mRNA_Ecto-sp13_S_contig1274.2271.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1274.2271.1
Unique NamemRNA_Ecto-sp13_S_contig1274.2271.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 6.550e-132
Identity = 228/236 (96.61%), Postives = 233/236 (98.73%), Query Frame = 2
Query:    2 VVQRDALMLLSELCDWSLVDERTLSEELGXXXXXXXXXXEKESRVILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGRAGSEGVSATKKDLDQDRSLQLMGMGGAVAMVSSMVKAADLEELYG 709
            VVQRDALMLLSELCDWSLVDERTLSEELG  XXXXXXXXEKESRVILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSN+TGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLA+VEMF+NYDCDLQAIDLFKRIATALAKVAKGRAGSEG SA+KKDL+QDRSLQLMGMGGAVAMVSSMVKAADLEELYG
Sbjct:  248 VVQRDALMLLSELCDWSLVDERTLSEELGGSXXXXXXXXEKESRVILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNITGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLALVEMFINYDCDLQAIDLFKRIATALAKVAKGRAGSEGASASKKDLEQDRSLQLMGMGGAVAMVSSMVKAADLEELYG 483          
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: A0A6H5KHB1_9PHAE (Sec7_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB1_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 4.450e-123
Identity = 221/307 (71.99%), Postives = 229/307 (74.59%), Query Frame = 2
Query:    2 VVQRDALMLLSELCDWSLVDERTLSEELGXXXXXXXXXX---------------------EKES----------------------RV----------------------------ILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGRAGSEGVSATKKDLDQDRSLQLMGMGGAVAMVSSMVKAADLEELYG 709
            VVQRDALMLLSELCDWSLVDERTLSEELG  XXXXXXXX                     + ES                      RV                            + + KTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTG+VSLSLRVFVALIKGFK+HLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLA+VEMFVNYDCDLQAIDLFKRIATAL KVAKGRAGSEG SA+KKDL+QDRSLQLMGMGGAVAMVSSMVKAADLEELYG
Sbjct:  163 VVQRDALMLLSELCDWSLVDERTLSEELGGSXXXXXXXXXXXXXXERPGDEVGAEAPGARDXESDTGKQGLQNFCPPRVSPYHHRPRVFFWVGGSANTTAANAERANPTAIFSRAYVCKHKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGVVSLSLRVFVALIKGFKDHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLALVEMFVNYDCDLQAIDLFKRIATALVKVAKGRAGSEGASASKKDLEQDRSLQLMGMGGAVAMVSSMVKAADLEELYG 469          
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: A0A7S2RK43_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK43_9STRA)

HSP 1 Score: 168 bits (425), Expect = 3.950e-48
Identity = 94/228 (41.23%), Postives = 142/228 (62.28%), Query Frame = 2
Query:    2 VVQRDALMLLSELCDWSLVDERTLSEELGXXXXXXXXXXEKESRVILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGRAGSEGVSATKKDLDQDRSLQLMGMGGAVAMVSSMVKA 685
            ++ +DA +L   LC  S++ E                   + S +  +SK  +LE +++VL+ + GP F++       VR  LC +LL +CTS+ T +V LSLR+FV LI  FK+HLKAEIEVFI++IFLRILES++S F+HK LVLEV   +C+D  A+VE+F+NYDC+ + +DLF+ I  +L +VAKGR   E    +K+  D    LQ+ G+   VA+  S++++
