Homology
BLAST of mRNA_Ecto-sp13_S_contig9975.21624.1 vs. uniprot
Match:
A0A6H5KA77_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA77_9PHAE)
HSP 1 Score: 439 bits (1129), Expect = 2.900e-146
Identity = 215/221 (97.29%), Postives = 217/221 (98.19%), Query Frame = 1
Query: 1 QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVKSYASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVATVALVARRWRRLERFFHSPFQPFGGRLRQRLDKAAARRGRGGEKGCLASLGDKREWCSSPGCSSPPSVGRKNGEVFLATAFFALLLCEGLYWYLDHGWGNSSIDSLTWQERFARTMGQLANVTMGLMILPVLRNGVFQNV 663
QLLSASWVVGVFCFFLPLFIFACMA+DDGWEGMTAADVK+YASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVA VALVARRWRRLERFFH PFQPFGGRLRQRLDKAAARRGRGGEKGCLASLGDKREWCSSPG SSPPSVGRKNGEVFLATAFFALLLCEGLYWYLDHGWGNSSIDS TWQERFARTMGQLANVTMGLMILPVLRNGVFQNV
Sbjct: 266 QLLSASWVVGVFCFFLPLFIFACMAMDDGWEGMTAADVKAYASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVAVVALVARRWRRLERFFHGPFQPFGGRLRQRLDKAAARRGRGGEKGCLASLGDKREWCSSPGSSSPPSVGRKNGEVFLATAFFALLLCEGLYWYLDHGWGNSSIDSFTWQERFARTMGQLANVTMGLMILPVLRNGVFQNV 486
BLAST of mRNA_Ecto-sp13_S_contig9975.21624.1 vs. uniprot
Match:
D7FS89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS89_ECTSI)
HSP 1 Score: 181 bits (460), Expect = 1.180e-55
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 1
Query: 1 QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVKSYASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVATVALVARRWRRL 279
QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVK+YASSSATQSYGTVWNL+LSPSLILKLFPDVLIYWSFAYLVA VALVARRWRR+
Sbjct: 10 QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVKAYASSSATQSYGTVWNLELSPSLILKLFPDVLIYWSFAYLVAAVALVARRWRRV 102
BLAST of mRNA_Ecto-sp13_S_contig9975.21624.1 vs. uniprot
Match:
A0A7S2UXK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXK3_9STRA)
HSP 1 Score: 79.3 bits (194), Expect = 6.210e-14
Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 25 VGV-FCFFLPLFIFACMAVDDGWEGMTAADVKSYASSSATQSYGTVWNLKLSPSLILKLFPDVLIYWSFAYLVATVALVARRWRRLERFFHSPFQPFGG 318
VGV F +F LF F CM + D W+ +T ++++S+A+ ++S GTVW K S SLILKLFPD+L+++ F ++VA VALVA+ RL+ F+ GG
Sbjct: 141 VGVLFVWFFFLF-FCCMVLPDMWKDLTVSELQSWAAEDTSESDGTVWKWKWSDSLILKLFPDILMFYGFLFVVALVALVAQAVPRLQEALFQTFKWSGG 238
