mRNA_Ecto-sp13_S_contig12737.2267.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12737.2267.1
Unique NamemRNA_Ecto-sp13_S_contig12737.2267.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: D7G0D9_ECTSI (IPT/TIG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D9_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.290e-91
Identity = 170/222 (76.58%), Postives = 187/222 (84.23%), Query Frame = 1
Query:   13 GFT-GNPSSQEINGTYDAVPCESIFSAASASTLGIGH-------TCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQ 654
            G+T    S+  ++G Y A  C +    AS STL +G        + QF+ + + +VTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFL+SSAACVVV+YPANPDPPFV ISAPGAVGYCDDLTLEGSATM SIGSSNVTWEVALAGSDPTVDLSNVSRVLE+ASSNKELTVTIPS+ LAVENTFSF LRV TVLGGSSEAVV+VYKSSLGLL +Q
Sbjct:  119 GYTLAENSTVVLSGDYIA-GCATCTQYASGSTLVLGRALPPELSSAQFTDTGA-QVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLTSSAACVVVNYPANPDPPFVDISAPGAVGYCDDLTLEGSATMPSIGSSNVTWEVALAGSDPTVDLSNVSRVLEEASSNKELTVTIPSEHLAVENTFSFVLRVDTVLGGSSEAVVEVYKSSLGLLVSQ 338          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: D7G0D8_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D8_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 2.480e-83
Identity = 161/294 (54.76%), Postives = 197/294 (67.01%), Query Frame = 1
Query:  151 KVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTLQ 1032
            +VTLGVLS+I PSSS+ CTDGDGTSLTLLAGVVRTEIGAFL++SA CVVVD+PA PDPP+V +SAP A+GYCDDLTLEGSAT +SIG++NVTWEVALAG+    D+ NV+R LE+                                                     IVGSS LQRTRG+ I  RSET  S+CST   +EALASYSW + SANES+ G  +V + VGRDP VL IP Y LGYAGS+Y FQLRT+FG   +++ NATVE++ G +VAAI+GG+ R IG+ Q ++
Sbjct:  131 QVTLGVLSSIVPSSSDACTDGDGTSLTLLAGVVRTEIGAFLTTSAGCVVVDFPATPDPPYVTVSAPSAIGYCDDLTLEGSATSTSIGTTNVTWEVALAGNGQFADIFNVTRHLEE-----------------------------------------------------IVGSSVLQRTRGSAITFRSETATSTCSTTNTEEALASYSWSIASANESFAGGADVTLGVGRDPSVLAIPPYALGYAGSSYQFQLRTSFGG-ISSTVNATVEVVGGAVVAAIAGGSSRRIGVSQEVR 370          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: D7FJB6_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB6_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 3.290e-52
Identity = 134/343 (39.07%), Postives = 192/343 (55.98%), Query Frame = 1
Query:    1 QVTVGFTGNPSSQEINGTYDAVPCESIFSAASASTLGIGHTCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTL 1029
            QV + F G+ SSQ+ING+Y  VPC   FS ASA+TLG+G   QF+SSS +                                    IGAFLSS+A CVVV   + P+PP V ISAP  VG CDDL LEG A   S G +   W V +   + + DL++       A +   L VT+PS  L   +T+ F+LRV T LG  S+A+V+V+KS+  L   +I GS++ ++ RG  + +R+E      S  + D+ +  Y+W L S   + E  P V +  GR+P VL +P+Y+LG+AGS Y+F++  A  + +T SA ATVE++SG ++A I GGT R +G+ Q +
