prot_Ecto-sp13_S_contig9936.21583.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9936.21583.1
Unique Nameprot_Ecto-sp13_S_contig9936.21583.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length945
Homology
BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Match: A0A6H5KYK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK9_9PHAE)

HSP 1 Score: 1321 bits (3418), Expect = 0.000e+0
Identity = 774/853 (90.74%), Postives = 788/853 (92.38%), Query Frame = 0
Query:   91 TPVSETPAVAPXPVIPTLLPVATPPEPPASSDSLQPVVAPPTASGTVTNAPVNAAQPVAPGTXXXXXXXXXXXXXXXXXXXXATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQGPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAPVVPLLPGQTAAPAARDLPIAGIPTPAPIAGGTARPAAPIVAPVVPGAPTLATTRAPVDPADIPKTPAPVLPPDXXXXXXXXATQPXXXXXXXXXXXXXXXXXVPVATPAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALSVDSEDVQFSSLQFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRRQRMRAKEASRKDFFSSKMMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTRGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQASFYQAGAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEVVRAANSLQSESSPTSSAQMEPPFHGADNEVSGS 943
            TPVSET     X  IPTLLPVATPPEPPA+SDSLQPVVAPPTASG +TNAPV+AAQPVAPGT XXXXXXXXXX         ATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQ PTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAP         AAPAARDLPIAGIPTP PIAGGTARPAAPIVAPVVPGAPTLA+TRAPVDPADIPKTPAPVLPPD   X  XXATQP XXXXXXXXXXXXXXXX       PSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVE TRRSLGGWLTE WNSTSVSPTEG YYLRRRL+ETSDAGFVVTVPG TTSGLIQSINYFQNN+ RVSEAL VDSEDVQFSSLQFSATS SPITEEASNSDVQLVVNPP SDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR QR RAKEASR+DFFSSK+MGSTAGSVSGASGTGSGDEGEYYHNFNPIRT GMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQA+  ++ AATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLG DGQSTTLDWVHGLQPDDLEKFLAEKK+QRMRVLCLDLEPTGIPQQALRD+DEVV AANSLQSESSP SS QME PF GAD+E   S
Sbjct: 1106 TPVSETXXXXXXXXIPTLLPVATPPEPPAASDSLQPVVAPPTASGALTNAPVDAAQPVAPGTTXXXXXXXXXXP--------ATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQEPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAPXXXXXXXXXAAPAARDLPIAGIPTPVPIAGGTARPAAPIVAPVVPGAPTLASTRAPVDPADIPKTPAPVLPPDQLPXTSXXATQPTXXXXXXXXXXXXXXXXXXXXXXXPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEFTRRSLGGWLTEEWNSTSVSPTEGFYYLRRRLDETSDAGFVVTVPGPTTSGLIQSINYFQNNYGRVSEALGVDSEDVQFSSLQFSATSISPITEEASNSDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR-QRRRAKEASRQDFFSSKLMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQAT--RSRAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGADGQSTTLDWVHGLQPDDLEKFLAEKKEQRMRVLCLDLEPTGIPQQALRDDDEVVGAANSLQSESSPASSTQMELPFQGADDETPSS 1947          
BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Match: D8LG77_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG77_ECTSI)

HSP 1 Score: 1217 bits (3150), Expect = 0.000e+0
Identity = 722/818 (88.26%), Postives = 733/818 (89.61%), Query Frame = 0
Query:  126 PVVAPPTASGTVTNAPVNAAQPVAPGTXXXXXXXXXXXXXXXXXXXXATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQGPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAPVVPLLPGQTAAPAARDLPIAGIPTPAPIAGGTARPAAPIVAPVVPGAPTLATTRAPVDPADIPKTPAPVLPPDXXXXXXXXATQPXXXXXXXXXXXXXXXXXVPVATPAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALSVDSEDVQFSSLQFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRRQRMRAKEASRKDFFSSKMMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTRGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQASFYQAGAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEVVRAANSLQSESSPTSSAQMEPPFHGADNEVSGS 943
            PVVAP TAS  VTNAPV+AAQPVAPGT   XXXXX   X        ATAPTAL                    SA IGQ PTVDPIAVVPSPPXXXXXXXXXXXXXXXXXX  TIT SPAAVPGAPTAEPALAP        TAAPAARDLPI GIPTPAPIAGGTARPAAPIVAPVVPGAPTL+ T APVDPADIPKTPAPVLP  XXXXXXXX    XXXXXXXXXXXXXXXXX   ATPAPSTNAPSVSG LTM+ AA+EQCEDGCEVGLANAFDVQPYLVRCSCPEVE++RRSLGGWLTEGWNST+VSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEAL VDSE+VQFSSLQFSATSFSPITEEASN+DVQLVVNPP SDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR QRMRAKEASRKDFFSSKMMGS AGSVSGASGTGSGDEGEYYHNFNPIRT GMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQA       ATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIR KCPQWHEGNVQLMGV LAITFLEYG NSQTLGVD QSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEV+RAANSLQSESSPTSSAQME PF GAD+E   S
Sbjct:  646 PVVAP-TASAAVTNAPVDAAQPVAPGTIPPXXXXXTVPX--------ATAPTALXXXXXXXXXXXXXXXXXXXXSAAIGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXTTTITNSPAAVPGAPTAEPALAPXXXXXXXXTAAPAARDLPITGIPTPAPIAGGTARPAAPIVAPVVPGAPTLSGTTAPVDPADIPKTPAPVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAPSTNAPSVSGALTMSLAAMEQCEDGCEVGLANAFDVQPYLVRCSCPEVEISRRSLGGWLTEGWNSTTVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALGVDSENVQFSSLQFSATSFSPITEEASNNDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR-QRMRAKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQA-------ATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRGKCPQWHEGNVQLMGVSLAITFLEYGFNSQTLGVDAQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEVIRAANSLQSESSPTSSAQMELPFQGADDETPSS 1446          
BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Match: D7G150_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G150_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.710e-52
Identity = 147/349 (42.12%), Postives = 179/349 (51.29%), Query Frame = 0
Query:  300 VAPVVPGAP---------TLATTRAPVDPADIPKTPAPVLPPDXXXXXXXXATQPXXXXXXXXXXXXXXXXXVPVATPAP------------STNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALSVDSEDVQFSSLQFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRRQRMRAKEASRKDFFSSKMMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTRGMLAPHGKAIAPASI 627
            +APVVPG           T      PVDP D  KTPAPVLPP                               PV T AP            S  APSVSG + ++E A+ QCE GC  GLA AFD+QPY V+C CPEV   RRSL   L    N TSV P+EG+Y  RRRL  T++  +VVTVPG TT G++QSIN+FQ N+  VS +L V  ++V FS+L+F A S S I    SN DV L+VNPP S AS  A+GMF++ ++ALLLGTC CL A+L FC                                       G+Y   +  IR RGMLAPH +AI PAS+
Sbjct:  199 MAPVVPGXXXXXXXXXXXTARPANTPVDPVDTFKTPAPVLPP---------------------VLVPTRTPITPVTTAAPLPXXXXXXXXXXSAQAPSVSGFIIVSETALAQCEVGCVEGLAAAFDLQPYRVQCICPEVR--RRSLRSMLANRRNVTSVHPSEGAYLSRRRLT-TAEVPYVVTVPGITTQGMVQSINHFQANYMEVSSSLGVPGDEVVFSTLEFVAASSSHI----SNMDVPLLVNPPASGASTNAIGMFIICILALLLGTCVCLEAVLNFC---------------------------------------GKYCSTYL-IRARGMLAPHHRAIVPASM 479          
BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Match: A0A0G4EB06_VITBC (Methyltransf_11 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EB06_VITBC)

