prot_Ecto-sp13_S_contig12737.2267.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12737.2267.1
Unique Nameprot_Ecto-sp13_S_contig12737.2267.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length404
Homology
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: D7G0D9_ECTSI (IPT/TIG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D9_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.290e-91
Identity = 170/222 (76.58%), Postives = 187/222 (84.23%), Query Frame = 0
Query:    5 GFT-GNPSSQEINGTYDAVPCESIFSAASASTLGIGH-------TCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQ 218
            G+T    S+  ++G Y A  C +    AS STL +G        + QF+ + + +VTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFL+SSAACVVV+YPANPDPPFV ISAPGAVGYCDDLTLEGSATM SIGSSNVTWEVALAGSDPTVDLSNVSRVLE+ASSNKELTVTIPS+ LAVENTFSF LRV TVLGGSSEAVV+VYKSSLGLL +Q
Sbjct:  119 GYTLAENSTVVLSGDYIA-GCATCTQYASGSTLVLGRALPPELSSAQFTDTGA-QVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLTSSAACVVVNYPANPDPPFVDISAPGAVGYCDDLTLEGSATMPSIGSSNVTWEVALAGSDPTVDLSNVSRVLEEASSNKELTVTIPSEHLAVENTFSFVLRVDTVLGGSSEAVVEVYKSSLGLLVSQ 338          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: D7G0D8_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D8_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 2.480e-83
Identity = 161/294 (54.76%), Postives = 197/294 (67.01%), Query Frame = 0
Query:   51 KVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTLQ 344
            +VTLGVLS+I PSSS+ CTDGDGTSLTLLAGVVRTEIGAFL++SA CVVVD+PA PDPP+V +SAP A+GYCDDLTLEGSAT +SIG++NVTWEVALAG+    D+ NV+R LE+                                                     IVGSS LQRTRG+ I  RSET  S+CST   +EALASYSW + SANES+ G  +V + VGRDP VL IP Y LGYAGS+Y FQLRT+FG   +++ NATVE++ G +VAAI+GG+ R IG+ Q ++
Sbjct:  131 QVTLGVLSSIVPSSSDACTDGDGTSLTLLAGVVRTEIGAFLTTSAGCVVVDFPATPDPPYVTVSAPSAIGYCDDLTLEGSATSTSIGTTNVTWEVALAGNGQFADIFNVTRHLEE-----------------------------------------------------IVGSSVLQRTRGSAITFRSETATSTCSTTNTEEALASYSWSIASANESFAGGADVTLGVGRDPSVLAIPPYALGYAGSSYQFQLRTSFGG-ISSTVNATVEVVGGAVVAAIAGGSSRRIGVSQEVR 370          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: D7FJB6_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB6_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 3.290e-52
Identity = 134/343 (39.07%), Postives = 192/343 (55.98%), Query Frame = 0
Query:    1 QVTVGFTGNPSSQEINGTYDAVPCESIFSAASASTLGIGHTCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTL 343
            QV + F G+ SSQ+ING+Y  VPC   FS ASA+TLG+G   QF+SSS +                                    IGAFLSS+A CVVV   + P+PP V ISAP  VG CDDL LEG A   S G +   W V +   + + DL++       A +   L VT+PS  L   +T+ F+LRV T LG  S+A+V+V+KS+  L   +I GS++ ++ RG  + +R+E      S  + D+ +  Y+W L S   + E  P V +  GR+P VL +P+Y+LG+AGS Y+F++  A  + +T SA ATVE++SG ++A I GGT R +G+ Q +
Sbjct:  142 QVLIQFEGSASSQDINGSYAVVPCGEAFSEASAATLGVGCASQFTSSSILT-----------------------------------IGAFLSSAAGCVVVGPASEPNPPVVDISAPEVVGCCDDLILEGIAIFPSTGFT-CNWTVGIVDGNQSFDLAD-------AGAQNGLVVTLPSASLGEGSTYWFSLRVTTGLGSWSDAIVEVFKSTDALPALKIAGSASWKQWRGLPLTVRTEVT----SPRSQDDNVT-YTWTLASEYSATEDFPPVTLTKGRNPSVLKLPAYSLGHAGSIYVFRVTVAGSTPSTTSATATVEVISGALIAHIFGGTTRRVGVMQAI 436          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 5.990e-29
Identity = 91/240 (37.92%), Postives = 130/240 (54.17%), Query Frame = 0
Query:   87 IGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVL---------EQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANAT 317
            I AFLSS   CV V    NP+ P V ISAP  VG C +L LEG A+  S GSS   W V         +L+  SR L          Q ++ K+  VT+PS  L   +T+ F LRV + LG S EA ++V+KS+  L   +I GS++ +  RG ++ +R+E  L        +    +Y+W +LS + +    P +V+  GR+P VL +P Y LGYAGS Y+F++  A G ++  SA AT