Sbjct:  142 QVLIQFEGSASSQDINGSYAVVPCGEAFSEASAATLGVGCASQFTSSSILT-----------------------------------IGAFLSSAAGCVVVGPASEPNPPVVDISAPEVVGCCDDLILEGIAIFPSTGFT-CNWTVGIVDGNQSFDLAD-------AGAQNGLVVTLPSASLGEGSTYWFSLRVTTGLGSWSDAIVEVFKSTDALPALKIAGSASWKQWRGLPLTVRTEVT----SPRSQDDNVT-YTWTLASEYSATEDFPPVTLTKGRNPSVLKLPAYSLGHAGSIYVFRVTVAGSTPSTTSATATVEVISGALIAHIFGGTTRRVGVMQAI 436          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 5.990e-29
Identity = 91/240 (37.92%), Postives = 130/240 (54.17%), Query Frame = 1
Query:  259 IGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVL---------EQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANAT 951
            I AFLSS   CV V    NP+ P V ISAP  VG C +L LEG A+  S GSS   W V         +L+  SR L          Q ++ K+  VT+PS  L   +T+ F LRV + LG S EA ++V+KS+  L   +I GS++ +  RG ++ +R+E  L        +    +Y+W +LS + +    P +V+  GR+P VL +P Y LGYAGS Y+F++  A G ++  SA AT
Sbjct:   13 IEAFLSSEPGCVAVGPALNPNEPVVEISAPKVVGCCSNLVLEGVASYPSTGSSRA-WVVVYCN---VAELAVFSRPLLNTVHLVTSRQRAAAKDFVVTLPSTSLDEGSTYIFGLRVESALGVSGEASIEVFKSAEALPALKIAGSASRKHWRGLQLTIRTEVSLPR-----VENGNNTYAWTVLSESSATADFPPLVLTSGRNPSVLTLPPYALGYAGSAYVFRVDLADGIQSATSATAT 243          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: D7FJB7_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB7_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 7.480e-22
Identity = 80/255 (31.37%), Postives = 116/255 (45.49%), Query Frame = 1
Query:  265 AFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTL 1029
            AFLSS   CV V    NP+ P V ISAP  VG C +L LEG  +  S     + W +     + T DL++     EQ                                                     I GS++ +  RG ++ +R+E  L        +    +Y+W +LS + +    P +V+  GR+P VL +P YTLGYAGS Y+F++  A G ++  SA ATVE++SG I+A I+GGT R +G  QT+
Sbjct:   70 AFLSSEPGCVAVGPALNPNEPVVEISAPEVVGCCSNLILEGVGSYPST-DIELNWTIEATDGNGTFDLTDARAAFEQ-----------------------------------------------------IAGSASRKHWRGLQLTIRTEVSLPR-----VENGNNTYAWTVLSESSATADFPPIVLTSGRNPSVLTLPPYTLGYAGSAYVFRVDLADGIQSATSATATVEVVSGAIIAYIAGGTARRLGASQTI 265          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: A0A8J4Q2I3_9MYCE (GPS domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q2I3_9MYCE)

HSP 1 Score: 78.6 bits (192), Expect = 7.660e-12
Identity = 105/367 (28.61%), Postives = 159/367 (43.32%), Query Frame = 1
Query:   70 CESIFSAASASTLGIGHTCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNV-TWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTLQLDASTSVDTDGIDIIPFAYTWHCKSASGGACVSRAGDILDLSAFI 1167
            C  IF+  S  T G G +C +S  S++ + LG  S++  +            L  +AG + +  G     + A  V    A    P   I AP  VG CD + L+GS +    G   V  W V  A ++     S +  +L+    +K   V IP+  LAV  T+SF L+V   LG S    V + K S  ++   I G + +   +  ++ L  +  +S C+   + + L  YSW +  A E    +  V    G++   L IP     Y G++Y+  L  + G++    A  TV I   PI A ISGG K+  G    + LDAS S D    + +   Y W C +   G      G  LD +A I
