prot_Ecto-sp13_S_contig9929.21576.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9929.21576.1
Unique Nameprot_Ecto-sp13_S_contig9929.21576.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length34
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9929.21576.1 vs. uniprot
Match: D7FXN9_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN9_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 2.210e-10
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:    1 MRSYRRWEVPQGPSCTGTGSQSPSAVLNRPNGAD 34
            MRS+R WEVPQ PSCTGTGSQSPSAVLN P+GAD
Sbjct:    1 MRSHRGWEVPQSPSCTGTGSQSPSAVLNGPSGAD 34
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9929.21576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXN9_ECTSI2.210e-1085.29Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9929contigEcto-sp13_S_contig9929:1268..1369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9929.21576.1mRNA_Ecto-sp13_S_contig9929.21576.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9929 1020..1369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9929.21576.1 ID=prot_Ecto-sp13_S_contig9929.21576.1|Name=mRNA_Ecto-sp13_S_contig9929.21576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp
MRSYRRWEVPQGPSCTGTGSQSPSAVLNRPNGAD
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