prot_Ecto-sp13_S_contig10199.219.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10199.219.1
Unique Nameprot_Ecto-sp13_S_contig10199.219.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length495
Homology
BLAST of mRNA_Ecto-sp13_S_contig10199.219.1 vs. uniprot
Match: D8LLR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR2_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 2.440e-80
Identity = 418/479 (87.27%), Postives = 421/479 (87.89%), Query Frame = 0
Query:    4 WAEEGGAKNLRLEVKGHGDADDGSEWGNYYSWQGPDSRAPSSGQAKDGTFGVRRQSNQSEGEGGKHLGAWATDSSGAPTGGXXXXX-QASFPSHPSPLAGAGEERTSETRWRKQANGASANDAAAASSSRRTGRSLSARDLRAAAXLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PMLSDFDTLTLGGSERPVTPVGEESQTTYQLPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRDNEGSPTHFGVAERGXXXXXXXXXXXXXXXXXXXXXXXXRVTYGWAGAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATGPSSPRLIKGGFGPANPLSWTAKDNASGAGGNTSFSHT 479
            WA   GAKNLRLEVKG GD DDGSEWGNYYSWQGPDSRAPSSGQAKDGTFGVRRQSNQSEGEGG++LG WATDSSGAP   XXXXX QASFPSHPSPLAGAGEERTSETRWRKQANGASA DAA  SSSRRTGRSLSARDLRAAA LDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PMLSDFDTLTLGGSERPVTPVGEESQTTYQLPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   XXXXXXXXXXXXXXXXXXXXXXXR+TYGWAGAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  XXXXXXXXXXXXXXXXXXXXX PSATGPSSPRLIKGGFGPANPLSWTAKDNASG GGNTSFSHT
Sbjct:  904 WAGGRGAKNLRLEVKGDGDGDDGSEWGNYYSWQGPDSRAPSSGQAKDGTFGVRRQSNQSEGEGGRNLGPWATDSSGAPXXXXXXXXXQASFPSHPSPLAGAGEERTSETRWRKQANGASATDAAG-SSSRRTGRSLSARDLRAAAALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMLSDFDTLTLGGSERPVTPVGEESQTTYQLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXRITYGWAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANSGPVRRKERGDGPSSPXXXXXXXXXXXXXXXXXXXXXQPSATGPSSPRLIKGGFGPANPLSWTAKDNASGTGGNTSFSHT 1379          
BLAST of mRNA_Ecto-sp13_S_contig10199.219.1 vs. uniprot
Match: A0A6H5JEL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL9_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 6.260e-80
Identity = 401/466 (86.05%), Postives = 402/466 (86.27%), Query Frame = 0
Query:   12 NLRLEVKGHGDADDGSEWGNYYSWQGPDSRAPSSGQAKDGTFGVRRQSNQSEGEGGKHLGAWATDSSGAPTGGXXXXXQASFPSHPSPLAGAGEERTSETRWRKQANGASANDAAAASSSRRTGRSLSARDLRAAAXLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMLSDFDTLTLGGSERPVTPVGEESQTTYQLPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRDNEGSPTHFGVAERGXXXXXXXXXXXXXXXXXXXXXXXXRVTYGWAGAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PSATGPSSPRLIKGGFGPANPLSWTAKDNASGAGGNTSF 476
            NLRLEVKGHGD DDGSEWGNYYSWQGPDSRAPSSGQAKDGTFGVRRQSNQSE EGGKHLGAWATDSSGAPTGG     QASFPSHPSPLAGAGEERTSE RWRKQANGASANDAAA SSSRRTGRSLSARDLRAAA LD                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    PMLSDFDTLTLGGSERPVTPVGEESQT YQ+P A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   XXXXXXXXXXXXXXXXXXXXXXXRVTYGWAGA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P ATG SSPRLIKGGFGPANPLSWTAKDNASGAGGNTSF
Sbjct: 1047 NLRLEVKGHGDGDDGSEWGNYYSWQGPDSRAPSSGQAKDGTFGVRRQSNQSEEEGGKHLGAWATDSSGAPTGGGGAGGQASFPSHPSPLAGAGEERTSEARWRKQANGASANDAAA-SSSRRTGRSLSARDLRAAAALDVGSGGGCDTASPSRMPAEKGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVVPMLSDFDTLTLGGSERPVTPVGEESQTAYQIPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXRVTYGWAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLATGSSSPRLIKGGFGPANPLSWTAKDNASGAGGNTSF 1509          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10199.219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLR2_ECTSI2.440e-8087.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL9_9PHAE6.260e-8086.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10199contigEcto-sp13_S_contig10199:2257..4399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10199.219.1mRNA_Ecto-sp13_S_contig10199.219.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10199 2257..4399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10199.219.1 ID=prot_Ecto-sp13_S_contig10199.219.1|Name=mRNA_Ecto-sp13_S_contig10199.219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=495bp
NGGWAEEGGAKNLRLEVKGHGDADDGSEWGNYYSWQGPDSRAPSSGQAKD
GTFGVRRQSNQSEGEGGKHLGAWATDSSGAPTGGGGGGGQASFPSHPSPL
AGAGEERTSETRWRKQANGASANDAAAASSSRRTGRSLSARDLRAAAALD
GSGGGGGHTASPSRMPPEKGTGAGGGRRKGEVAGRRKSSNEGNGDNAHQA
ASTAASAAAAAPMLSDFDTLTLGGSERPVTPVGEESQTTYQLPAAAAAAA
AAAGAGESGSKKQLALRRERTHPPPLPPRRDNEGSPTHFGVAERGGSQQQ
DPSGAAAAGSGVAPPPLPPRVTYGWAGAAGVVATSQQVDPTAGAAAATGG
GGGGAGRSNASSPPPPDPPSLAGVRGASSASAAVTAGASVGGGGVVRANS
GSVRRKEKGDGPSSPRKRATERGGGDAPSSLLVQQQQPSATGPSSPRLIK
GGFGPANPLSWTAKDNASGAGGNTSFSHTNTENKRPAPGVGGGAG
back to top