mRNA_Ecto-sp13_S_contig12657.2200.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: D7G776_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G776_ECTSI) HSP 1 Score: 501 bits (1290), Expect = 1.700e-177 Identity = 239/251 (95.22%), Postives = 242/251 (96.41%), Query Frame = 1
Query: 1 MATRAPAGIDEAEASPSIFQVLVQRDRPLVLRNAARSWRGQPILENPGVKRLTTTWRIHPLDVGTVWEADCIFLEASVGQFLEWEKSAELLSAEGDNPFRHYDPNAHWAYADYKHLKELEDDWAKALEPIIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAIDTSLS 753
MATRAPA IDE EASPSIFQVLVQR+RPLVLRNAARSW+GQPILENP VKRL TTWRIHPL V TVWEADCIFLEASVGQFLEWEKSAE LSAEGDNPFRHYD NAHW+YADYKHLKELEDDWAKALEPIIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEA DTSLS
Sbjct: 1 MATRAPADIDETEASPSIFQVLVQRERPLVLRNAARSWKGQPILENPRVKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWSYADYKHLKELEDDWAKALEPIIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLS 251
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: UPI0018D8A80B (HSPB1-associated protein 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8A80B) HSP 1 Score: 213 bits (542), Expect = 2.900e-62 Identity = 113/237 (47.68%), Postives = 149/237 (62.87%), Query Frame = 1
Query: 79 RPLVLRNAARSWRGQP--------ILENPGVKRLTTTWRIHPLDVGTVWEADCIFLEASVGQFLEWEKS--AELLSAE-GDNPFRHYDPNAHWAYADYKHLKELEDDWAKALEPIIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAIDTSLS 753
+PLVL+N+ SW + +L+ VK T + L+ +WE DC EA++GQF EW +S SA+ NP Y HW Y DYK + + +D L+ + WS LG E + STLW+G+ G+ TP H+DTYG NLVAQ++GRK+W L+PP+ T L PTRIPYEESSVFS V+ P L R+P+F EA P VTLEPG+VLFVPKHWWHFVE+++TS+S
Sbjct: 19 QPLVLKNSLDSWPSRQWSPDYLASVLKEKKVKIRTGSLSAQNLN-SVLWEVDCTHEEATLGQFCEWLRSDAPTTCSAQTSQNPLLKYKRQDHWCYVDYKQMAFMFEDHPDILQ-AVRWSDLGFEDRDGRQSTLWIGSAGAFTPGHYDTYGFNLVAQIYGRKRWHLFPPSQTHLLYPTRIPYEESSVFSPVNIANPALDRYPKFVEATPYVVTLEPGEVLFVPKHWWHFVESLETSIS 253
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: A0A6P4XGZ5_BRABE (HSPB1-associated protein 1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XGZ5_BRABE) HSP 1 Score: 205 bits (522), Expect = 2.020e-61 Identity = 106/246 (43.09%), Postives = 154/246 (62.60%), Query Frame = 1
Query: 40 ASPSIFQVLVQRDRPLVLRNAARSWRGQP---ILENPGVKRLTTTWRIHPLDVGTVWEADCIFLEASVGQFLEWEKSAELLSAEGD----NPFRHYDPNAHWAYADYKHLKELEDDWAKALEPIIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAIDTSLS 753
+SP++F+ +VQ A +W + +LEN + R T R +P +WE DC +++AS+ QF W E + NP + Y+P+ WAY DYK++ EL D LE + W G ++ +ST+W+G+ G+HTP H+DTYG NLV Q++GRKKW+L+PP D+ +L PTR+PYEESSVFSQV+ P++ + P+ +HP V LEPGDVLFVPKHWWH+VE++ TS++
Sbjct: 20 SSPAVFKGMVQNW-------PASNWSPESLAQVLENRTL-RFRTGPR-NPASKDVLWETDCEYIDASLYQFCLWLDPVSPHPPEDNSTDSNPLQPYNPDNTWAYLDYKYMAELFSDQPDILE-AVRWEDFGFPGRSGVESTIWVGSVGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPSLYPTRLPYEESSVFSQVNVAHPNVEQHPKVVNSHPYVVVLEPGDVLFVPKHWWHYVESLSTSIA 255
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: UPI001603A1F7 (HSPB1-associated protein 1-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001603A1F7) HSP 1 Score: 209 bits (532), Expect = 7.180e-61 Identity = 108/247 (43.72%), Postives = 155/247 (62.75%), Query Frame = 1
Query: 43 SPSIFQVLVQRDRPLVLRNAARSWRGQPILENPGVKRLTTTWRIHPLDVGTVWEADCIFLEASVGQFLEW---------EKSAELLSAEGDNPFRHYDPNAHWAYADYKHLKELEDDWAKALEPIIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAIDTSLS 753
SP++F+ +V+ D P + + AR +LEN + R T R +P +WE DC +++A++ QF EW + + E NPF+ Y P WAY DYK++ E+ D L+ + W G + T+ST+W+G+ G+HTP H+DTYG NLV Q++GRKKW+L+PP D+ L PTR+PYEESSVFSQV+ PD+ + P+ +HP V LEPGDVLFVPKHWWH+VE++ TS++
