prot_Ecto-sp13_S_contig12761.2290.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12761.2290.1
Unique Nameprot_Ecto-sp13_S_contig12761.2290.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length146
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12761.2290.1 vs. uniprot
Match: D7FP54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP54_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.810e-71
Identity = 133/146 (91.10%), Postives = 134/146 (91.78%), Query Frame = 0 
Query:    1 MMTMSMSAHKKIMLVVVVFLVGKAESFVHVASCSSRGEAGTTAMAATSSPVGAAGEGARLTRAEAIRRAVAGSQALAAAGVLIGGSARALAEEEMKDEVQQFAELRGEVEKKGREAAMKENLALLSEATAGLKTLDVFIGEKDYKG 146
            MMTMSMSA K IMLVVVVFL GKAESFVHVASC SR EA TTAMAA SSPVG AGEGA LTRAEAIRR VAGSQALAAAGVLIGGSARALAEEEMKDEVQQFAELRG+VEKKGRE A KENLALLSEATAGLKTLDVFIGEKDYKG
Sbjct:    1 MMTMSMSAAKNIMLVVVVFLAGKAESFVHVASCWSRAEAATTAMAAASSPVGGAGEGAGLTRAEAIRRVVAGSQALAAAGVLIGGSARALAEEEMKDEVQQFAELRGKVEKKGREEATKENLALLSEATAGLKTLDVFIGEKDYKG 146
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12761.2290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP54_ECTSI1.810e-7191.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.736

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12761contigEcto-sp13_S_contig12761:2888..4942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12761.2290.1mRNA_Ecto-sp13_S_contig12761.2290.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12761 2888..4942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12761.2290.1 ID=prot_Ecto-sp13_S_contig12761.2290.1|Name=mRNA_Ecto-sp13_S_contig12761.2290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=146bp
MMTMSMSAHKKIMLVVVVFLVGKAESFVHVASCSSRGEAGTTAMAATSSP
VGAAGEGARLTRAEAIRRAVAGSQALAAAGVLIGGSARALAEEEMKDEVQ
QFAELRGEVEKKGREAAMKENLALLSEATAGLKTLDVFIGEKDYKG
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