prot_Ecto-sp13_S_contig99307.21579.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig99307.21579.1
Unique Name	prot_Ecto-sp13_S_contig99307.21579.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	80

Homology

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BLAST of mRNA_Ecto-sp13_S_contig99307.21579.1 vs. uniprot
Match: A0A6H5L6K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K1_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 8.950e-23
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 0

Query:   18 IACMGSVSAPPGANQGSQESKRHQAFKTPLKSETRQLSRKKAALCPFVRSSAGGSLGGRRIML 80
            +ACMGSVSAPPGA Q SQ SKRHQA KTPLKSETRQLSR KAAL PFVRSS G SLGGRR +L
Sbjct:    1 MACMGSVSAPPGAIQTSQGSKRHQACKTPLKSETRQLSRNKAALRPFVRSSTGRSLGGRRAIL 63

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BLAST of mRNA_Ecto-sp13_S_contig99307.21579.1 vs. uniprot
Match: A0A6H5JJ82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ82_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 4.480e-14
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 0

Query:   18 IACMGSVSAPPGANQGSQESKRHQAFKTPLKSETRQLSRKKAALCPFVRSSAGGSLGGRRIML 80
            +ACMGSVS+PPGA QGSQ+S+R+QA +   K E R +SRKKAAL   VRSSAG  LGGRR ML
Sbjct:    1 MACMGSVSSPPGAIQGSQQSERYQACEASSKREIRHMSRKKAALHTLVRSSAG--LGGRRAML 61

[Close]

BLAST of mRNA_Ecto-sp13_S_contig99307.21579.1 vs. uniprot
Match: A0A6H5JMJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ2_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.630e-12
Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = 0

Query:   18 IACMGSVSAPPGANQGSQESKRHQAFKTPLKSETRQLSRKKAALCPFVRSSAGGSLGG--RRIML 80
            +ACMGSV  PP A   SQ+S+ +QA K   K ETR++SR+KAAL PFVRSSAG SLGG  RR ML
Sbjct:    1 MACMGSVPFPPSAAHSSQQSESYQACKASSKRETRRMSREKAALRPFVRSSAGRSLGGGGRRAML 65

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig99307.21579.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig99307.21579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5L6K1_9PHAE	8.950e-23	82.54	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5JJ82_9PHAE	4.480e-14	66.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMJ2_9PHAE	1.630e-12	63.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..32
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..80
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..32
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.687

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig99307	contig	Ecto-sp13_S_contig99307:226..465 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig99307.21579.1	mRNA_Ecto-sp13_S_contig99307.21579.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig99307 226..467 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig99307.21579.1 ID=prot_Ecto-sp13_S_contig99307.21579.1|Name=mRNA_Ecto-sp13_S_contig99307.21579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
ASSLLWTFVLVGVASVRIACMGSVSAPPGANQGSQESKRHQAFKTPLKSE
TRQLSRKKAALCPFVRSSAGGSLGGRRIML