Sbjct:   12 ILHKDAFLLFRALCKLSMLSETA-----------------RLSALTFQSKLLSLEFLLTVLE-HSGPSFKSSDKFIFAVRQYLCVSLLKNCTSSSTNVVDLSLRLFVRLIAQFKDHLKAEIEVFISNIFLRILESQNSTFEHKRLVLEVFHAICQDAQALVEIFLNYDCNFEHVDLFRSIVLSLERVAKGRIPGES-EGSKRPTDDHTRLQVKGLEALVAITHSLMRS 220          
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: A0A835Z1G7_9STRA (Guanine nucleotide exchange factor in Golgi transport N-terminal-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1G7_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.100e-44
Identity = 82/136 (60.29%), Postives = 104/136 (76.47%), Query Frame = 2
Query:  161 LELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAK 568
            LEL++ +L+   GP FR+       VR  LCA LL +CTS+V  +VSLSLR+FVAL + FK+HLK+E+EVF+T IFLRILESE+ + + KMLVLEV   LC DP A+VE+F+NYDCDL AIDLFKRI  ++AKVAK
Sbjct:    4 LELVLELLEK-SGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 138          
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: A0A225VZD2_9STRA (Brefeldin A-inhibited guanine nucleotide-exchange protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZD2_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.360e-44
Identity = 100/248 (40.32%), Postives = 140/248 (56.45%), Query Frame = 2
Query:    2 VVQRDALMLLSELCDWSLV----DERTLSEELGXXXXXXXXXXEKESRVILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGRAGSEGV----------SATKKDLDQDRSLQLMGMGGAVAMVSSMVKAADLEEL 703
            V+ +DA +L   LC  S+     D  T +   G            E     +SK  +LEL+  +L+   GP FR        +R  LC +LL +CTSN T +VSLSL+VF+ L++ FK HLK E+++FITSIFLR+L+SEH++F+HK+LVLE +  +C DP  + E+F+NYDCD    DLFK+I  ALAK AKG    +            SA  K   QD +L L G+    A  +S+ KAA+  E+
Sbjct:  341 VLHKDAFLLFRSLCRISMRSVADDSPTANGANGSAPGNTGNGANPEDPFAFQSKILSLELVKEILEN-AGPSFRRGERFVHAIRQYLCQSLLQNCTSNYTQIVSLSLQVFLVLLRNFKRHLKTELDIFITSIFLRLLQSEHASFEHKLLVLEALHAICDDPQTLGEIFINYDCDWNTNDLFKQIVHALAKAAKGGRSQDAAAQQYVASLSSSARIKMQQQDAALALKGLECLTATTASLKKAANFVEI 587          
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: A0A067CB14_SAPPC (SEC7 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CB14_SAPPC)

HSP 1 Score: 168 bits (425), Expect = 4.670e-44
Identity = 102/242 (42.15%), Postives = 146/242 (60.33%), Query Frame = 2
Query:    8 QRDALMLLSELCDWSLVDERTLSEELGXXXXXXXXXXEK----ESRVILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGRAGSEGVSATKKD------LDQDRSLQLMGMGGAVAMVSSMVKAADLEEL 703
            Q+DA +L   LC  S+   R+L+E+                  +     +SK  +L+L++S+L  + GP FR+      LVR  LC +LL +CTSN T +V LSLRVFV LI  FK HLKAEIEVFIT+IFL ILESE+S+ DHK+LVLEV+  +C D   + E+F+NYDCD  ++DLFKRI  A++K+AKG+  + G +A   +      +  +  L + G+    A V+S+ K+A+   L
Sbjct:  298 QKDAFLLFRSLCRISM---RSLAEDAASGASTSMTSAGPNQGADDPFAFQSKLVSLDLLLSILN-HSGPAFRSSDKFLQLVRQYLCVSLLQNCTSNYTQIVELSLRVFVELIAHFKAHLKAEIEVFITNIFLGILESENSSLDHKLLVLEVLKQICADGSILGEIFLNYDCDWNSMDLFKRIVNAISKIAKGKKDAPGATANGANQKVRGAILPETMLVIKGLDCLTATVASLKKSANFTAL 535          
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: F0XZH5_AURAN (Sec7_N domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZH5_AURAN)

HSP 1 Score: 154 bits (388), Expect = 5.510e-44
Identity = 81/146 (55.48%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  140 LESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGRA 577
            ++SK  +LEL++SVL+ + GP FR        VR  LC +LL +CTSNVT +V+LSLR+FVALI  F++HLKAEIEVFI  IFLRIL+S++S  +HKMLVLEV   LC D  ++VE+F++YD D +++D+FK I  ALA+V KG A
Sbjct:    1 MQSKVLSLELLLSVLE-HAGPSFRGGARFVGAVRQYLCVSLLKNCTSNVTHVVALSLRIFVALISKFRDHLKAEIEVFIHHIFLRILDSDNSTHEHKMLVLEVFHKLCGDTDSLVEIFLSYDADFESVDVFKHIVVALARVVKGSA 145          
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: A0A1V9ZTE7_9STRA (Brefeldin A-inhibited guanine nucleotide-exchange protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTE7_9STRA)

HSP 1 Score: 167 bits (423), Expect = 8.650e-44
Identity = 104/240 (43.33%), Postives = 145/240 (60.42%), Query Frame = 2
Query:    8 QRDALMLLSELCDWSLVDERTLSEELGXXXXXXXXXXEK----ESRVILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGR--------AGSEGVSATKKDLDQDRSLQLMGMGGAVAMVSSMVKAAD 691
            Q+DA +L   LC  S+   R+L+E+                  +     +SK  +L+L++S+L  + GP FR+      LVR  LC +LL +CTSN T +V LSLRVFV LI  FK HLKAEIEVFIT+IFL ILESE+S+ +HK+LVLEV+  +C D   + E+F+NYDCD  ++DLFKRI TA++K+AKG+        AGS      K  L  +  L + G+    A V+S+ K+A+
Sbjct:  289 QKDAFLLFRSLCRISM---RSLAEDAATSATSSMASTGPNQGADDPFAFQSKLVSLDLLLSILN-HSGPTFRSGDKFLQLVRQYLCVSLLQNCTSNYTQIVELSLRVFVELIAHFKAHLKAEIEVFITNIFLGILESENSSLEHKLLVLEVLKQICADGSILGEIFLNYDCDWNSMDLFKRIVTAISKIAKGKKDAPGSSNAGSSANPKLKGALLPETMLVIKGLECLTATVASLKKSAN 524          
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: W2QLJ3_PHYPN (SEC7 domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2QLJ3_PHYPN)

HSP 1 Score: 166 bits (421), Expect = 1.620e-43
Identity = 111/247 (44.94%), Postives = 150/247 (60.73%), Query Frame = 2
Query:    2 VVQRDALMLLSELCDWSLV----DERTLSEELGXXXXXXXXXXEKESRVILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGR----------AGSEGVSATKKDLDQDRSLQLMGMGGAVAMVSSMVKAADLEE 700
            V+ +DA +L   LC  S+     D  T +    XXXXXXXXXX  E     +SK  +LEL+  +L+   GP FR        +R  LC +LL +CTSN T +VSLSL+VF+ L++ FK HLK E+++FITSIFLR+L+SE+++F+HK+LVLE +  +C DP  + E+F+NYDCD    DLFK+I  ALAK AKG           A S   SA  K L QD +L L G+    A  +S+ KAA+  E
Sbjct:  352 VLHKDAFLLFRSLCRISMRSVADDSPTANGXXXXXXXXXXXXXXPEDPFAFQSKILSLELVKEILEN-AGPSFRRGERFVHAIRQYLCQSLLQNCTSNYTQIVSLSLQVFLVLLRNFKRHLKTELDIFITSIFLRLLQSENASFEHKLLVLEALHAICDDPQTLGEIFINYDCDWNTNDLFKQIVHALAKAAKGGRSQDAAAQQYAASLSSSARIKMLHQDAALALKGLECLTATAASLKKAANFVE 597          
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Match: A0A1V9ZY70_9STRA (Brefeldin A-inhibited guanine nucleotide-exchange protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY70_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.170e-43
