prot_Ecto-sp13_S_contig996.21607.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig996.21607.1
Unique Nameprot_Ecto-sp13_S_contig996.21607.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length297
Homology
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BLAST of mRNA_Ecto-sp13_S_contig996.21607.1 vs. uniprot
Match: A0A6H5K7M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M0_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 2.430e-35
Identity = 74/82 (90.24%), Postives = 75/82 (91.46%), Query Frame = 0 
Query:    4 GRAAAAPEQQDQASSSSRDRPGDSVAGAARSLLRRRQGCRADRGRDGAEVELSLLPFPPEVMSLALLYAGGKTLSQAACVSK 85
            GRAAAAPEQQ QASSSSRDR GDS+AGAARSLLRRRQGCR   GRDGAE ELSLLPFPPEVMSLALLYA GKTLSQAACVSK
Sbjct:    3 GRAAAAPEQQHQASSSSRDRRGDSIAGAARSLLRRRQGCRVVGGRDGAEAELSLLPFPPEVMSLALLYAEGKTLSQAACVSK 84
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig996.21607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K7M0_9PHAE2.430e-3590.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037293Galactose oxidase, central domain superfamilyGENE3D2.130.10.80coord: 76..224
e-value: 4.8E-9
score: 37.9
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 136..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig996contigEcto-sp13_S_contig996:7995..13817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig996.21607.1mRNA_Ecto-sp13_S_contig996.21607.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig996 7810..13817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig996.21607.1 ID=prot_Ecto-sp13_S_contig996.21607.1|Name=mRNA_Ecto-sp13_S_contig996.21607.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp
MASGRAAAAPEQQDQASSSSRDRPGDSVAGAARSLLRRRQGCRADRGRDG
AEVELSLLPFPPEVMSLALLYAGGKTLSQAACVSKAVHRVVTAKHWETAA
AESRWLQRPTPDPSSFASPGEATRYWRRWSKLSSGAAGSPPGRVVVVGGN
EISSVEGSDKTEAFVDAPYGKTITWEALPRMSMSRSAAGATVDRFGGVYV
LGGWNSGGALSSCERLTHPLVSARQQRQRGGGLGMNGDTPACAARTPAPA
PAAAAAAAAAVSPAPLQRTTGGENGEFSVSAAAVGAAAAAAAGESDW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037293Gal_Oxidase_central_sf
IPR015915Kelch-typ_b-propeller