Sbjct:  907 CSKIFTQNSVKTFGQGASCSYSDPSTLVINLGDESSVLVNQQ----------LQFIAGGILSTQG---EPNDAQKVTLQAATGSIPIASIKAPNTVGPCDQVLLDGSHSSGGAGKPLVFLWTVTEAPANK----SAIQAILKGIKGDK---VEIPNNLLAVNQTYSFNLKVSNWLGKSDSNSVTISKVSSDVIKVTIDGPTKISM-QPADLSLIGKASVSGCNQSKSYDNLV-YSWNISPAIELGSSSKYV----GKN---LTIPENKWEY-GTSYVITLTVSDGAD-QGYATVTVFISKAPIKAVISGGDKK-FGPNSVVTLDASKSSDPTNANAV-LLYKWACTTQGKG---KDCGIPLDSTAII 1237          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: C1MP01_MICPC (Filamin like protein n=5 Tax=Micromonas pusilla TaxID=38833 RepID=C1MP01_MICPC)

HSP 1 Score: 75.5 bits (184), Expect = 8.110e-11
Identity = 103/409 (25.18%), Postives = 169/409 (41.32%), Query Frame = 1
Query:   58 DAVP--CESIFSAASASTLGIGHTCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKEL----TVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLS--SCSTLTADEALASYSWRL-----LSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFG------SETTNSANATVEILSGPIVAAISGGTKRSIGIWQTLQL-----DASTSVDTDGIDIIPFAYTWHCKSASGGACVSRAGDILDLSAFIEGAILSIPPESFPSG 1212
            DA P  C ++ + A+ + +G G TC ++   ++ V  G  +T+AP          G  + L+ GV+    G+   ++    ++  P++  PP   ISAP AVG CD++  + S + S  G   + +E  +  +D T D+  V   L              VT+ S  +    +++  L+V   LG + +      K +      +++G       RG+ + L ++  L   SC++  A  A  +Y W L     L+  +       V        R L +P   L   G  Y ++LRT+ G      S+ T SA  TV    G I A    G  R+  I   L L     D   + DT G     F Y W C  +SGGAC   A  +         + +++P  +  SG
Sbjct: 3424 DAAPRACAAVLTTATTTAVGTGATCAWADDKTLSVYFGPDATLAP----------GDHVVLMPGVIADASGSSHGATGVTRLLA-PSSITPPVASISAPSAVGPCDNIAFDVSGS-SGGGGRKLRYEFGIVANDATADVGVVVAALXXXXXXXXXXXXDVVTLSSNVMTAGVSYNLTLQVTDYLGSAHKVHHGFVKRAYPTPIARVLGGEDRTIRRGHALSLEADVSLPDVSCASFPA-VANVTYEWTLIGGPVLTTKDFPSNDVHVAYNKTLRTRALYVPPKVLA-GGFKYTWRLRTSSGTNPGFYSDVTASATVTV----GAIDANPITGVDRTAFIGAPLLLGVDPVDPDDARDTKGAPY-SFTYAWSCALSSGGACGLPADKVPGTFYSPTASTVTLPAATLTSG 3813          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: A0A7S0CTJ5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CTJ5_MICPS)

HSP 1 Score: 63.9 bits (154), Expect = 3.760e-7
Identity = 98/375 (26.13%), Postives = 156/375 (41.60%), Query Frame = 1
Query:   85 SAASASTLGIGH-TCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELT-----------VTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTR----GNEIVLRSETRLSS--CSTLTADEALAS--YSWRLLS----ANESY--EGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETT---NSANATVEILSGPIVAAISGGTKRSIG-----IWQTLQLDASTSVDTDGIDIIPFAYTWHCKS 1107
            SA  A TLG+    C +S   ++ V  G  ++ AP          G +L     VVR +       S +  + D P  P  PF  +SA  A+G CD +TL+ SA   S+G        A + S    D   V++ L+ A++                V + S +L     ++F  +V   +G S+ A V V K+   L + +I G S +   R     +++ + +E  L S  C+ L  DE   S  +SW+L+     AN  +  +   +   +  R  R L IP  TL  AG TY ++LRT+         + + A ++  S PI A    G  R +      + +    D   + D  G    PF   W C++
Sbjct: 1603 SAELALTLGVSPPACAWSDDKTLAVYFGSRASAAP----------GDALAFKQNVVRNKAENSFYVSGSVSITD-PVRPVLPFAALSAADALGPCDGVTLDASA---SVGGGGRPLTYAFSVSADATDGYAVTKALDDAANAAAAANPGNPGASYPVVRLTSAELDPGVVYTFTAKVTDFVGNSATATVSVNKTMYPLPNARITGVSGIGNARVVRRADDLTVEAEAHLPSHQCAALRQDEVGDSLTFSWQLVDGPVLANSDFPSDALRDAHAKT-RTSRALFIPRRTLR-AGETYRWRLRTSLAINPVRFFSDSFAVIQAESSPIEAGAESGVNRHLFADAPVVLRVDPFDPDDARDATGAPY-PFTVRWSCEA 1960          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G0D9_ECTSI1.290e-9176.58IPT/TIG domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0D8_ECTSI2.480e-8354.76REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJB6_ECTSI3.290e-5239.07GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JCS7_9PHAE5.990e-2937.92REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJB7_ECTSI7.480e-2231.37GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8J4Q2I3_9MYCE7.660e-1228.61GPS domain-containing protein n=1 Tax=Polysphondyl... [more]
C1MP01_MICPC8.110e-1125.18Filamin like protein n=5 Tax=Micromonas pusilla Ta... [more]
A0A7S0CTJ5_MICPS3.760e-726.13Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12737contigEcto-sp13_S_contig12737:1916..4927 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score139.4
Seed ortholog evalue3.6e-30
Seed eggNOG ortholog2880.D7FLQ1
Model size1212
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.detection of mechanical stimulus
EggNOG OGsKOG3599@1,KOG3599@2759
Ec32 ortholog descriptionGPS motif
Ec32 orthologEc-02_000760.3
Cds size1212
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12737.2267.1prot_Ecto-sp13_S_contig12737.2267.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12737 1916..4927 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462681.0566366-CDS-Ecto-sp13_S_contig12737:1915..21041681462681.0566366-CDS-Ecto-sp13_S_contig12737:1915..2104Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12737 1916..2104 -
1681462681.069806-CDS-Ecto-sp13_S_contig12737:2336..24071681462681.069806-CDS-Ecto-sp13_S_contig12737:2336..2407Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12737 2337..2407 -
1681462681.0797963-CDS-Ecto-sp13_S_contig12737:2889..31871681462681.0797963-CDS-Ecto-sp13_S_contig12737:2889..3187Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12737 2890..3187 -
1681462681.0883684-CDS-Ecto-sp13_S_contig12737:3420..35791681462681.0883684-CDS-Ecto-sp13_S_contig12737:3420..3579Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12737 3421..3579 -
1681462681.0975747-CDS-Ecto-sp13_S_contig12737:3788..38741681462681.0975747-CDS-Ecto-sp13_S_contig12737:3788..3874Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12737 3789..3874 -
1681462681.1074443-CDS-Ecto-sp13_S_contig12737:4013..41641681462681.1074443-CDS-Ecto-sp13_S_contig12737:4013..4164Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12737 4014..4164 -
1681462681.1175532-CDS-Ecto-sp13_S_contig12737:4324..44291681462681.1175532-CDS-Ecto-sp13_S_contig12737:4324..4429Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12737 4325..4429 -
1681462681.1277156-CDS-Ecto-sp13_S_contig12737:4774..49271681462681.1277156-CDS-Ecto-sp13_S_contig12737:4774..4927Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12737 4775..4927 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12737.2267.1

>prot_Ecto-sp13_S_contig12737.2267.1 ID=prot_Ecto-sp13_S_contig12737.2267.1|Name=mRNA_Ecto-sp13_S_contig12737.2267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
QVTVGFTGNPSSQEINGTYDAVPCESIFSAASASTLGIGHTCQFSSSSSI
KVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVV
DYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGS
DPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGS
SEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTAD
EALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLF
QLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTLQLDASTS
VDTDGIDIIPFAYTWHCKSASGGACVSRAGDILDLSAFIEGAILSIPPES
FPSG
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mRNA from alignment at Ecto-sp13_S_contig12737:1916..4927-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12737.2267.1 ID=mRNA_Ecto-sp13_S_contig12737.2267.1|Name=mRNA_Ecto-sp13_S_contig12737.2267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3012bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12737:1916..4927- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGACGGTTGGCTTTACAGGCAACCCATCTTCGCAGGAAATCAACGG TACCTACGATGCTGTTCCGTGCGAATCTATATTCTCGGCTGCGTCGGCGT CTACGCTTGGAATAGGACACACTTGCCAGTTTTCGTCTAGCTCTAGTATC AAGGTGGGGGAAGATGCGAGACGCAAGGGAGACCCTGAAGTTGGAAAATC TTCGGGACCAGATTGGATGTAGAAATGTGCTTAATCATGATGTTTTTCAT CCTGTCTTTTTCTCGATACCATCGTCGGCGATTCTTCCTTACACTGTGAC CCTTCCCCTTTACACAATCACACCCTTTTTAGTACATTCCTTTTTTCTGC GCGATATGGTTCTTCTACGAACAGGTGACGGCCTCTACTACACAGTATAC CTTGTGAAAGGGTTTCCTCTCGCACGCAGCCGGCAATAGCTTATGCGAAC GACTCCAACACGATACGAACTAGTTGATTCCATCCTCTTCCTCAACAGGT AACGCTTGGGGTCCTGTCGACGATCGCTCCCTCGTCGAGCGAAGGCTGTA CGGACGGAGATGGAACCTCACTAACGCTGTTGGCCGGCGTGGTTCGAACT GAAGTGAGGCGAATTTTAGTACTTGGCATCGCTGGTGGAGAAGCCCGATT GTCGCGACGTTGCGGGCCTTACAGTCTCGCTCGACACCCACGAAGGTTGA CACACCAGAGCGAAGCTTGAGGGACTCCTTGCCCTTCCTCCTGCGATTCG CTTTCGGCCACAGATCGGGGCATTTCTTTCCTCATCAGCAGCATGCGTAG TCGTCGACTACCCCGCTAACCCAGACCCGCCGTTCGTGGGCATTAGCGCC CCCGGTGCAGTTGGATATTGCGACGACCTCACGCTTGAAGGAAGTGCCAC CATGTCCTCGATAGGTAAGACGAGAGTGCCCTGAATCAAGGTGAGACAGA GAGGACGCCAGCTTCGTTCGCAACACCCATGCCCGAGCGCCAAACACTCT TGACGCGACTCTCATTCCCAAAATTTATTCTACCTGCTGCTTCTACGCCA CAGGCAGCTCCAACGTGACCTGGGAAGTCGCCCTCGCAGGAAGTGACCCG ACCGTAGACCTCTCAAACGTTTCGAGGGTTTTGGAACAGGTGTGCCGCAC GACATGCTGTACACTGCGGTGTATGTGACGATGACAAGCGTAAGCGACAA GTCCCCTTCCCGCACCTTCTCTGTTGACGATACCCACACCTATCCACCTC ATAGCACCCCCAAGTTGATTCAGTCAGCCAAGCTGTCAGCACCACCCCGA GTCATGTGTGCGTGGCACCTCAAACATTTGCCTCCCACGGTACCACAGGC TAGCTCTAACAAAGAGCTAACGGTGACGATTCCAAGCAAGGATCTCGCTG TGGAAAACACTTTCTCCTTCGCCTTAAGAGTGGGTACAGTTCTTGGGGGC TCTTCAGAAGCGGTGGTGAAGGTGTACAAATCCTCCCTTGGGCTGCTTGA CACGCAGGTGAGGAATTGTGAATCTGCTTAACGTATTTCTTCAGCTTTGA TACAGTGTGGTTGTCAAAGGCTCAGCTGTGGGACAGGCATGCCAAAGCTC GACGATCGATGGGGCCGCTGCACGCCCTGAAATCGGATGTATCACCTTAG GTTGCACCCTAGAGGACCTCAATACCTTCCCACACGCTTGCCTTCACACC