prot_Ecto-sp13_S_contig9975.21624.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9975.21624.1
Unique Nameprot_Ecto-sp13_S_contig9975.21624.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length221
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9975.21624.1 vs. uniprot
Match: A0A6H5KA77_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA77_9PHAE)

HSP 1 Score: 439 bits (1129), Expect = 2.900e-146
Identity = 215/221 (97.29%), Postives = 217/221 (98.19%), Query Frame = 0 
Query:    1 QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVKSYASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVATVALVARRWRRLERFFHSPFQPFGGRLRQRLDKAAARRGRGGEKGCLASLGDKREWCSSPGCSSPPSVGRKNGEVFLATAFFALLLCEGLYWYLDHGWGNSSIDSLTWQERFARTMGQLANVTMGLMILPVLRNGVFQNV 221
            QLLSASWVVGVFCFFLPLFIFACMA+DDGWEGMTAADVK+YASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVA VALVARRWRRLERFFH PFQPFGGRLRQRLDKAAARRGRGGEKGCLASLGDKREWCSSPG SSPPSVGRKNGEVFLATAFFALLLCEGLYWYLDHGWGNSSIDS TWQERFARTMGQLANVTMGLMILPVLRNGVFQNV
Sbjct:  266 QLLSASWVVGVFCFFLPLFIFACMAMDDGWEGMTAADVKAYASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVAVVALVARRWRRLERFFHGPFQPFGGRLRQRLDKAAARRGRGGEKGCLASLGDKREWCSSPGSSSPPSVGRKNGEVFLATAFFALLLCEGLYWYLDHGWGNSSIDSFTWQERFARTMGQLANVTMGLMILPVLRNGVFQNV 486
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BLAST of mRNA_Ecto-sp13_S_contig9975.21624.1 vs. uniprot
Match: D7FS89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS89_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 1.180e-55
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 0 
Query:    1 QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVKSYASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVATVALVARRWRRL 93
            QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVK+YASSSATQSYGTVWNL+LSPSLILKLFPDVLIYWSFAYLVA VALVARRWRR+
Sbjct:   10 QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVKAYASSSATQSYGTVWNLELSPSLILKLFPDVLIYWSFAYLVAAVALVARRWRRV 102
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9975.21624.1 vs. uniprot
Match: A0A7S2UXK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXK3_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.210e-14
Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 0 
Query:    9 VGV-FCFFLPLFIFACMAVDDGWEGMTAADVKSYASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVATVALVARRWRRLERFFHSPFQPFGG 106
            VGV F +F  LF F CM + D W+ +T ++++S+A+   ++S GTVW  K S SLILKLFPD+L+++ F ++VA VALVA+   RL+      F+  GG
Sbjct:  141 VGVLFVWFFFLF-FCCMVLPDMWKDLTVSELQSWAAEDTSESDGTVWKWKWSDSLILKLFPDILMFYGFLFVVALVALVAQAVPRLQEALFQTFKWSGG 238
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9975.21624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KA77_9PHAE2.900e-14697.29FAD-binding FR-type domain-containing protein n=1 ... [more]
D7FS89_ECTSI1.180e-5595.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UXK3_9STRA6.210e-1445.45Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 214..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..194
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..25
score: 0.556
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 154..176
NoneNo IPR availableTMHMMTMhelixcoord: 70..87
NoneNo IPR availableTMHMMTMhelixcoord: 196..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9975contigEcto-sp13_S_contig9975:665..6070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9975.21624.1mRNA_Ecto-sp13_S_contig9975.21624.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9975 665..6070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9975.21624.1 ID=prot_Ecto-sp13_S_contig9975.21624.1|Name=mRNA_Ecto-sp13_S_contig9975.21624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp
QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVKSYASSSATQSY
GTVWNLKLSPSLILKLFPDVLIYWSFAYLVATVALVARRWRRLERFFHSP
FQPFGGRLRQRLDKAAARRGRGGEKGCLASLGDKREWCSSPGCSSPPSVG
RKNGEVFLATAFFALLLCEGLYWYLDHGWGNSSIDSLTWQERFARTMGQL
ANVTMGLMILPVLRNGVFQNV
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