Sbjct:   13 IEAFLSSEPGCVAVGPALNPNEPVVEISAPKVVGCCSNLVLEGVASYPSTGSSRA-WVVVYCN---VAELAVFSRPLLNTVHLVTSRQRAAAKDFVVTLPSTSLDEGSTYIFGLRVESALGVSGEASIEVFKSAEALPALKIAGSASRKHWRGLQLTIRTEVSLPR-----VENGNNTYAWTVLSESSATADFPPLVLTSGRNPSVLTLPPYALGYAGSAYVFRVDLADGIQSATSATAT 243          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: D7FJB7_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB7_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 7.480e-22
Identity = 80/255 (31.37%), Postives = 116/255 (45.49%), Query Frame = 0
Query:   89 AFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTL 343
            AFLSS   CV V    NP+ P V ISAP  VG C +L LEG  +  S     + W +     + T DL++     EQ                                                     I GS++ +  RG ++ +R+E  L        +    +Y+W +LS + +    P +V+  GR+P VL +P YTLGYAGS Y+F++  A G ++  SA ATVE++SG I+A I+GGT R +G  QT+
Sbjct:   70 AFLSSEPGCVAVGPALNPNEPVVEISAPEVVGCCSNLILEGVGSYPST-DIELNWTIEATDGNGTFDLTDARAAFEQ-----------------------------------------------------IAGSASRKHWRGLQLTIRTEVSLPR-----VENGNNTYAWTVLSESSATADFPPIVLTSGRNPSVLTLPPYTLGYAGSAYVFRVDLADGIQSATSATATVEVVSGAIIAYIAGGTARRLGASQTI 265          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: A0A8J4Q2I3_9MYCE (GPS domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q2I3_9MYCE)

HSP 1 Score: 78.6 bits (192), Expect = 7.660e-12
Identity = 105/367 (28.61%), Postives = 159/367 (43.32%), Query Frame = 0
Query:   24 CESIFSAASASTLGIGHTCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNV-TWEVALAGSDPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTADEALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTLQLDASTSVDTDGIDIIPFAYTWHCKSASGGACVSRAGDILDLSAFI 389
            C  IF+  S  T G G +C +S  S++ + LG  S++  +            L  +AG + +  G     + A  V    A    P   I AP  VG CD + L+GS +    G   V  W V  A ++     S +  +L+    +K   V IP+  LAV  T+SF L+V   LG S    V + K S  ++   I G + +   +  ++ L  +  +S C+   + + L  YSW +  A E    +  V    G++   L IP     Y G++Y+  L  + G++    A  TV I   PI A ISGG K+  G    + LDAS S D    + +   Y W C +   G      G  LD +A I
Sbjct:  907 CSKIFTQNSVKTFGQGASCSYSDPSTLVINLGDESSVLVNQQ----------LQFIAGGILSTQG---EPNDAQKVTLQAATGSIPIASIKAPNTVGPCDQVLLDGSHSSGGAGKPLVFLWTVTEAPANK----SAIQAILKGIKGDK---VEIPNNLLAVNQTYSFNLKVSNWLGKSDSNSVTISKVSSDVIKVTIDGPTKISM-QPADLSLIGKASVSGCNQSKSYDNLV-YSWNISPAIELGSSSKYV----GKN---LTIPENKWEY-GTSYVITLTVSDGAD-QGYATVTVFISKAPIKAVISGGDKK-FGPNSVVTLDASKSSDPTNANAV-LLYKWACTTQGKG---KDCGIPLDSTAII 1237          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: C1MP01_MICPC (Filamin like protein n=5 Tax=Micromonas pusilla TaxID=38833 RepID=C1MP01_MICPC)

HSP 1 Score: 75.5 bits (184), Expect = 8.110e-11
Identity = 103/409 (25.18%), Postives = 169/409 (41.32%), Query Frame = 0
Query:   20 DAVP--CESIFSAASASTLGIGHTCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKEL----TVTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLS--SCSTLTADEALASYSWRL-----LSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFG------SETTNSANATVEILSGPIVAAISGGTKRSIGIWQTLQL-----DASTSVDTDGIDIIPFAYTWHCKSASGGACVSRAGDILDLSAFIEGAILSIPPESFPSG 404
            DA P  C ++ + A+ + +G G TC ++   ++ V  G  +T+AP          G  + L+ GV+    G+   ++    ++  P++  PP   ISAP AVG CD++  + S + S  G   + +E  +  +D T D+  V   L              VT+ S  +    +++  L+V   LG + +      K +      +++G       RG+ + L ++  L   SC++  A  A  +Y W L     L+  +       V        R L +P   L   G  Y ++LRT+ G      S+ T SA  TV    G I A    G  R+  I   L L     D   + DT G     F Y W C  +SGGAC   A  +         + +++P  +  SG