HSP 1 Score: 77.0 bits (188), Expect = 9.010e-11
Identity = 57/233 (24.46%), Postives = 106/233 (45.49%), Query Frame = 0
Query:  655 DPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQASFYQAGAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRM 887
            DP Y  M+G L  +    +   +      RL  +F +A    E+ + +D++  +P IY +L+           ++ LA+ LAP W N+E  + AL   +      ++  FW  L       G  +D +S  D++I  A IV  F G     A +++ + +      +++ +C +W + +VQL+ V LAIT      +  T    G++    W+      +L+  L +++D +M
Sbjct:  336 DP-YEAMMGQL--WTARELEDAERQLVVARLTRDFNRADTESEQESFVDAVKGVPSIYRVLKEMNPVTFPPPLRAKLASLLAPQWKNTEAQQSALRQGLGLEPPSKD--FWLKL-------GQLSDDVSAEDRLIWLADIVPQFTGEPTHDAYVKQMIDVVPLAIDLVKERCQEWSDADVQLVAVDLAIT------DYMTEPPRGRARFYPWLKNFSRGELDDILRKRRDYKM 550          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KYK9_9PHAE0.000e+090.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG77_ECTSI0.000e+088.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G150_ECTSI2.710e-5242.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4EB06_VITBC9.010e-1124.46Methyltransf_11 domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 534..559
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 560..944
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..533
NoneNo IPR availableTMHMMTMhelixcoord: 538..560

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9936contigEcto-sp13_S_contig9936:77..5836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9936.21583.1mRNA_Ecto-sp13_S_contig9936.21583.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9936 77..5836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9936.21583.1 ID=prot_Ecto-sp13_S_contig9936.21583.1|Name=mRNA_Ecto-sp13_S_contig9936.21583.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=945bp
APPATGTAQPVTAPTPTATAPPATGTTQPVTAPTPTATAPPATGTTQPVT
APTPTVTTPPATGTTPPATTPTQPVTAPPVTGTTPPASAPTPVSETPAVA
PTPVIPTLLPVATPPEPPASSDSLQPVVAPPTASGTVTNAPVNAAQPVAP
GTAQPVATGTAQPVAPGTTVPPATAPTALAPSAEPVIGVQPSVPPVAAPS
ATIGQGPTVDPIAVVPSPPPAAVVPSPPPAPVVGAPPTATITTSPAAVPG
APTAEPALAPVVPLLPGQTAAPAARDLPIAGIPTPAPIAGGTARPAAPIV
APVVPGAPTLATTRAPVDPADIPKTPAPVLPPDQLPPTPAPATQPTPAPL
APGSTRAPVPTPVPVATPAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLA
NAFDVQPYLVRCSCPEVEVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRL
EETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALSVDSEDVQFSSL
QFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTC
GCLWAILGFCRRQRMRAKEASRKDFFSSKMMGSTAGSVSGASGTGSGDEG
EYYHNFNPIRTRGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEAT
PPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHA
ILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALE
TAVVYTEAEEEAEFWQGLQASFYQAGAATDSLSRYDQIIVTARIVLMFDG
SSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGL
NSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIP
QQALRDNDEVVRAANSLQSESSPTSSAQMEPPFHGADNEVSGSL*
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