prot_Ecto-sp13_S_contig12640.2187.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12640.2187.1
Unique Nameprot_Ecto-sp13_S_contig12640.2187.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length226
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12640.2187.1 vs. uniprot
Match: A0A6H5KVB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVB4_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 8.510e-92
Identity = 142/165 (86.06%), Postives = 147/165 (89.09%), Query Frame = 0 
Query:   51 MVYCCSSSGSNGCLPAQAFVASPATHLRSAPAFAFRGRGRGGSTTWAPEMAFPAGGRRCFDTGLAFTRQQMIDMGLVPPEGAEQEAQDLLLSRPPSTEGKEGAGGHPAAMADDTEEPAEAVGLIGHFEASRLLAQKGKAGTFVGSLDMSMTERELVSTEEGVGEG 215
            M+YCCSSSG NGC  AQAFVASP TH RSAPA AFRGRGRGGST WA EMAFPAG   CF+T LAFTRQQMIDMGLVPPE +EQEAQDLL SRPPSTE +EGAGGHPAA+ADD EEPAEAVGLIGHFEASRLL QKGK GTFVGSLDMSMTERELVSTEEGVGEG
Sbjct:    1 MLYCCSSSGRNGCPSAQAFVASPTTHERSAPALAFRGRGRGGSTNWAAEMAFPAGRLWCFNTALAFTRQQMIDMGLVPPEASEQEAQDLLPSRPPSTEEEEGAGGHPAAIADDAEEPAEAVGLIGHFEASRLLVQKGKEGTFVGSLDMSMTERELVSTEEGVGEG 165
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12640.2187.1 vs. uniprot
Match: D8LS47_ECTSI (Predicted methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS47_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.310e-51
Identity = 100/122 (81.97%), Postives = 102/122 (83.61%), Query Frame = 0 
Query:  100 MAFPA---GGRRCFDTGLAFTRQQMIDMGLVPPEGAEQEAQDLLLSRPPSTEGKEGAG------GHPAAMADDTEEPAEAVGLIGHFEASRLLAQKGKAGTFVGSLDMSMTERELVSTEEGV 212
            MAFPA   GGRRC +T LAFTRQQMIDMGLVPPEGAEQEAQ+LLLSRP STE            GHPAAMADD EEPAEAVGLIGHFEASRLLAQKGK GTFVGSLDMSMTERELVSTEEGV
Sbjct:    1 MAFPAPNTGGRRCSNTALAFTRQQMIDMGLVPPEGAEQEAQNLLLSRPYSTEXXXXXXXXXXXXGHPAAMADDAEEPAEAVGLIGHFEASRLLAQKGKEGTFVGSLDMSMTERELVSTEEGV 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12640.2187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVB4_9PHAE8.510e-9286.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS47_ECTSI2.310e-5181.97Predicted methyltransferase n=1 Tax=Ectocarpus sil... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 42..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 50..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12640contigEcto-sp13_S_contig12640:1101..3976 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12640.2187.1mRNA_Ecto-sp13_S_contig12640.2187.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12640 941..4091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12640.2187.1 ID=prot_Ecto-sp13_S_contig12640.2187.1|Name=mRNA_Ecto-sp13_S_contig12640.2187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp
MQEESPSFSDAYRAPTAMRRQRRRRRRRRRRPWRFENRSSNCSILLACSS
MVYCCSSSGSNGCLPAQAFVASPATHLRSAPAFAFRGRGRGGSTTWAPEM
AFPAGGRRCFDTGLAFTRQQMIDMGLVPPEGAEQEAQDLLLSRPPSTEGK
EGAGGHPAAMADDTEEPAEAVGLIGHFEASRLLAQKGKAGTFVGSLDMSM
TERELVSTEEGVGEGIQIGLFCFFA*
back to top