Sbjct: 3424 DAAPRACAAVLTTATTTAVGTGATCAWADDKTLSVYFGPDATLAP----------GDHVVLMPGVIADASGSSHGATGVTRLLA-PSSITPPVASISAPSAVGPCDNIAFDVSGS-SGGGGRKLRYEFGIVANDATADVGVVVAALXXXXXXXXXXXXDVVTLSSNVMTAGVSYNLTLQVTDYLGSAHKVHHGFVKRAYPTPIARVLGGEDRTIRRGHALSLEADVSLPDVSCASFPA-VANVTYEWTLIGGPVLTTKDFPSNDVHVAYNKTLRTRALYVPPKVLA-GGFKYTWRLRTSSGTNPGFYSDVTASATVTV----GAIDANPITGVDRTAFIGAPLLLGVDPVDPDDARDTKGAPY-SFTYAWSCALSSGGACGLPADKVPGTFYSPTASTVTLPAATLTSG 3813          
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Match: A0A7S0CTJ5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CTJ5_MICPS)

HSP 1 Score: 63.9 bits (154), Expect = 3.760e-7
Identity = 98/375 (26.13%), Postives = 156/375 (41.60%), Query Frame = 0
Query:   29 SAASASTLGIGH-TCQFSSSSSIKVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVVDYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGSDPTVDLSNVSRVLEQASSNKELT-----------VTIPSKDLAVENTFSFALRVGTVLGGSSEAVVKVYKSSLGLLDTQIVGSSALQRTR----GNEIVLRSETRLSS--CSTLTADEALAS--YSWRLLS----ANESY--EGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLFQLRTAFGSETT---NSANATVEILSGPIVAAISGGTKRSIG-----IWQTLQLDASTSVDTDGIDIIPFAYTWHCKS 369
            SA  A TLG+    C +S   ++ V  G  ++ AP          G +L     VVR +       S +  + D P  P  PF  +SA  A+G CD +TL+ SA   S+G        A + S    D   V++ L+ A++                V + S +L     ++F  +V   +G S+ A V V K+   L + +I G S +   R     +++ + +E  L S  C+ L  DE   S  +SW+L+     AN  +  +   +   +  R  R L IP  TL  AG TY ++LRT+         + + A ++  S PI A    G  R +      + +    D   + D  G    PF   W C++
Sbjct: 1603 SAELALTLGVSPPACAWSDDKTLAVYFGSRASAAP----------GDALAFKQNVVRNKAENSFYVSGSVSITD-PVRPVLPFAALSAADALGPCDGVTLDASA---SVGGGGRPLTYAFSVSADATDGYAVTKALDDAANAAAAANPGNPGASYPVVRLTSAELDPGVVYTFTAKVTDFVGNSATATVSVNKTMYPLPNARITGVSGIGNARVVRRADDLTVEAEAHLPSHQCAALRQDEVGDSLTFSWQLVDGPVLANSDFPSDALRDAHAKT-RTSRALFIPRRTLR-AGETYRWRLRTSLAINPVRFFSDSFAVIQAESSPIEAGAESGVNRHLFADAPVVLRVDPFDPDDARDATGAPY-PFTVRWSCEA 1960          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12737.2267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G0D9_ECTSI1.290e-9176.58IPT/TIG domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0D8_ECTSI2.480e-8354.76REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJB6_ECTSI3.290e-5239.07GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JCS7_9PHAE5.990e-2937.92REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJB7_ECTSI7.480e-2231.37GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8J4Q2I3_9MYCE7.660e-1228.61GPS domain-containing protein n=1 Tax=Polysphondyl... [more]
C1MP01_MICPC8.110e-1125.18Filamin like protein n=5 Tax=Micromonas pusilla Ta... [more]
A0A7S0CTJ5_MICPS3.760e-726.13Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002859PKD/REJ-like domainPFAMPF02010REJcoord: 252..371
e-value: 6.5E-14
score: 51.6
IPR014010REJ domainPROSITEPS51111REJcoord: 200..404
score: 16.607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12737contigEcto-sp13_S_contig12737:1916..4927 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12737.2267.1mRNA_Ecto-sp13_S_contig12737.2267.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12737 1916..4927 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12737.2267.1 ID=prot_Ecto-sp13_S_contig12737.2267.1|Name=mRNA_Ecto-sp13_S_contig12737.2267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
QVTVGFTGNPSSQEINGTYDAVPCESIFSAASASTLGIGHTCQFSSSSSI
KVTLGVLSTIAPSSSEGCTDGDGTSLTLLAGVVRTEIGAFLSSSAACVVV
DYPANPDPPFVGISAPGAVGYCDDLTLEGSATMSSIGSSNVTWEVALAGS
DPTVDLSNVSRVLEQASSNKELTVTIPSKDLAVENTFSFALRVGTVLGGS
SEAVVKVYKSSLGLLDTQIVGSSALQRTRGNEIVLRSETRLSSCSTLTAD
EALASYSWRLLSANESYEGTPEVVVEVGRDPRVLVIPSYTLGYAGSTYLF
QLRTAFGSETTNSANATVEILSGPIVAAISGGTKRSIGIWQTLQLDASTS
VDTDGIDIIPFAYTWHCKSASGGACVSRAGDILDLSAFIEGAILSIPPES
FPSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002859PKD/REJ-like
IPR014010REJ_dom