prot_Ecto-sp13_S_contig12794.2309.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12794.2309.1
Unique Nameprot_Ecto-sp13_S_contig12794.2309.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length114
Homology
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: D7G3E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E7_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 7.250e-46
Identity = 98/113 (86.73%), Postives = 102/113 (90.27%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSVAHLGGAPASIATAAAAVAIDGRKEGASLPGVKAVDSGGGQSGRLGAAGLGLAVGSSVATSCAPSPLSLTPAMKVSPK 113
            MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSVAHLGG PAS AT AAAV ID RKEGASL G+ AVDSGGG+SG  GAAG+G AVGSS+ TSCAPSPLSLTPAMKVSPK
Sbjct:  621 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSVAHLGGPPASTATTAAAVPIDERKEGASLTGITAVDSGGGRSGWPGAAGMGSAVGSSLTTSCAPSPLSLTPAMKVSPK 733          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: W7U454_9STRA (Cytidine deaminase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U454_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.280e-7
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSV 36
            MPTGSLCAERN IGSAL +DL+L RRD+K VAVLSV
Sbjct:  643 MPTGSLCAERNAIGSALAADLTLKRRDLKVVAVLSV 678          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A662WMZ3_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMZ3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.990e-7
Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSVAHLGGAPASIATAAAAVAIDGRK-EGASLPGVKAVDSGGGQS 77
            MPTGSLCAERN IGSAL SD +L RR +K + VL + +LG      AT   +VA++G + E  S  G KAV+S  G S
Sbjct:   85 MPTGSLCAERNAIGSALASDPTLTRRALKMIGVLGL-NLGAGGEKPATTPTSVAMNGNEGEAGSQVGQKAVESSAGLS 161          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A835Z834_9STRA (A distinct subfamily of CDD/CDA-like deaminases-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z834_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.940e-7
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSV 36
            MPTGSLCAERNVIG+AL  DLSL RRD++ VAVL+V
Sbjct:  145 MPTGSLCAERNVIGTALADDLSLCRRDLRMVAVLAV 180          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A024TN09_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN09_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.470e-6
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSVAHLGGAPASIATAAAA 52
            MPTGSLCAERN IGSAL +D +LLR+ +K +AVLSV  L   P  +A A+AA
Sbjct:  383 MPTGSLCAERNAIGSALANDPTLLRQSLKMIAVLSVT-LHSHPKQVAMASAA 433          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A7S2ES86_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ES86_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.070e-6
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSV 36
            MPTGSLCAERNVIG+AL SD SL R D+K VAVL+V
Sbjct:  360 MPTGSLCAERNVIGTALASDPSLKREDLKMVAVLAV 395          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A3L6UXB0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UXB0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.310e-6
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSV 36
            MPTGSLCAERN IGSAL +D +LLR+ +K +AVLSV
Sbjct:   47 MPTGSLCAERNAIGSALANDPTLLRQSLKMIAVLSV 82          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A5D6Y6H5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.770e-6
Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSVAHLGGAPASIA 47
            MPTGSLCAERN IGSAL SD +L RR +K + VLS+ +LG  PA+ A
Sbjct:  369 MPTGSLCAERNAIGSALASDPTLKRRAMKMIGVLSL-NLGATPAAAA 414          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: K0SZS5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZS5_THAOC)

HSP 1 Score: 54.7 bits (130), Expect = 2.860e-6
Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSV 36
            MPTGSLCAERNVIG+AL SD  L R D+K VAVLSV
Sbjct:  637 MPTGSLCAERNVIGTALASDPGLKREDLKMVAVLSV 672          
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Match: A0A397C3P7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C3P7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.300e-6
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLS 35
            MPTGSLCAERN IGSAL +D +LLR+ +K +AVLS
Sbjct:   47 MPTGSLCAERNAIGSALANDPTLLRQSLKMIAVLS 81          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12794.2309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3E7_ECTSI7.250e-4686.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7U454_9STRA1.280e-780.56Cytidine deaminase-like protein n=2 Tax=Monodopsid... [more]
A0A662WMZ3_9STRA1.990e-751.28Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A835Z834_9STRA2.940e-777.78A distinct subfamily of CDD/CDA-like deaminases-do... [more]
A0A024TN09_9STRA1.470e-661.54Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S2ES86_9STRA2.070e-677.78Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A3L6UXB0_9STRA2.310e-672.22Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A5D6Y6H5_9STRA2.770e-663.83Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K0SZS5_THAOC2.860e-677.78Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A397C3P7_9STRA3.300e-671.43Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032723Deaminase, LmjF36.5940-likePFAMPF14421LmjF365940-deamcoord: 1..76
e-value: 8.2E-20
score: 71.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12794contigEcto-sp13_S_contig12794:4590..4931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12794.2309.1mRNA_Ecto-sp13_S_contig12794.2309.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12794 62..4931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12794.2309.1 ID=prot_Ecto-sp13_S_contig12794.2309.1|Name=mRNA_Ecto-sp13_S_contig12794.2309.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
MPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSVAHLGGAPASIATAA
AAVAIDGRKEGASLPGVKAVDSGGGQSGRLGAAGLGLAVGSSVATSCAPS
PLSLTPAMKVSPKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032723Deaminase_LmjF365940