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9975.21624.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 3
0 1 Expect = 2.90e-146 / Id = 97.29 Expect = 1.18e-55 / Id = 95.70 Expect = 6.21e-14 / Id = 45.45 Sequence A0A6H5KA77_9PHAE D7FS89_ECTSI A0A7S2UXK3_9STRA
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0
Start 0
Model size 663
Hectar predicted targeting category signal peptide
Exons 5
Ec32 ortholog description Ferric reductase transmembrane component-like domain
Ec32 ortholog Ec-05_004940.1
Cds size 663
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681464257.390219-CDS-Ecto-sp13_S_contig9975:664..809 1681464257.390219-CDS-Ecto-sp13_S_contig9975:664..809 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9975 665..809 -
1681464257.4014385-CDS-Ecto-sp13_S_contig9975:3075..3317 1681464257.4014385-CDS-Ecto-sp13_S_contig9975:3075..3317 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9975 3076..3317 -
1681464257.412409-CDS-Ecto-sp13_S_contig9975:4052..4133 1681464257.412409-CDS-Ecto-sp13_S_contig9975:4052..4133 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9975 4053..4133 -
1681464257.4224267-CDS-Ecto-sp13_S_contig9975:4607..4734 1681464257.4224267-CDS-Ecto-sp13_S_contig9975:4607..4734 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9975 4608..4734 -
1681464257.434786-CDS-Ecto-sp13_S_contig9975:6002..6070 1681464257.434786-CDS-Ecto-sp13_S_contig9975:6002..6070 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig9975 6003..6070 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9975.21624.1
>prot_Ecto-sp13_S_contig9975.21624.1 ID=prot_Ecto-sp13_S_contig9975.21624.1|Name=mRNA_Ecto-sp13_S_contig9975.21624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp
QLLSASWVVGVFCFFLPLFIFACMAVDDGWEGMTAADVKSYASSSATQSY GTVWNLKLSPSLILKLFPDVLIYWSFAYLVATVALVARRWRRLERFFHSP FQPFGGRLRQRLDKAAARRGRGGEKGCLASLGDKREWCSSPGCSSPPSVG RKNGEVFLATAFFALLLCEGLYWYLDHGWGNSSIDSLTWQERFARTMGQL ANVTMGLMILPVLRNGVFQNV back to top mRNA from alignment at Ecto-sp13_S_contig9975:665..6070-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9975.21624.1 ID=mRNA_Ecto-sp13_S_contig9975.21624.1|Name=mRNA_Ecto-sp13_S_contig9975.21624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5406bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9975:665..6070- (Ectocarpus species13 EcNAP12_S_4_19m)CAGCTGCTCTCCGCCTCCTGGGTGGTTGGGGTCTTCTGCTTCTTCTTGCC