Sbjct: 24 SPAVFKGMVE-DWPALKWSPARL---AQVLENRTL-RFRTGPR-NPASKDVLWETDCEYIDATLQQFCEWLDPVSSPAPREECVTDNKENSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQGVR-WEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSANLYPTRLPYEESSVFSQVNVAHPDIQQHPKLMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVA 263
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: C3Z534_BRAFL (JmjC domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z534_BRAFL) HSP 1 Score: 202 bits (515), Expect = 2.600e-60 Identity = 106/247 (42.91%), Postives = 153/247 (61.94%), Query Frame = 1
Query: 43 SPSIFQVLVQRDRPLVLRNAARSWRGQPILENPGVKRLTTTWRIHPLDVGTVWEADCIFLEASVGQFLEW---------EKSAELLSAEGDNPFRHYDPNAHWAYADYKHLKELEDDWAKALEPIIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAIDTSLS 753
SP++F+ +V+ D P + + AR +LE + R T R +P +WE DC +++A++ QF +W + + E NPF+ Y P WAY DYK++ E+ D L+ + W G + T+ST+W+G+ G+HTP H+DTYG NLV Q++GRKKW+L+PP D+ L PTR+PYEESSVFSQV+ PD+ P+ +HP V LEPGDVLFVPKHWWH+VE++ TS++
Sbjct: 24 SPAVFKGMVE-DWPALNWSPARL---AQVLEYRTL-RFRTGPR-NPASKDVLWEMDCEYIDATLQQFCDWLDPVSSPAPREECVTDNKEDSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQGVR-WEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPKLYPTRLPYEESSVFSQVNVAHPDVEEHPKVMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVA 263
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: A0A8B6D9H0_MYTGA (HSPB1-associated protein 1 n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6D9H0_MYTGA) HSP 1 Score: 204 bits (520), Expect = 2.110e-59 Identity = 102/231 (44.16%), Postives = 143/231 (61.90%), Query Frame = 1
Query: 82 PLVLRNAARSWRGQPILENPGVKRLTTT---WRIHPLDVGTVWEADCIFLEASVGQFLEWEKSAELLSAEGDNPFRHYDPNAHWAYADYKHLKEL---EDDWAKALEPIIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAIDTSLS 753
P+VL+N W + N LT ++ P D +WE +C+ E ++ QF+EW L + +NP Y+ + Y DYK++K+L + D KA +DWS G + + DST+W+G+ G +T H+DTYG NLVAQ++GRK+W L+PP+DT + PTRIPYEESSVFS VD + PD F F +HP V LEPGDVL+VP+HWWHFVE+++TS+S
Sbjct: 15 PIVLKNRISDWPSRKWTPNYLASELTNQRYKCKVAPKDDNVLWETECVHEEITLQQFVEWN----LGKPDENNPLFPYNKSDVTCYIDYKYMKDLFIEKTDHMKA----VDWSVFGLDNRDGNDSTIWIGSEGCYTNCHYDTYGFNLVAQIYGRKRWTLFPPSDTKYMYPTRIPYEESSVFSPVDVKKPDTTTFHLFKNSHPHVVILEPGDVLYVPRHWWHFVESLETSIS 237
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: A0A8D0BTI1_9SAUR (HSPB1 associated protein 1 n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BTI1_9SAUR) HSP 1 Score: 204 bits (518), Expect = 2.350e-59 Identity = 106/234 (45.30%), Postives = 147/234 (62.82%), Query Frame = 1
Query: 58 QVLVQRDRPLVLRNAARSWRGQPILENPGVKRLT---TTWRIHPLDVGT--VWEADCIFLEASVGQFLEWEKSAELLSAEGDNPFRHYDPNAHWAYADYKHLKELEDDWAKALEPIIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAID 741
++++ +P+V RN A W K L +R+ DVG ++E DC ++EA++ +FL W + S+ PF YD +WAYADYK++ +L +D + + I WS G ++ +STLW+G+ G++TP H D+YG NLV Q+ GRK+W LYPP DT L PTRIPYEESSVF +V+ +PDL R+PQF +A P VTL PG VLFVPKHWWH+VE+ID
Sbjct: 20 EIVMSHQKPVVFRNMASDWPALQWNVTYLAKLLAGKQILFRLGTKDVGKTPLFETDCSYVEATLDEFLAW---STRXSSRSCGPFSGYDLCKYWAYADYKYIAKLFEDKPENFQDIR-WSDFGFTGRSGRESTLWIGSSGANTPCHLDSYGCNLVLQVQGRKRWHLYPPEDTNFLYPTRIPYEESSVFCKVNVVSPDLKRYPQFEKAKPHIVTLAPGQVLFVPKHWWHYVESID 249
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: V4BFN1_LOTGI (JmjC domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BFN1_LOTGI) HSP 1 Score: 198 bits (503), Expect = 3.090e-59 Identity = 101/240 (42.08%), Postives = 147/240 (61.25%), Query Frame = 1