Identity = 99/242 (40.91%), Postives = 146/242 (60.33%), Query Frame = 2
Query:    2 VVQRDALMLLSELCDWSLVDERTLSEELGXXXXXXXXXXE----KESRVILESKTAALELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFVALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGRAGSEGVSATKKDLDQ--------DRSLQLMGMGGAVAMVSSMVKAAD 691
            V Q+DA +L   LC  S+   R+L+E+                  +     +SK  +L+L++++L  + GP FR      TL+R  LC +LL +CTSN T +V LSLRVFV LI  FK HLK+EIEVFIT+IFL ILESE+S+ +HK+LVLEV+  +C D   + E+F+NYDCD  ++DLFKRI +A++K+ KG+  S+G   +    +Q        +  L + G+    A V+S+ K+A+
Sbjct:  212 VYQKDAFLLFRSLCRISM---RSLAEDAASGSTSNLANTGLNQGADDPFAFQSKLVSLDLLLAILN-HSGPTFRNGDKFLTLIRQYLCVSLLQNCTSNYTQIVELSLRVFVELITHFKAHLKSEIEVFITNIFLGILESENSSLEHKLLVLEVLKQICADGSILGEIFLNYDCDWNSMDLFKRIVSAISKITKGKKDSQGPGGSNNSANQKIKGAIMPETMLVIKGLECLTATVASLKKSAN 449          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1274.2271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFA1_ECTSI6.550e-13296.61BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax... [more]
A0A6H5KHB1_9PHAE4.450e-12371.99Sec7_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2RK43_9STRA3.950e-4841.23Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A835Z1G7_9STRA1.100e-4460.29Guanine nucleotide exchange factor in Golgi transp... [more]
A0A225VZD2_9STRA1.360e-4440.32Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
A0A067CB14_SAPPC4.670e-4442.15SEC7 domain-containing protein n=2 Tax=Saprolegnia... [more]
F0XZH5_AURAN5.510e-4455.48Sec7_N domain-containing protein (Fragment) n=1 Ta... [more]
A0A1V9ZTE7_9STRA8.650e-4443.33Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
W2QLJ3_PHYPN1.620e-4344.94SEC7 domain-containing protein n=16 Tax=Phytophtho... [more]
A0A1V9ZY70_9STRA2.170e-4340.91Brefeldin A-inhibited guanine nucleotide-exchange ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1274contigEcto-sp13_S_contig1274:15056..17949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score406.0
Seed ortholog evalue1.2e-110
Seed eggNOG ortholog2880.D8LFA1
Model size711
KEGG koko:K18442
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.regulation of ARF protein signal transduction
EggNOG OGsCOG5307@1,KOG0929@2759
Cds size687
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1274.2271.1prot_Ecto-sp13_S_contig1274.2271.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1274 15078..17949 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462681.618502-UTR-Ecto-sp13_S_contig1274:15055..150771681462681.618502-UTR-Ecto-sp13_S_contig1274:15055..15077Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1274 15056..15077 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462681.6290274-CDS-Ecto-sp13_S_contig1274:15077..152061681462681.6290274-CDS-Ecto-sp13_S_contig1274:15077..15206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1274 15078..15206 +
1681462681.6424553-CDS-Ecto-sp13_S_contig1274:15594..157861681462681.6424553-CDS-Ecto-sp13_S_contig1274:15594..15786Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1274 15595..15786 +
1681462681.6523077-CDS-Ecto-sp13_S_contig1274:16732..168191681462681.6523077-CDS-Ecto-sp13_S_contig1274:16732..16819Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1274 16733..16819 +
1681462681.6605065-CDS-Ecto-sp13_S_contig1274:17183..173121681462681.6605065-CDS-Ecto-sp13_S_contig1274:17183..17312Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1274 17184..17312 +
1681462681.6752977-CDS-Ecto-sp13_S_contig1274:17799..179491681462681.6752977-CDS-Ecto-sp13_S_contig1274:17799..17949Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1274 17800..17949 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1274.2271.1

>prot_Ecto-sp13_S_contig1274.2271.1 ID=prot_Ecto-sp13_S_contig1274.2271.1|Name=mRNA_Ecto-sp13_S_contig1274.2271.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
MLLSELCDWSLVDERTLSEELGGGGGGGGGGGEKESRVILESKTAALELI
VSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGLVSLSLRVFV
ALIKGFKNHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDP
LAVVEMFVNYDCDLQAIDLFKRIATALAKVAKGRAGSEGVSATKKDLDQD
RSLQLMGMGGAVAMVSSMVKAADLEELYG
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mRNA from alignment at Ecto-sp13_S_contig1274:15056..17949+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1274.2271.1 ID=mRNA_Ecto-sp13_S_contig1274.2271.1|Name=mRNA_Ecto-sp13_S_contig1274.2271.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2894bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1274:15056..17949+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGTCGTGCAGCGGGACGCTTTGATGCTGCTGAGCGAGCTGTGTGACTGGT CACTTGTCGACGAGCGGACGCTGAGTGAGGAGCTCGGCGGAGGCGGTGGC GGCGGCGGCGGGGGGGGAGAGAAGGAGTCGAGAGTGATATTGGAAAGCAA GGTAGATCTTTGTTTTTGCGTTTTTGTCCTTTTCGTTACAGGGAGTCGCC GGTCGTATATACATAACTGTAGGCATTCTTGCGTATAGTCTTGGTTCGTT GTTGCGCTCGCCACGGTTGCCGCTCGGAGGCTTACATTGCCTTTTGTCTT CCCCCTCTCTTTCTCTTCAGCGTTCTTTCGTCGGTTATCTTCTCCCTCCC GCCCCTGGCTTTTTTGTTCGATCTCTTATTTTGCCATAGAAGCTAAGAAT ACCTCTGCTCTCCGCGAGTTTCACCTTTCCACCGCCCACCGCGATTTTTT TTTGGGGGGGGGGGTTCCGCAAACACTACGGTCGCGAACGCCGAACACGC CAACCACCATTATTCGCGTGCCTACGTCTGCAAACACAGACGGCGGCGCT GGAGCTGATCGTGTCGGTCCTGCAGACGTACGGAGGCCCTAGGTTCCGCG CTCTGCCCGCGGCGGCCACCCTCGTACGGGGCGAGCTGTGCGCGGCGCTG CTCCACCACTGCACCTCCAACGTCACCGGGCTCGTGTCCCTCAGCCTGCG GGTGTTTGTTGCGCTGATCAAGGGGTTCAAGGTGCGACAACGGGCCGATC GATTCGATTATGGTCCCAGGGAAATAGGGAAAGGGGGGTTCGCGGGCGCA TCAGTTGTAGGCATTAGTCTTCGTAGGATGTTTCGTATTATGTAAACATT TTGGAACAAGCATACAATCGGGGAAGTTGGGTTAGGACTTGGGTTAGAGA TAGGGTCTGCGTCCCCCCTTCCTGCTCTATATCCCCATGAACTTATTATT CACGCGCAGGCTGTCCGTCGTAGTGTGTCGACGGGGGGGGGGGATGGGAC TCTTCTTCGTGTATGGAGTATTCGGACCATAGGGCCCCTGTCGTATCTCG ACGAACTTGGAACGGAGAAAGAATTTGGTGGTTCGTGGGACAAGCTGGGG TTTGAGGCACCGAGAAAGGGTTGACTTCTTGCTTGTTCTTTGTGTTTCGG