GCTGTTTATCTTTGCATG GTAAGGAACAGACAGAGACAAGAGACTGAAAC
AGACATGCGCACAGACAGACAGACAGACAGACAGACAGACAGACAGACAG
ACAGACAGACATGCCCGCGGCAGACAAGAAGGACAGCAGGCCGCTGTTCA
TCTTTGCATGATAAGAGACAGACAGAGACAGAGACAGAGACAGAAACAGA
CATGAGTACGGAGAGACAGACAGACAGACAAACATGCCCGCAGCGGACAA
GAAGGACAGCAGGCCGATGTTCATCTTTGCATGATAAGAGACAGACAGAG
ACAGAGACAGAGACAGAAACAGACATGAGTCCAGACAGACAGACAGACAG
ACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACATGCCCGC
GGCAGACAAGAAGGACAGCAGGCCGATGTTTATCTTTGCAAGGTAAGAAA
CAGATAGAGACAGAGACAGAAACAAACATGCGTGCAGAGAGACAGACAGA
CAGACAGACATGCGTGCAGCGAAGAAGAAGGACAGCAGGTAAGCAGGCGC
ATGAACGGACAGGGACATAAAAAGAGAGTTTTTCGTTCTGAGAGGGAGAG
GAGTGAAGTGGGAGGTAGATGGGCAGGGCGATAGAGAGGCGGGCAGAGAG
AGCCGAAAGCGAGAGAGGAGGAGATGGACAGGACAGAAGGAGACAGGGCA
GGGAGTACAGAGATACAGGGCAACCGCATCCAGTCGAAGAACGTTTGAAA
TCCAAGTGCAAGGTAGCTCGTGTTGTGGGTTTCCTGTTGTTTTTGTCCTC
GTGGTCGTTGTCTTCACCTGCGGAAATTACCCCGCCTCCCCTTCCGAGTC
CCTCTTCTTCCCATAACTGTGCCGGGCTAACAATTTCCGGTGGTCACAAA
CTGACCCCTTCTGTAGAGAATGCGTGCTGAAAACATTTTCGTTCTCAAGA
AATCTTCCACACGAACCTTTGTTTGCCCGCCTCCCTTGTTGTTCCGTTCT
GGCGGTTTCCCTCGTTCCGATTTTTTGCGCCCCTCTTCCTCATCTTGGTC
TATCTTGTGGCCGCCCGTACAGTACGAGCCCGTAGTGAAGAAATATTTCG
TGAAGGCAGAGGCTGAAATTTTCGCGAAAAAACGAGGACAGAGTTGAAAA
GCAGCAGCTCAGCGGCGGATACTATTTTAAACTCTGTTCTGACTAGTTGT
CCTCGGCAGTGGCAGCGAAATATGAACCTGGACCTCGACCCGGTTTTGAC
GTTTCCTACCTCCGGACCCGTACCGTACCGTGTTAGCATGGCTGTGGACG
ACGGTTGGGAGGGGATGACGGCAGCGGACGTGAAATCCTACGCGTCCTCG
TCGGCGACCCAGTCCTACGGGACCGTCTGGAACCTCAAGCTCTCCCCCAG
TCTCATCCTCAAG GTACCTTGACCTATGATACCTGTATTCGTGTGTGTTT
CTACTGCTAGCACGCCAACCGGTTGGCCAATGAAAAGGCCGTTTGTGTGT
AACGGTCGTGGCTCCGATGTGGATCGAAGTACGAGGGTGGTGTGACGAAG
TGCCTCTGCCCTCTTATATCTGAGCTCCCCCTTTTTGGTATCGAAACAAG
AAGGTACCCAACTACGCTACATAGCGGGTCGAGTCCGTGACAACCGATTT
CGACCCTCTTGTATCGGAGCCCCCCTCTTATAAGGTTCCCTGCATGATTG
TGCCTCCTGATTTCCGTCCGCCTTTCTGCCTGCCGCCTGGTTCTGTCTGT
TCGCCTCTTGTCGTGTTACCCGTCCGGTTCTTCCTGCCTGGTTCTCCTGC
CCTGATTCTACCCGTCCGGTTTTACCCGCCGGATTCTCTCTGCCTGGTTC
TGTCCGCCTGATTATGTCCGCGTATTTAATCGAGCAGCTGTTTCCGGACG
TGCTCATCTACTGGAGCTTCGCCTACTTGGTGGCGACGGTAGCGTTGGTG
GCGCGGAGGTGGCGACGG GTGAGGCAACAACAACGTTCACACGTCACAAG
TTGATCCCTGAAACGGCGGCAAATACTCCGCGTTAGTGCTTCCGCGGCTG
TGGTTCTGCACGCCGACGGTGCCAAAATGGCATGATTTGTAGTACGGCGG
TCATTTTTTTCTTTTCTCTTGTCTCGAGGACTGGAAGAGAAAATGAGGTC
CACACGTTAAGCATTTTGTGAAGACGTCGACACCACCACCAGTATCACCA
ACATCATCATCAGCAGCAACAACAACAGCATGAGCAACAACACTGCGTGT
GCACTCGTTTCCGAACGCCTCTTCCTCTGCTACTCCTCCGTAGAAGTTGC
CAACGACAACCCAAGCGTGACCCCGGAGCCTTTTTGTTCGATCCCTTTTC
GACCGCCTCTCCTCGCGACCCTTGTCAACGAACAACCATATCGACGACAC
CACCACCACGACGATCGATGACGACGACGACGACGACATCATCATCAACG
TCAACATCAAACTGCGTACAACGTCACCATCTTCATCATCCACAACAACA
ACGTCTTCATCATCAACACCGGCCACCACCACCACTACCAACAACAACAA
CAACCATCATCATCATCATCGTCGTCGTCGTCAACACCATCAACAACAAC
TTTAAATTACCACGTCACTACCACCACCACCACTACCACCATCAACAACA
ACACCTACATCGTCACCATCATCAACAACAACGAAAATAACAACAACGAA
AAGCTGGAGCGTTTCTTCCACTCCCCTTTCCAGCCCTTCGGCGGACGACT
GCGGCAGCGACTCGACAAGGCCGCGGCACGAAGGGGGCGAGGAGGAGAAA
AAGGATGCCTTGCTTCTCTGGGGGACAAGAGGGAATGGTGTTCGTCGCCG
GGTTGCTCTTCGCCGCCGTCTGTTGGCCGGAAGAACGGAGAGGTGTTCCT
CGCCACGGCGTTTTTCGCCCTCCTCTTGTGCGAGGGCCTCTACTG GTGAG
AGAATCTTTTTTGTTTAAAACACAGCAAAGTGTGAAAAGAGAAATCGTCC
TCCACAGACGTTGGGGAGATTGTACCTTTATGAAGGCGGTGTCCACAAAA
TCCATCGTTAGGTTCCAAGGCGCAGCAAAGAGGAAGAGGTACAGGTTAGC
ACCCATACTTTTGCCAGAGGCTGGGAGTTTTCTTTCCCAGGGTTATTTTG
GGGTCTAGGCTGGACTGTCAGATTTTTTTTGCGCAGAGCGAGAGCGAGCG
GGAGAGAGAGGAGTGCAGAGAAAGACACCAGCGTACTTCTGCACACACAA
CAGCTATCTCCACGTGTAGGCCATGAGGGAAGCCGGCGACAGGGTGGTTC
CCACAGACAGGGTCGTAGAAGGGTTGATGGGTGGTCGCCTGCGGTCAGTA
GGGCAGGTTAGCTGTGTAGCCTTTGAAATGATCAGTGGTCTAGCTGCCTG
AACTACTCTATTTTCGGTATATTGTAAATGATCAGTCCAGAGAGGGCGAA
GTGATCAGCGAACACACATAGCTGGTATTTGTACCTCTGAACTTCTCTGT
TCTCTGCCCCCCCCCGAAATGTGTCCTGCCAGCTCTCTAGAGCCTGTGGT
TATCAAACAACAAGCACACCCACCAGCACACACCTGTACCTCGCGGTTCT
TAGGTTGGGGCGAGGGTATGTCTGGCGCTACGAGCGTGGATGTGTTGCTG
ATTTGTTTTACTCCTCTGCAGCAGTAGTAGCAGTGGTGTTGCAGCGTTGT
AGCTGCTGACACGATGACTGCTGGATCTTGGGAACGATTTTCAAGTTGTT
TGGGTATGCAGCACACCACACGATATCCTCGATATCTGGGCTTCCGCAGG
GCTTGCAATACCTCTCCCTTTTGCTGTCCTCTGCTCTTTGCAGCAGTGGC
GTTTTACGTTCGGGCGAGGATGGGTATGTGTGGTGCTACGAAAGAACACA
AACACATGTCTGTATTTATGCATGTAGACGCACGTACAGTACAAACGTTG
AGAGATTCATGAATTGGCATTGATTGGCCCCATTCCCGATACCCTGATTT
TTCCCGCTGTCGCTGCCGTCTCTTCATTGGTCAGCCGGTTAGCGCGGGTC
CTGAAAATCTAGACACACCTACCTATGAACTTGCCAATACCCGGCCGGAA
GGGCGGCAGGGGGGCAACTCCACGACTTGCCACTACATCAGCTTTTGCAA
ATGATCAGTCTACGATCAGTCAGAACGCCTCAAGACTCAAAAGGGTTAAG
CTAGAAATTACCGATGTATGCGTTTTAGTTTGGGGGTTCTTAATCTTAGC
CGGGCTCACAAATGGTTTGCTCAAGTTCTCAGATGTGGAGTTTTTCGAGG
CTACGTCCATTTCTTGACTCCCAAGCTCTCTCAACTGCCAAGTTCTCTAA
ACAGCCAGTTGTCTTAACTGCCAAGTAGTCTTAACTGCCAAGTAGTCTTA
ACTGCCAAGTAGTCTTAACTGCCAAGTAGTCTTAACTGCTAAGTTGTCTT
AGCTGCCAAGTTCTCTCAACTGCCAAGTTCTCTAAACTGCCAGTTGTCTT
CACTGCCAAGTTGTCTTAACTGTCAAGTCCTCTTAGCTGCAAAGTTCTCT
GAACTTCCAAGTTCTCTGAACTGCTAATTTATCTCAACTTAACTGCCAAG
TTATCTTAATCTAACTGCCACGGTATCTTAACTGCCAAGGTATCTTATTC
GCCAAGTTAACTTATCTGCCAAGTTATCTAAACTGCCAAGTTGTTGCGTT
AAGTGCGGGCACTAGCGGTAGGTGAGTCGTTCTCTCGGTTACTTCATTGA
TTGGCATACACACGTGTTGGGGCCGCGGCCGCGTAAGGCGATAATCGCAC
GGGTCACTTCATTGTTGAAGCATCACAAGAAGAGAACGGATCGGTTCGGT
TTTGAAGCATCACAGGTGTTCGTACTGGAAGGCACCGTTTTTTGGTGGAA
GACGCGGCATGGCTTTTTGTGCCCGTGGTCGGTTGCATCAAGCAAGACGC
ATGTGTTGTGCTTTTATTTCGATCAAGAATTGTCATATATGTGGCGTTAC
AAGCACTCGACGTGGCTTAAACCTTCGCGTAAGAGCATGGCAAAAAATAA
AAATAGGTGAAAATTCATGCAGAAGACGCGTGCCGTGTGTGTGTGTGTTT
GCTATTTAGTTTTCCTTCACGATGAGGTCGAATATACAGGAGAACGAAAA
TGAAGGAATGAATGACAACAACAATGTTCGCGTGTAATTTTTTTTCTTTT
GTTTTTTTTAGGTATCTGGACCACGGATGGGGCAATTCGTCTATCGACTC
CTTGACCTGGCAGGAACGGTTCGCGCGCACGATGGGCCAGCTCGCGAACG
TCACGATGGGGCTCATGATTCTGCCAGTGTTACGAAACGGCGTGTTCCAA
AACGTG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9975:665..6070-
>mRNA_Ecto-sp13_S_contig9975.21624.1 ID=mRNA_Ecto-sp13_S_contig9975.21624.1|Name=mRNA_Ecto-sp13_S_contig9975.21624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=663bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9975:665..6070- (Ectocarpus species13 EcNAP12_S_4_19m) CAGCTGCTCTCCGCCTCCTGGGTGGTTGGGGTCTTCTGCTTCTTCTTGCC GCTGTTTATCTTTGCATGCATGGCTGTGGACGACGGTTGGGAGGGGATGA CGGCAGCGGACGTGAAATCCTACGCGTCCTCGTCGGCGACCCAGTCCTAC GGGACCGTCTGGAACCTCAAGCTCTCCCCCAGTCTCATCCTCAAGCTGTT TCCGGACGTGCTCATCTACTGGAGCTTCGCCTACTTGGTGGCGACGGTAG CGTTGGTGGCGCGGAGGTGGCGACGGCTGGAGCGTTTCTTCCACTCCCCT TTCCAGCCCTTCGGCGGACGACTGCGGCAGCGACTCGACAAGGCCGCGGC ACGAAGGGGGCGAGGAGGAGAAAAAGGATGCCTTGCTTCTCTGGGGGACA AGAGGGAATGGTGTTCGTCGCCGGGTTGCTCTTCGCCGCCGTCTGTTGGC CGGAAGAACGGAGAGGTGTTCCTCGCCACGGCGTTTTTCGCCCTCCTCTT GTGCGAGGGCCTCTACTGGTATCTGGACCACGGATGGGGCAATTCGTCTA TCGACTCCTTGACCTGGCAGGAACGGTTCGCGCGCACGATGGGCCAGCTC GCGAACGTCACGATGGGGCTCATGATTCTGCCAGTGTTACGAAACGGCGT GTTCCAAAACGTG back to top