Query: 55 FQVLVQ-RDRPLVLRN-----AARSWRGQPILENPGVKRLTTTWRIHPLDVGTVWEADCIFLEASVGQFLEWEKSAELLSAEGDNPFRHYDPNAHWAYADYKHLKELEDDWAKALEPIIDWSTLGC-EKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAIDTSLS 753
F+ ++ R++P+V +N +AR W Q + + +K +I P G ++E C++L+ ++ F+EW S S NP D + ++ Y DYK++ EL D + L+ + DW G ++ DST+W+G+ G TP H+DTYG NLV+Q+ GRKKW L+PP D +L PTRIPYEESSVFS+V+ D R P F HP V LEPGDVL+VPKHWWH+V+ +DT++S
Sbjct: 3 FETFIKDRNQPVVFKNFINEWSARKWTLQHLAQY--LKDTEIKCKIGPKFQG-IFETQCLYLDITIDDFIEWCSSKSRPS----NPLHQIDKDKYFCYLDYKYMVELFSDNEEILQSV-DWGVFGLTDRYGNDSTIWIGSDGCTTPCHYDTYGFNLVSQISGRKKWYLFPPGDMESLYPTRIPYEESSVFSEVNITNTDFNRHPHFKNCHPYMVILEPGDVLYVPKHWWHYVQCLDTAIS 234
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: UPI0001CBC150 (HSPB1-associated protein 1 homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC150) HSP 1 Score: 202 bits (513), Expect = 6.950e-59 Identity = 94/190 (49.47%), Postives = 128/190 (67.37%), Query Frame = 1
Query: 190 GTVWEADCIFLEASVGQFLEW-EKSAELLSAEGDNPFRHYDPNAHWAYADYKHLKELEDDWAKALEPIIDWSTLG-CEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAIDTSLS 753
G +WE DC++ A++ + EW K +E LS DNP + + +W YADYK++ + D L+ + WS G ++ T+ST+W+G+ GSHTP HFDTYG NLVAQ+HG+KKW L+ P T L PTRIPYEESSVFS V+ PDL + P F +A P +TL+PGDVL+VP+HWWHFVE + ++S
Sbjct: 72 GVLWERDCMYRNATLYCYNEWLNKDSEQLSE--DNPLKEFPSTDYWCYADYKYMAHVFQDRTDILKSV-KWSNFGFADRDGTESTIWIGSEGSHTPCHFDTYGCNLVAQIHGKKKWSLFAPHQTAMLYPTRIPYEESSVFSHVNITNPDLKKHPCFQDATPYVITLQPGDVLYVPRHWWHFVECLTPAIS 258
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Match: UPI000462DCF0 (HSPB1-associated protein 1 isoform X2 n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI000462DCF0) HSP 1 Score: 198 bits (503), Expect = 7.120e-59 Identity = 94/195 (48.21%), Postives = 135/195 (69.23%), Query Frame = 1
Query: 166 WRIHPLDVGT--VWEADCIFLEASVGQFLEWEKSAELLSAEGDNPFRHYDPNAHWAYADYKHLKELEDDWAKALEPIIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEAID 741
+RI D+GT ++E +C ++EA++ +FL W S PF+ YD + +W YADYK++ +L +D + + ++ WS G E + DSTLW+G+ G++TP H D+YG NLV Q+ GRK+W LYPP D++ L PTR+PYEESSVFS+V+ +PDL +PQF +A +TLEPG VLFVP+HWWH+VE+ID
Sbjct: 66 FRIGKKDMGTAPLFETECSYVEATLEEFLAWSGRQPSCSC---GPFKAYDLHKYWTYADYKYIAQLFEDKPEHFQDVV-WSDFGFEGRNGRDSTLWIGSRGANTPCHLDSYGCNLVLQVQGRKRWYLYPPEDSSFLYPTRLPYEESSVFSKVNVVSPDLRSYPQFKKAQAHVMTLEPGQVLFVPRHWWHYVESID 256 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12657.2200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12657.2200.1 >prot_Ecto-sp13_S_contig12657.2200.1 ID=prot_Ecto-sp13_S_contig12657.2200.1|Name=mRNA_Ecto-sp13_S_contig12657.2200.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp MATRAPAGIDEAEASPSIFQVLVQRDRPLVLRNAARSWRGQPILENPGVKback to top mRNA from alignment at Ecto-sp13_S_contig12657:3..2840- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12657.2200.1 ID=mRNA_Ecto-sp13_S_contig12657.2200.1|Name=mRNA_Ecto-sp13_S_contig12657.2200.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2838bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12657:3..2840- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12657:3..2840- >mRNA_Ecto-sp13_S_contig12657.2200.1 ID=mRNA_Ecto-sp13_S_contig12657.2200.1|Name=mRNA_Ecto-sp13_S_contig12657.2200.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=753bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12657:3..2840- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |