mRNA_Ecto-sp13_S_contig1279.2304.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: D7FTX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX6_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 3.610e-157 Identity = 227/241 (94.19%), Postives = 231/241 (95.85%), Query Frame = 1
Query: 1 GVLIPRSMPQLSALPALASVEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFRGDLRAAAKRLPTLFWLLPPEAALDPWLKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGA--AGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
GVLIPRSMPQLSALPALAS EPSSYWLTRSLFLRCLGGVF+VAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGF+GDLRAAAKRLPTLFWLLPPEAALDPWLKRTA +GLSLSILVTLLGAANLPIILALWVLYHTLANVGQHW YGFGWENQLLETAFLTAFAVPLLSLQPFPA CPPPAVIPWLYKWLAFR+MFGA AGLIKIRGDKVWKDLTA DYHYETQPLPNPISYFLHQ
Sbjct: 3 GVLIPRSMPQLSALPALASAEPSSYWLTRSLFLRCLGGVFSVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFKGDLRAAAKRLPTLFWLLPPEAALDPWLKRTAVIGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHW--YGFGWENQLLETAFLTAFAVPLLSLQPFPATCPPPAVIPWLYKWLAFRIMFGAFERRAGLIKIRGDKVWKDLTAMDYHYETQPLPNPISYFLHQ 241
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: A0A5B7DZE5_PORTR (Lipase maturation factor n=4 Tax=Portunidae TaxID=6757 RepID=A0A5B7DZE5_PORTR) HSP 1 Score: 237 bits (604), Expect = 1.960e-70 Identity = 122/224 (54.46%), Postives = 156/224 (69.64%), Query Frame = 1
Query: 52 ASVEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFRGDLRAAAKRLPTLFWLLPP--EAALDPWLKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGAAGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
A++ P SYWLTR ++LR L ++AVAF VAL QN LIGD+G+ P K+Y++ V + D K PTL WL P A++DPWL A GL+L+ +V LLGAAN+ I+LALW+LYH+L VGQ W YGFGWE+QLLET L + VPLLSL+ P + PPP V+ W +WL FR+M GA GLIK+RGD W DLT +YHY+TQP+PNP+SY+LHQ
Sbjct: 136 ATLLPDSYWLTRIVYLRFLAFIYAVAFLVALHQNKQLIGDNGLLPVKNYMQLVAKRA-GSDWWERIKAAPTLLWLAEPWTTASVDPWLDLIAGAGLTLACVVLLLGAANVFIMLALWILYHSLVAVGQQW--YGFGWESQLLETGLLGVWGVPLLSLRRLPTSSPPPLVLVWGLRWLIFRIMMGA---GLIKVRGDPCWMDLTCMNYHYQTQPVPNPMSYYLHQ 353
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: A0A6P5A459_BRABE (Lipase maturation factor n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5A459_BRABE) HSP 1 Score: 228 bits (582), Expect = 5.680e-68 Identity = 113/220 (51.36%), Postives = 149/220 (67.73%), Query Frame = 1
Query: 58 VEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFRGDLRAAAKRLPTLFWLLPPEAALDPWLKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGAAGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
+E +YWLTR +FLR LG ++ VAF VAL QN L+G G+ PA YL+RV ++ ++ +P+L W + E LD WL R A LG +LS +V + G AN+ ++ ALW LYH++ N+GQ W Y FGWE+QLLET FL F PLL+L P P PP V+ W Y+WL FR+M GA GLIKIRGD+ W+DLT +YHY+TQP+PNP+SY+LHQ
Sbjct: 59 LETGTYWLTRIVFLRSLGLIYFVAFLVALHQNKQLLGTDGLLPAHLYLQRVQQHAAADPTQSTWSLVPSLLWWVDWERDLDLWLDRLAYLGAALSFIVMVTGCANMVMMAALWALYHSIVNIGQRW--YSFGWESQLLETGFLAIFFCPLLTLHPLPRRTPPSLVVIWGYRWLIFRIMLGA---GLIKIRGDQCWRDLTCMNYHYQTQPVPNPLSYYLHQ 273
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: A0A1S3H7P2_LINUN (Lipase maturation factor n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H7P2_LINUN) HSP 1 Score: 224 bits (572), Expect = 1.380e-66 Identity = 117/230 (50.87%), Postives = 152/230 (66.09%), Query Frame = 1
Query: 28 QLSALPALASVEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFRGDLRAAAKRLPTLFWLLPPEAALDPWLKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGAAGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