GTACGTGGTCCCTAAACCGGGTCGGCACGGTACTGCGTAGATCGTGGGAT CATCAGCTCTACAGCGGACCCGCGGAAATGAAATAGTGCTCCGCAGCGAG ACGAGACTATCTTCGTGTTCAACGTTAACGGCTGATGAGGCACTCGCATC GTATTCGTGGAGGCTGCTTTCAGCCAATGAATCGTACGAAGGAACACCGG AGGTGGTGGTGGAGGTCGGTCGAGATCCGCGTGTTCTTGTCATCCCGTCT TATACTTTGGGCTATGCAGGAAGCACGTACCTGTTTCAACTGAGGACCGC ATTCGGCAGTGAAACTACAAATTCCGCCAACGCAACCGGTAAATCAGGCT GTCGAGCGCGCTCGTGTGGCGTTGTCAGCTAATGGCTGAACGCGAAGTAG TCGAGATACCGGTTCGTTTCCATTGGGACATCGTTGTTAGGGACGATGGG GGCATTAGGTGAAATCAATCATCGGCAGTGTTTCGCAGCGGAAGTACCCT GTTGAAAAATTGATTAGAGGGCTGAAACAATGATGTGTTGCTTAGACACA TGGTCGGGGCCACATCAGTAATCACGCTAGGATCGTTGCCGCATGATTTT GTGTTTGCAATCTGCATGAAGACGGCTCGGAAAAGAATTGAAATGGAGCG TTTCGCCTCATGTCAACCTTCACCCTCCGCAGCTCGGTTCGGGAAGGAGG CGTAGCACGTGACAAACGGTCGTTGAATGGGTTGTCAGAATCACTTTTTT TTTGCTAAATCGAAACATGTCGCACTCTAATTTTACGTTTCTACGCGCTT GATCCGCTCCAACCCCGTAGTCGAGATACTCAGTGGACCAATAGTCGCGG CTATCTCCGGAGGAACAAAGCGGAGCATCGGAATTTGGCAGGCAAGAACA TAGTTGAACGTCCTAGAAAAGCCCACCCTTCCCGCACTCTATCTGGTTTG GGTGCGAACAACCGTTAAAGTATGCGTCGTACCGCAATTTTATCCGATAC AGCTATCCGCCCATGGTCAGCTCCGAAGCGACGGACGGGCTTACTCTTGT AGAAATGACTTCAACCTATGTTTTGGCTACCTCGCCCGCCATCAAATCAT CACGGCACCGCAATGCCCGACAGACTCTGCAGCTGGATGCGTCGACGTCA GTCGATACGGATGGCATAGACATTATTCCGTTCGCCTACACCTGGCATTG CAAGAGCGCATCCGGGGGCGCGTGCGTCTCGAGGGCGGGCGACATATTGG ATCTTTCGGCTTTCATTGAAGGAGCTATTCTCTCCATCCCTCCGGAATCG TTTCCATCTGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12737:1916..4927-

>mRNA_Ecto-sp13_S_contig12737.2267.1 ID=mRNA_Ecto-sp13_S_contig12737.2267.1|Name=mRNA_Ecto-sp13_S_contig12737.2267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12737:1916..4927- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGACGGTTGGCTTTACAGGCAACCCATCTTCGCAGGAAATCAACGG
TACCTACGATGCTGTTCCGTGCGAATCTATATTCTCGGCTGCGTCGGCGT
CTACGCTTGGAATAGGACACACTTGCCAGTTTTCGTCTAGCTCTAGTATC
AAGGTAACGCTTGGGGTCCTGTCGACGATCGCTCCCTCGTCGAGCGAAGG
CTGTACGGACGGAGATGGAACCTCACTAACGCTGTTGGCCGGCGTGGTTC
GAACTGAAATCGGGGCATTTCTTTCCTCATCAGCAGCATGCGTAGTCGTC
GACTACCCCGCTAACCCAGACCCGCCGTTCGTGGGCATTAGCGCCCCCGG
TGCAGTTGGATATTGCGACGACCTCACGCTTGAAGGAAGTGCCACCATGT
CCTCGATAGGCAGCTCCAACGTGACCTGGGAAGTCGCCCTCGCAGGAAGT
GACCCGACCGTAGACCTCTCAAACGTTTCGAGGGTTTTGGAACAGGCTAG
CTCTAACAAAGAGCTAACGGTGACGATTCCAAGCAAGGATCTCGCTGTGG
AAAACACTTTCTCCTTCGCCTTAAGAGTGGGTACAGTTCTTGGGGGCTCT
TCAGAAGCGGTGGTGAAGGTGTACAAATCCTCCCTTGGGCTGCTTGACAC
GCAGATCGTGGGATCATCAGCTCTACAGCGGACCCGCGGAAATGAAATAG
TGCTCCGCAGCGAGACGAGACTATCTTCGTGTTCAACGTTAACGGCTGAT
GAGGCACTCGCATCGTATTCGTGGAGGCTGCTTTCAGCCAATGAATCGTA
CGAAGGAACACCGGAGGTGGTGGTGGAGGTCGGTCGAGATCCGCGTGTTC
TTGTCATCCCGTCTTATACTTTGGGCTATGCAGGAAGCACGTACCTGTTT
CAACTGAGGACCGCATTCGGCAGTGAAACTACAAATTCCGCCAACGCAAC
CGTCGAGATACTCAGTGGACCAATAGTCGCGGCTATCTCCGGAGGAACAA
AGCGGAGCATCGGAATTTGGCAGACTCTGCAGCTGGATGCGTCGACGTCA
GTCGATACGGATGGCATAGACATTATTCCGTTCGCCTACACCTGGCATTG
CAAGAGCGCATCCGGGGGCGCGTGCGTCTCGAGGGCGGGCGACATATTGG
ATCTTTCGGCTTTCATTGAAGGAGCTATTCTCTCCATCCCTCCGGAATCG
TTTCCATCTGGT
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