prot_Ecto-sp13_S_contig12654.2197.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12654.2197.1
Unique Nameprot_Ecto-sp13_S_contig12654.2197.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length799
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12654.2197.1 vs. uniprot
Match: D7FIP9_ECTSI (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP9_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.730e-32
Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 0 
Query:  727 VPTKFLTILYDMLVEGNPQVWWERETGSVVIEDPQLFEAETMPRFFADPKVAGFLRQLAFYGFKKVGVGMRER 799
            VPTKFL+ILYDMLVEGNPQVWWERETGSVVIEDPQLFEAETMPRFF DPKV+GFLRQLAFYGFKK G  ++E+
Sbjct:   66 VPTKFLSILYDMLVEGNPQVWWERETGSVVIEDPQLFEAETMPRFFTDPKVSGFLRQLAFYGFKKPGRSVKEQ 138
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12654.2197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIP9_ECTSI1.730e-3287.67HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 727..798
e-value: 0.0042
score: -0.9
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 731..792
e-value: 6.6E-12
score: 45.9
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 724..798
e-value: 2.2E-12
score: 49.0
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 109..366
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 395..674
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 109..366
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 395..674
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 729..792

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12654contigEcto-sp13_S_contig12654:295..4423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12654.2197.1mRNA_Ecto-sp13_S_contig12654.2197.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12654 295..4979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12654.2197.1 ID=prot_Ecto-sp13_S_contig12654.2197.1|Name=mRNA_Ecto-sp13_S_contig12654.2197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=799bp
MTNEGVGSTQLSSFTNPEVRQQSSSLALLGPPPPEFHPEQQQQQQQQQHF
QYPGSLGQQQQHQHQHQRQLPESQALPSLRSSINFSGTRSRDHHRQRHHH
QHIGPNNPAATQQQPQRSPGRTGGIPVPAVGALPQRQSPQLRPLSFPQSG
GGSGSSSGSPRALSPSGMGGAAGFYSRGGERGTGTHQRLARTLPSPFSGG
GSRSVDGLDIGPSSTQQQQQQQFSVAALPNAAWPPSLLPGYGTMSMPPSQ
AQDSAPPHRQPQSPAAAAAGGGWGVASPPTGMAARRGGGSEGDRAASPNS
GMGGTSTRPASPGSWVAPQAQRSGSGGGGIAGGSSAMGRTGSGQKKPRIV
QQQQQQHQQKQQQPQAPFARVTDGSGESYGGGGLPQRLLPQVAHHSPHAQ
QQQQQQQQQQWGMGATTNVLARSVTAGGPWPVNRSHGGGGGGGGGGTARA
GLQQTPTYGWSTQDSSSRLPQPSPDVGAMMARAIGGGAQRQQKAGMNLVG
GGATVGPAALRGGGVFAGVGAAASSSGPVSLLSAPVGDFVKQPHRVGKRP
PQQQQRGRGLVLAPRQELAGQQGPPSAAAAAAVAAINAAAMGDAGSREWS
ALRTTIPFYQGMLKIPQQGQQPKMLPQQQQQQQQQQHVAAPASPPLPVTV
SPLPSPRFTPIAPMIPKQQPAAMPPPTPPPPSPPPTSAVPKGVSTGGKGE
GGKAGGAATGGNGGGGGAGRGPGRRGVPTKFLTILYDMLVEGNPQVWWER
ETGSVVIEDPQLFEAETMPRFFADPKVAGFLRQLAFYGFKKVGVGMRER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf