prot_Ecto-sp13_S_contig9970.21616.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9970.21616.1
Unique Nameprot_Ecto-sp13_S_contig9970.21616.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 5.590e-43
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 AVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGDDGKAFYTQFDDNGVPTHDAAGEPIVKDK 85
            AVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKG+DGKA YTQFDDNGVPTHDAAGEPIVKDK
Sbjct:  557 AVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKDK 641          
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI)

HSP 1 Score: 64.7 bits (156), Expect = 2.980e-10
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 AVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGDDGKAFYTQFDDNGVPTHDAAGEPIVK 83
            +VWKL+DPA L  ER+Q+E  +  + E +AE +RK  E+E + K+P  + FR +        ++ FDDNG+PTHD  G PI K
Sbjct:  529 SVWKLDDPATLRLEREQKEAVKRAKEEQRAEARRKQLEREEKAKVPPQDMFRSMIDQ-----FSAFDDNGMPTHDTQGVPISK 606          
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: A0A7S2UT05_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT05_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.120e-8
Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 0
Query:    2 VWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGDDGKAFYTQFDDNGVPTHDAAGEPIVKDK 85
            +WK++DP VL  E+ QRE E  R               EA+ K+P  E FR    D G+  Y++FDD G+PTH A G+ I K K
Sbjct:   66 IWKMDDPEVLKMEKAQREAEAQRXXXXXXXXXXXXXXXEAKAKVPPEELFRQQVDDAGEPLYSKFDDKGIPTHTADGQEIKKAK 149          
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: L1K2A7_GUITC (Cysteine--tRNA ligase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K2A7_GUITC)

HSP 1 Score: 58.2 bits (139), Expect = 6.030e-8
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    2 VWKLEDPAVLARERQQR----EQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGDDGKAFYTQFDDNGVPTHDAAGEPIVK 83
            +WKL+DP VLARERQQ+     + Q +++E K E  RK  EK +   + A E F+ L        Y++FDD G+PTH+AAGE + K
Sbjct:  578 LWKLDDPEVLARERQQKLMQAAEAQKKKVENKLEKVRKELEKWSGCSVAAGEMFKPLTDK-----YSKFDDQGIPTHNAAGEELSK 658          
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: A0A7S0T994_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0T994_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 7.990e-8
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    1 AVWKLEDP----AVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGDDGKAFYTQFDDNGVPTHDAAGEPIVK 83
            A+WKL D       L R+R+ +  ++ +  EAKAE  RKAAEKEA+ KIP SE F   K  + +  Y+++DD G+PTHD  GE + K
Sbjct:  323 ALWKLYDADELKKELERDREAKALKEAKAAEAKAELARKAAEKEAKAKIPPSEMF---KIGEYEGLYSKYDDEGLPTHDKDGEELPK 406          
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: A0A7S0T8V7_9CHLO (Cysteine--tRNA ligase n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0T8V7_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 8.280e-8
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    1 AVWKLEDP----AVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGDDGKAFYTQFDDNGVPTHDAAGEPIVK 83
            A+WKL D       L R+R+ +  ++ +  EAKAE  RKAAEKEA+ KIP SE F   K  + +  Y+++DD G+PTHD  GE + K
Sbjct:  632 ALWKLYDADELKKELERDREAKALKEAKAAEAKAELARKAAEKEAKAKIPPSEMF---KIGEYEGLYSKYDDEGLPTHDKDGEELPK 715          
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: A0A090M3R1_OSTTA (Cysteinyl-tRNA synthetase/mycothiol ligase (Fragment) n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M3R1_OSTTA)

HSP 1 Score: 53.5 bits (127), Expect = 2.450e-7
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0
Query:   14 ERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGDDGKAFYTQFDDNGVPTHDAAGEPIVK 83
            ER+ +E+++  +  AK E  RK  EKEA+ K+P SE F+    ++    Y++F D+GVPTHDA GEP+ K
Sbjct:    2 EREPKEEKERAKAAAKDEAARKXXEKEAKAKVPPSEMFKTF--EEYAGLYSKFGDDGVPTHDAEGEPLQK 69          
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: A0A1Y1I5L6_KLENI (Cysteine--tRNA ligase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I5L6_KLENI)

HSP 1 Score: 54.7 bits (130), Expect = 1.010e-6
Identity = 31/85 (36.47%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    1 AVWKLEDPAVLARERQQREQEQ----LRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGDDGKAFYTQFDDNGVPTHDAAGEPI 81
            +VWKL+DP  + +ER  +++       ++LE K ++K+K  EK  +  +P    FR  +   G+  Y+ F+D GVPTHDAAG+ +
Sbjct:  676 SVWKLDDPETMRKERDAKKEAADAAAKQKLERKRDSKKKDIEKWTKASVPPEGLFRNARDAQGQPKYSAFNDEGVPTHDAAGKEL 760          
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: A0A6U1C2P7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1C2P7_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.390e-6
Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = 0
Query:    3 WKLEDPAVLARERQQREQEQLRRLEAKAET---KRKAAEKEARKK-IPASEYFRGLKGDDGKAFYTQFDDNGVPTHDAAGEPIVK 83
            WKL+DPAVL RE ++R Q QL +  AK E    KR+A  K A+   IP  E     +  D KAF    D+ G+PT DAAGEP+ K
Sbjct:  113 WKLDDPAVLVREIEERRQAQLEQQRAKREKEIGKRRAELKSAQDAAIPPQELLPRTRAADFKAF----DEKGMPTLDAAGEPVAK 193          
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Match: M4BXK3_HYAAE (DALR_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXK3_HYAAE)

HSP 1 Score: 52.0 bits (123), Expect = 8.830e-6
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    1 AVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGD---DGKAFYTQFDDNGVPTHDAAGEPIVK 83
            AVWKL +   L  E ++++QE+++    K E      E EARKK   +E  + L  D   + K  Y++FDDNG+PTHDAAGEP+ K
Sbjct:  446 AVWKLANKDELLEEIEKKKQEKIK----KEELXXXRLEDEARKKAELAEKAKILPNDMFLELKDKYSKFDDNGLPTHDAAGEPLSK 527          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9970.21616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JK68_9PHAE5.590e-4397.65Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A812UK10_SYMMI2.980e-1043.37Cysteine--tRNA ligase n=1 Tax=Symbiodinium microad... [more]
A0A7S2UT05_9STRA3.120e-840.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
L1K2A7_GUITC6.030e-844.19Cysteine--tRNA ligase n=1 Tax=Guillardia theta (st... [more]
A0A7S0T994_9CHLO7.990e-844.83Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A7S0T8V7_9CHLO8.280e-844.83Cysteine--tRNA ligase n=2 Tax=Ostreococcus mediter... [more]
A0A090M3R1_OSTTA2.450e-744.29Cysteinyl-tRNA synthetase/mycothiol ligase (Fragme... [more]
A0A1Y1I5L6_KLENI1.010e-636.47Cysteine--tRNA ligase n=1 Tax=Klebsormidium nitens... [more]
A0A6U1C2P7_9STRA3.390e-647.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
M4BXK3_HYAAE8.830e-643.02DALR_2 domain-containing protein n=1 Tax=Hyalopero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9970contigEcto-sp13_S_contig9970:158..1972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9970.21616.1mRNA_Ecto-sp13_S_contig9970.21616.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9970 158..1972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9970.21616.1 ID=prot_Ecto-sp13_S_contig9970.21616.1|Name=mRNA_Ecto-sp13_S_contig9970.21616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
AVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEY
FRGLKGDDGKAFYTQFDDNGVPTHDAAGEPIVKDK
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