+LS + +E SYWLTR FLR LG ++AVAF V QN LIG G+ PA ++LK++ + G L + PTL W + E +D +L + GL LS+L+ +LG+AN+ ++ LWVLYH+L NVGQ W Y FGWE+QLLE+ FL F PLLSL+P P PP + W Y+WL FR+M GA GLIKIRGD+ W+DLT +YHYETQP+PNPISY+LHQ
Sbjct: 35 ELSDMKITLQLEAGSYWLTRIFFLRFLGFIYAVAFLVGYHQNIQLIGQKGLLPAANHLKKIWSHT-GGSLFQSLNYAPTLLWFVNYEDHMDLYLTAISLCGLMLSLLLVVLGSANMLMMSVLWVLYHSLVNVGQRW--YSFGWESQLLESGFLAIFFCPLLSLRPVPRKTPPSWAVIWGYRWLIFRIMLGA---GLIKIRGDQCWRDLTCMNYHYETQPVPNPISYYLHQ 258
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: UPI0014038EC0 (lipase maturation factor 1 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014038EC0) HSP 1 Score: 224 bits (571), Expect = 1.860e-66 Identity = 119/223 (53.36%), Postives = 149/223 (66.82%), Query Frame = 1
Query: 58 VEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLR--NGFRGDLRAAAKRLPTLFWLLPPEAALDPW-LKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGAAGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
+ P S W TR L LR L ++ VAFSVAL QN ALIGD+G+ PA YL+R+LR G L+A A R PTL WL E + W L A GL+L+ V L G AN+ ++ ALW+LYH+L VGQ W Y FGWE+QLLET FL F PLLSL+ +P PP ++ W + WL FR+M GA GLIKIRGDK W+DLT DYHYETQP+PNP++Y++H+
Sbjct: 45 LRPGSLWATRELLLRALALIYVVAFSVALHQNRALIGDNGLLPASLYLRRMLRYVGGGPVGLQAVA-RAPTLLWLALDEVSSLDWALDAVACAGLALAAFVALTGRANMIVMAALWMLYHSLVAVGQIW--YSFGWESQLLETGFLAIFLCPLLSLKQYPRGSPPSRIVIWAFLWLIFRIMLGA---GLIKIRGDKCWRDLTCMDYHYETQPVPNPVAYYMHR 261
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: UPI0018D7266A (lipase maturation factor 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7266A) HSP 1 Score: 225 bits (573), Expect = 3.090e-66 Identity = 115/221 (52.04%), Postives = 151/221 (68.33%), Query Frame = 1
Query: 58 VEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFRGDLRAAAKRL-PTLFWLLPPEAALDPWLKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGAAGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
+EP+SYWLTR +FLR L ++ AF VAL QN L+G G+ P + YL R+ +N G++ A PT+ W + E A+D WL A G++LS V +LG+AN+ +++ LW+LYH+L +VGQ W Y FGWE+QLLET FL F PLLSL+ +P P P V W Y+WL FR+M GA GLIKIRGD+ W+DLT +YHYETQP+PNPISY+LHQ
Sbjct: 91 LEPNSYWLTRIVFLRSLAFIYLTAFLVALHQNKQLMGRDGLLPTRLYLDRI-KNYVGGEVNVQALSFAPTILWFVDVEGAVDYWLDALAYAGVALSGFVLVLGSANMVVMVMLWLLYHSLVSVGQRW--YSFGWESQLLETGFLAIFMCPLLSLRQYPRRTPTPWVTLWGYRWLIFRIMIGA---GLIKIRGDQCWRDLTCMNYHYETQPVPNPISYYLHQ 305
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: A0A8B7YM60_ACAPL (Lipase maturation factor n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YM60_ACAPL) HSP 1 Score: 223 bits (568), Expect = 7.740e-66 Identity = 116/221 (52.49%), Postives = 145/221 (65.61%), Query Frame = 1
Query: 58 VEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFRGDLRAAAKRL-PTLFWLLPPEAALDPWLKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGAAGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
+EP SYWLTR +FLR L V+ AF VAL QN L G G+ P + YL R+ +N G + A PT+ W + E +D WL A G++LS LV LLG+AN+ ++ LW+LYH+L VGQ W Y FGWE+QLLET FL F PL SL+ FP P P V W Y+WL FR+M GA GLIKIRGD+ W++LT +YHYETQP+PNPISY+LHQ
Sbjct: 50 LEPHSYWLTRIVFLRSLAFVYLTAFLVALHQNKQLFGQDGLLPTRLYLDRI-KNYVGGTVNTQALSFAPTVLWFVDTEGTVDYWLDVLAYAGIALSALVLLLGSANMVVMATLWLLYHSLVGVGQKW--YSFGWESQLLETGFLAIFMCPLFSLRQFPRRTPTPLVTLWGYRWLIFRIMIGA---GLIKIRGDECWRNLTCMNYHYETQPVPNPISYYLHQ 264
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: K1QJR5_CRAGI (Lipase maturation factor n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QJR5_CRAGI) HSP 1 Score: 222 bits (565), Expect = 1.180e-65 Identity = 110/221 (49.77%), Postives = 152/221 (68.78%), Query Frame = 1
Query: 55 SVEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFRGDLRAAAKRLPTLFWLLPPEAALDPWLKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGAAGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
++E +++WLTR + LR +G ++ VAF VAL QN L G HG+ PA+ +LKR+ +G R+P+L WL+ E +LD +L TA GL+LS+ V ++G AN I+LALW LYH++ NVG W YGFGWE+Q+LET FL F P+ +++P P P ++ W ++WL FR+M GA GLIKIRGD+ W+DLT +YHYETQP+PNPISYF+HQ
Sbjct: 39 TLETNTFWLTRIVLLRYIGFIYFVAFLVALHQNKELCGQHGLIPAQKFLKRIQTES-KGSTLELFTRVPSLVWLIDYENSLDSFLDYTAWAGLALSLFVIVVGGANWFIMLALWTLYHSIVNVGSTW--YGFGWESQILETGFLATFLCPVWNVRPVPEDTPTSKIVIWGFRWLIFRIMIGA---GLIKIRGDQCWRDLTCMNYHYETQPVPNPISYFMHQ 253
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: UPI001BB26A20 (lipase maturation factor 1-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB26A20) HSP 1 Score: 220 bits (561), Expect = 9.330e-65 Identity = 119/221 (53.85%), Postives = 146/221 (66.06%), Query Frame = 1
Query: 67 SSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFRGDL----RAAAKRLPTLFWLLPPEAALDPWLKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGAAGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
+SYWLTR +FLR L V+ VAF VAL QN AL+G G+ P YL R+ RN + R A PTL W + + LD WL A GL LS LV +LG +N+ I+++LWVLYH+L N+GQ W Y FGWE+QLLET FL F PLL+L FP P P V W YKWL FR+M GA GLIKIRGD+ W+DLT +YHYETQP+PNP+SY++HQ
Sbjct: 54 NSYWLTRIVFLRSLSFVYFVAFLVALHQNRALLGQKGLLPTSLYLDRI-RNYVKAPSGQVNREAVNFAPTLLWFVDLDQHLDWWLDALAYSGLILSGLVLVLGCSNMLIMMSLWVLYHSLVNIGQRW--YSFGWESQLLETGFLAVFMCPLLTLTRFPRHTPTPWVTLWGYKWLIFRIMIGA---GLIKIRGDQCWRDLTCMNYHYETQPVPNPMSYYMHQ 268
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Match: A0A2G8KKP9_STIJA (Lipase maturation factor n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KKP9_STIJA) HSP 1 Score: 219 bits (557), Expect = 2.800e-64 Identity = 112/221 (50.68%), Postives = 152/221 (68.78%), Query Frame = 1
Query: 58 VEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDHGVTPAKDYLKRVLRNGFRGDL-RAAAKRLPTLFWLLPPEAALDPWLKRTAALGLSLSILVTLLGAANLPIILALWVLYHTLANVGQHWQVYGFGWENQLLETAFLTAFAVPLLSLQPFPAACPPPAVIPWLYKWLAFRVMFGAAGAGLIKIRGDKVWKDLTATDYHYETQPLPNPISYFLHQ 717
+E +YWLTR + LR L ++ VAF VAL+QN L+G+HG+ P K +L ++L N G++ + A PT+ W + ++ +D WL R A GL +S V + GAAN+P+++ LW+LYH+L +VGQ W Y FGWE+QLLET FL F P+ +++ FP PP V W Y+WL FR+M GA GLIKIRGD+ W+DLT DYHYETQP+PNPISY+LHQ
Sbjct: 48 IETGTYWLTRIVLLRYLAFIYFVAFLVALQQNKQLLGNHGLLPIKLHLDKIL-NYVGGEVNQKAISFAPTILWFVD-QSEIDLWLDRIAYGGLGVSAFVLISGAANMPLMIILWLLYHSLVSVGQRW--YSFGWESQLLETGFLAIFLCPVWTVRQFPRKTQPPWVAIWGYRWLIFRIMLGA---GLIKIRGDQCWRDLTCMDYHYETQPVPNPISYYLHQ 261 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1279.2304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1279.2304.1 >prot_Ecto-sp13_S_contig1279.2304.1 ID=prot_Ecto-sp13_S_contig1279.2304.1|Name=mRNA_Ecto-sp13_S_contig1279.2304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp MPQLSALPALASVEPSSYWLTRSLFLRCLGGVFAVAFSVALRQNPALIGDback to top mRNA from alignment at Ecto-sp13_S_contig1279:3..3207- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1279.2304.1 ID=mRNA_Ecto-sp13_S_contig1279.2304.1|Name=mRNA_Ecto-sp13_S_contig1279.2304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3205bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1279:3..3207- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1279:3..3207- >mRNA_Ecto-sp13_S_contig1279.2304.1 ID=mRNA_Ecto-sp13_S_contig1279.2304.1|Name=mRNA_Ecto-sp13_S_contig1279.2304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=696bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1279:3..3207- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |