCGA TGAAGGTGTCCCCTAAGACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12794:62..4931+

>mRNA_Ecto-sp13_S_contig12794.2309.1 ID=mRNA_Ecto-sp13_S_contig12794.2309.1|Name=mRNA_Ecto-sp13_S_contig12794.2309.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=342bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12794:62..4931+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCAACGGGATCGCTGTGCGCCGAGCGTAACGTCATCGGCTCCGCCCT
CACCTCCGACCTGAGCCTCCTCCGGAGAGACATCAAGGCGGTCGCCGTGC
TGTCCGTGGCCCACCTGGGCGGAGCTCCCGCCTCTATCGCCACCGCCGCG
GCTGCTGTTGCCATCGATGGAAGAAAAGAAGGCGCTTCGTTGCCTGGTGT
CAAGGCTGTCGATAGCGGCGGCGGGCAGAGCGGGCGGCTAGGGGCCGCCG
GATTGGGGTTAGCAGTGGGGTCCTCCGTAGCAACGTCGTGCGCACCGTCG
CCGCTTTCCCTGACGCCGGCGATGAAGGTGTCCCCTAAGACC
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