prot_Ecto-sp13_S_contig102061.228.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig102061.228.1
Unique Nameprot_Ecto-sp13_S_contig102061.228.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
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BLAST of mRNA_Ecto-sp13_S_contig102061.228.1 vs. uniprot
Match: UPI0000161E56 (hypothetical protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E56)

HSP 1 Score: 62.4 bits (150), Expect = 9.630e-9
Identity = 46/98 (46.94%), Postives = 49/98 (50.00%), Query Frame = 0 
Query:   51 DNNXXEQIAENVDKDDSGNVSD-------------------------LGDIGVQSSASSSIXXXXXXXXXXXXXEVGVTESLSGNKRTVEEYAGTSSD 123
            DN   E +A+NVDK DSGNVSD                         LGDIGVQSS SSS+                V ESLSGNKRT EEYAGTSSD
Sbjct:  488 DNERIESVADNVDKGDSGNVSDHRSSTSSSMEVSVDXXXXXXXXXSDLGDIGVQSSVSSSME---------------VAESLSGNKRTAEEYAGTSSD 570
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig102061.228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0000161E569.630e-946.94hypothetical protein n=1 Tax=Ectocarpus siliculosu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig102061contigEcto-sp13_S_contig102061:7..486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig102061.228.1mRNA_Ecto-sp13_S_contig102061.228.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig102061 7..486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig102061.228.1 ID=prot_Ecto-sp13_S_contig102061.228.1|Name=mRNA_Ecto-sp13_S_contig102061.228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
GAENDSDDGGAENDSDDGGAEDDKDGGDDGGAEDDKDGGDDGGADNDKGT
DNNDNEQIAENVDKDDSGNVSDLGDIGVQSSASSSIKDDSGNVSDPGDIE
VGVTESLSGNKRTVEEYAGTSSDSDSDSDDD
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