CGAGGGGATTGGCGTACGAGAGGATAGCATCGCGGGATGCGGAGGCGTCG TCAGAGTGGAGGGGGCGACGGACAACGGAGGGTTATTGCTGTTTTTTTCG TGGTGTGTGACCCGAAGTTGTAACATGATGCGCGCCATCCTCTGTGTAGG ATGCTTTGGACGATAAAAGGCGTGCACGCGTGTGTTGTGCTACAGCGTGT GGTGAGGTGCAAACGTTCGCACGACAGGCAGGCGCAACAGCGGAGCAAGA ACGCCGCAAGAGGAGCTGCGGTAGAAACACACCTGTAGCCGAGGAAACAA GCTTCTGTCACACGCGTCGACAACAGTTTTGACAACACCCACCGGGTTGT ACTAATTTCCTTTTCTCGTTCTCAGTTGTTTTGCTTACCCTTTGCCAATT CTTTGGACGTGTACAATTTTCCACGACTTGTTCTCCGCTGGTTGTGTTGT TATTTTTGCTTCTGCGATCACTGCTGCGGCGCCCCCCCGTGTAATATTTT TTTTGGGGGGGGGTCGTGGGATTCCAGAACCATCTGAAGGCGGAGATCGA GGTGTTCATCACGTCCATCTTTCTGCGCATCCTGGAGAGCGAGCACTCGG CGTTCGATCACAAGGTTTGCTGAAGTTCAGGAGCTGTCTCTGAAAGGTTG CCACGAAATTCCACACATTTCATTCGTTGATTTCCACGAACCACGGGCAC GACTCTGGTTCGGGGGGGGAAGCGAGGGATTTCGTATGTTGTGGTGGTTT CATTCCCTTCCATCTTTCCAAATGTGTTTTTATGCTTACGGTGGTGCCGT TGTAGCCTTTTCTGCTACTGGTGGTGCCCTGCTCTTCGATATGATTTGGT CCCTCACGCGTCTCTCTCCCGCGTCCCCTCCCTTTCTCCTGTCCCCTCTC CTTGTCTGTCCGGGGACTTTGCTTGCCACCCAACGCAATACTACCACCAA CGTCGACGACGACGACGATAACAACCAGATGCTGGTTTTGGAAGTCATCT CCGGCCTTTGCCGGGACCCCCTCGCCGTGGTGGAAATGTTCGTCAATTAC GACTGCGACCTCCAGGCCATCGACCTCTTCAAAAGGATCGCCACAGCTTT AGCCAAGGTGTGTGTGTGTGGGGGGGCTACAGTATCAGACTACAGTTTTC GAGAGAGTGAAAAGGGGTCGGGGGGGGGGGGAGGGGAGTCGTGACCGACA AGCCGGAGGCGTCGCCCCCCTTGTTGGCGGGTGTGTGTATCTTTCTCCCG ACTCCTCAAGTAGCAAGGAATTCCTTCTCGCGGTCTCAGGCGTCTTCTGT GCTACATTCTGCCAGATTGGTGTACAACTGGGAAGCAACAACAGAGTGCT GATCCGTTTTGCATTGACGGCTCCCCAACCTTTCTCACAGGAGCTAAAGC TTCCCTCAGCATTTCCAGCACCGCTTGAAAGCAATTCCGAAAGGCTGACA TTACGACACACCATTTGCTCGCAGTGCGGACCTGATTGTGTTTCTTCTCT GCAGCCACATACCCTTCCGCATGGGTTGATATGTTCCTACGTAGCTTTCT CTGCGTAAATCTCTTCATTGTGACCCTCCCTCCGTTTGTCACAGGTAGCC AAAGGCCGAGCAGGGTCCGAGGGTGTAAGTGCCACCAAGAAGGACCTGGA CCAGGACAGATCGCTGCAGCTCATGGGGATGGGGGGCGCGGTAGCCATGG TGTCTTCCATGGTGAAGGCGGCCGATCTGGAGGAGTTATACGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1274:15056..17949+

>mRNA_Ecto-sp13_S_contig1274.2271.1 ID=mRNA_Ecto-sp13_S_contig1274.2271.1|Name=mRNA_Ecto-sp13_S_contig1274.2271.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=687bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1274:15056..17949+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGCTGAGCGAGCTGTGTGACTGGTCACTTGTCGACGAGCGGACGCT
GAGTGAGGAGCTCGGCGGAGGCGGTGGCGGCGGCGGCGGGGGGGGAGAGA
AGGAGTCGAGAGTGATATTGGAAAGCAAGACGGCGGCGCTGGAGCTGATC
GTGTCGGTCCTGCAGACGTACGGAGGCCCTAGGTTCCGCGCTCTGCCCGC
GGCGGCCACCCTCGTACGGGGCGAGCTGTGCGCGGCGCTGCTCCACCACT
GCACCTCCAACGTCACCGGGCTCGTGTCCCTCAGCCTGCGGGTGTTTGTT
GCGCTGATCAAGGGGTTCAAGAACCATCTGAAGGCGGAGATCGAGGTGTT
CATCACGTCCATCTTTCTGCGCATCCTGGAGAGCGAGCACTCGGCGTTCG
ATCACAAGATGCTGGTTTTGGAAGTCATCTCCGGCCTTTGCCGGGACCCC
CTCGCCGTGGTGGAAATGTTCGTCAATTACGACTGCGACCTCCAGGCCAT
CGACCTCTTCAAAAGGATCGCCACAGCTTTAGCCAAGGTAGCCAAAGGCC
GAGCAGGGTCCGAGGGTGTAAGTGCCACCAAGAAGGACCTGGACCAGGAC
AGATCGCTGCAGCTCATGGGGATGGGGGGCGCGGTAGCCATGGTGTCTTC
CATGGTGAAGGCGGCCGATCTGGAGGAGTTATACGGG
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